RNA–Protein interactions for RNA: ENST00000478138.1

ITGB3BP-210, Transcript of integrin subunit beta 3 binding protein, humanhuman

TSL 3

Gene ITGB3BP, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3BP-210ENST00000478138 NISCHQ9Y2I1 1504 aa31.18■■■□□ 2.58
ITGB3BP-210ENST00000478138 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
ITGB3BP-210ENST00000478138 ABCC9O60706 1549 aa27.36■■□□□ 1.97
ITGB3BP-210ENST00000478138 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
ITGB3BP-210ENST00000478138 NACADO15069 1562 aa26.16■■□□□ 1.78
ITGB3BP-210ENST00000478138 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
ITGB3BP-210ENST00000478138 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
ITGB3BP-210ENST00000478138 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
ITGB3BP-210ENST00000478138 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
ITGB3BP-210ENST00000478138 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
ITGB3BP-210ENST00000478138 BICRAQ9NZM4 1560 aa25.59■■□□□ 1.69
ITGB3BP-210ENST00000478138 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
ITGB3BP-210ENST00000478138 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
ITGB3BP-210ENST00000478138 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
ITGB3BP-210ENST00000478138 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
ITGB3BP-210ENST00000478138 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
ITGB3BP-210ENST00000478138 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
ITGB3BP-210ENST00000478138 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
ITGB3BP-210ENST00000478138 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
ITGB3BP-210ENST00000478138 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
ITGB3BP-210ENST00000478138 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.46
ITGB3BP-210ENST00000478138 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
ITGB3BP-210ENST00000478138 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
ITGB3BP-210ENST00000478138 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
ITGB3BP-210ENST00000478138 PEG3Q9GZU2 1588 aa24.07■■□□□ 1.44
ITGB3BP-210ENST00000478138 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
ITGB3BP-210ENST00000478138 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
ITGB3BP-210ENST00000478138 WIZO95785 1651 aa23.79■■□□□ 1.4
ITGB3BP-210ENST00000478138 NESP48681 1621 aa23.67■■□□□ 1.38
ITGB3BP-210ENST00000478138 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
ITGB3BP-210ENST00000478138 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
ITGB3BP-210ENST00000478138 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
ITGB3BP-210ENST00000478138 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
ITGB3BP-210ENST00000478138 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
ITGB3BP-210ENST00000478138 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
ITGB3BP-210ENST00000478138 CUX2O14529 1486 aa23.43■■□□□ 1.34
ITGB3BP-210ENST00000478138 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
ITGB3BP-210ENST00000478138 PDS5BQ9NTI5 1447 aa23.29■■□□□ 1.32
ITGB3BP-210ENST00000478138 CFTRP13569 1480 aa23.26■■□□□ 1.31
ITGB3BP-210ENST00000478138 WDR62O43379 1518 aa23.18■■□□□ 1.3
ITGB3BP-210ENST00000478138 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
ITGB3BP-210ENST00000478138 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
ITGB3BP-210ENST00000478138 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
ITGB3BP-210ENST00000478138 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
ITGB3BP-210ENST00000478138 CEP164Q9UPV0 1460 aa23.14■■□□□ 1.29
ITGB3BP-210ENST00000478138 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
ITGB3BP-210ENST00000478138 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
ITGB3BP-210ENST00000478138 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
ITGB3BP-210ENST00000478138 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
ITGB3BP-210ENST00000478138 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
ITGB3BP-210ENST00000478138 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
ITGB3BP-210ENST00000478138 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
ITGB3BP-210ENST00000478138 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
ITGB3BP-210ENST00000478138 TARBP1Q13395 1621 aaKnown RBP22.63■■□□□ 1.21
ITGB3BP-210ENST00000478138 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
ITGB3BP-210ENST00000478138 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
ITGB3BP-210ENST00000478138 CUX1P39880 1505 aa22.59■■□□□ 1.21
ITGB3BP-210ENST00000478138 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
ITGB3BP-210ENST00000478138 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
ITGB3BP-210ENST00000478138 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
ITGB3BP-210ENST00000478138 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.18
ITGB3BP-210ENST00000478138 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
ITGB3BP-210ENST00000478138 SOGA1O94964 1423 aa22.37■■□□□ 1.17
ITGB3BP-210ENST00000478138 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
ITGB3BP-210ENST00000478138 CHD1O14646 1710 aa22.34■■□□□ 1.17
ITGB3BP-210ENST00000478138 TOP2BQ02880 1626 aa22.32■■□□□ 1.16
ITGB3BP-210ENST00000478138 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
ITGB3BP-210ENST00000478138 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
ITGB3BP-210ENST00000478138 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
ITGB3BP-210ENST00000478138 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
ITGB3BP-210ENST00000478138 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
ITGB3BP-210ENST00000478138 SNAPC4Q5SXM2 1469 aa22.25■■□□□ 1.15
ITGB3BP-210ENST00000478138 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
ITGB3BP-210ENST00000478138 GRIN2BQ13224 1484 aa22.19■■□□□ 1.14
ITGB3BP-210ENST00000478138 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
ITGB3BP-210ENST00000478138 GAPVD1Q14C86 1478 aa22.16■■□□□ 1.14
ITGB3BP-210ENST00000478138 RIMBP3CA6NJZ7 1639 aa22.14■■□□□ 1.14
ITGB3BP-210ENST00000478138 RIMBP3BA6NNM3 1639 aa22.14■■□□□ 1.14
ITGB3BP-210ENST00000478138 RIMBP3Q9UFD9 1639 aa22.14■■□□□ 1.14
ITGB3BP-210ENST00000478138 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
ITGB3BP-210ENST00000478138 ARHGEF11O15085 1522 aa22.1■■□□□ 1.13
ITGB3BP-210ENST00000478138 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
ITGB3BP-210ENST00000478138 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
ITGB3BP-210ENST00000478138 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
ITGB3BP-210ENST00000478138 FBLN2P98095 1184 aa21.98■■□□□ 1.11
ITGB3BP-210ENST00000478138 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
ITGB3BP-210ENST00000478138 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
ITGB3BP-210ENST00000478138 CEP170Q5SW79 1584 aa21.93■■□□□ 1.1
ITGB3BP-210ENST00000478138 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
ITGB3BP-210ENST00000478138 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
ITGB3BP-210ENST00000478138 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.1
ITGB3BP-210ENST00000478138 NUP160Q12769 1436 aa21.89■■□□□ 1.1
ITGB3BP-210ENST00000478138 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
ITGB3BP-210ENST00000478138 ERCC6L2Q5T890 1561 aa21.79■■□□□ 1.08
ITGB3BP-210ENST00000478138 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
ITGB3BP-210ENST00000478138 CUL7Q14999 1698 aa21.77■■□□□ 1.08
ITGB3BP-210ENST00000478138 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
ITGB3BP-210ENST00000478138 IGF1RP08069 1367 aa21.72■■□□□ 1.07
ITGB3BP-210ENST00000478138 CYB5RLQ6IPT4 315 aa21.68■■□□□ 1.06
ITGB3BP-210ENST00000478138 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms