RNA–Protein interactions for RNA: ENST00000478116.1

TBRG4-208, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 2

Gene TBRG4, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-208ENST00000478116 NISCHQ9Y2I1 1504 aa42.8■■■■■ 4.44
TBRG4-208ENST00000478116 ABCC9O60706 1549 aa38.68■■■■□ 3.78
TBRG4-208ENST00000478116 CCDC180Q9P1Z9 1646 aa38.53■■■■□ 3.76
TBRG4-208ENST00000478116 RB1CC1Q8TDY2 1594 aa36.78■■■■□ 3.48
TBRG4-208ENST00000478116 NACADO15069 1562 aa36.48■■■■□ 3.43
TBRG4-208ENST00000478116 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
TBRG4-208ENST00000478116 DCAF8L2P0C7V8 631 aa36.26■■■■□ 3.4
TBRG4-208ENST00000478116 PABPN1Q86U42 306 aaKnown RBP eCLIP35.97■■■■□ 3.35
TBRG4-208ENST00000478116 UNC13AQ9UPW8 1703 aa35.9■■■■□ 3.34
TBRG4-208ENST00000478116 MYO15BQ96JP2 1530 aa35.89■■■■□ 3.34
TBRG4-208ENST00000478116 BICRAQ9NZM4 1560 aa35.64■■■■□ 3.3
TBRG4-208ENST00000478116 ZCCHC6Q5VYS8 1495 aaKnown RBP35.42■■■■□ 3.26
TBRG4-208ENST00000478116 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
TBRG4-208ENST00000478116 SHROOM4Q9ULL8 1493 aa35.23■■■■□ 3.23
TBRG4-208ENST00000478116 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
TBRG4-208ENST00000478116 CC2D2AQ9P2K1 1620 aa34.94■■■■□ 3.18
TBRG4-208ENST00000478116 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
TBRG4-208ENST00000478116 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
TBRG4-208ENST00000478116 NCAPD3P42695 1498 aa33.64■■■□□ 2.98
TBRG4-208ENST00000478116 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
TBRG4-208ENST00000478116 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
TBRG4-208ENST00000478116 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
TBRG4-208ENST00000478116 CUX2O14529 1486 aa33.47■■■□□ 2.95
TBRG4-208ENST00000478116 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
TBRG4-208ENST00000478116 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
TBRG4-208ENST00000478116 HMGXB3Q12766 1538 aa33.4■■■□□ 2.94
TBRG4-208ENST00000478116 BAZ1AQ9NRL2 1556 aaPredicted RBP33.27■■■□□ 2.92
TBRG4-208ENST00000478116 BAZ1BQ9UIG0 1483 aaKnown RBP33.21■■■□□ 2.91
TBRG4-208ENST00000478116 NESP48681 1621 aa33.14■■■□□ 2.9
TBRG4-208ENST00000478116 PEG3Q9GZU2 1588 aa33.11■■■□□ 2.89
TBRG4-208ENST00000478116 LAMC3Q9Y6N6 1575 aa32.96■■■□□ 2.87
TBRG4-208ENST00000478116 MROH2BQ7Z745 1585 aa32.95■■■□□ 2.86
TBRG4-208ENST00000478116 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
TBRG4-208ENST00000478116 PDS5BQ9NTI5 1447 aa32.79■■■□□ 2.84
TBRG4-208ENST00000478116 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
TBRG4-208ENST00000478116 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
TBRG4-208ENST00000478116 WIZO95785 1651 aa32.56■■■□□ 2.8
TBRG4-208ENST00000478116 MRC2Q9UBG0 1479 aa32.49■■■□□ 2.79
TBRG4-208ENST00000478116 WDR62O43379 1518 aa32.4■■■□□ 2.78
TBRG4-208ENST00000478116 CEP164Q9UPV0 1460 aa32.33■■■□□ 2.77
TBRG4-208ENST00000478116 FANCD2Q9BXW9 1451 aa32.26■■■□□ 2.75
TBRG4-208ENST00000478116 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.75
TBRG4-208ENST00000478116 CFTRP13569 1480 aa32.2■■■□□ 2.75
TBRG4-208ENST00000478116 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
TBRG4-208ENST00000478116 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
TBRG4-208ENST00000478116 URB2Q14146 1524 aaKnown RBP31.97■■■□□ 2.71
TBRG4-208ENST00000478116 OSCARQ8IYS5 282 aa31.91■■■□□ 2.7
TBRG4-208ENST00000478116 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
TBRG4-208ENST00000478116 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
TBRG4-208ENST00000478116 IFT140Q96RY7 1462 aa31.69■■■□□ 2.66
TBRG4-208ENST00000478116 TOPBP1Q92547 1522 aa31.61■■■□□ 2.65
TBRG4-208ENST00000478116 ZNF608Q9ULD9 1512 aaPredicted RBP31.6■■■□□ 2.65
TBRG4-208ENST00000478116 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
TBRG4-208ENST00000478116 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
TBRG4-208ENST00000478116 RIMBP3CA6NJZ7 1639 aa31.48■■■□□ 2.63
TBRG4-208ENST00000478116 RIMBP3BA6NNM3 1639 aa31.48■■■□□ 2.63
TBRG4-208ENST00000478116 RIMBP3Q9UFD9 1639 aa31.48■■■□□ 2.63
TBRG4-208ENST00000478116 EIF4G3O43432 1585 aaKnown RBP31.45■■■□□ 2.63
TBRG4-208ENST00000478116 ARHGEF11O15085 1522 aa31.37■■■□□ 2.61
TBRG4-208ENST00000478116 TARBP1Q13395 1621 aaKnown RBP31.34■■■□□ 2.61
TBRG4-208ENST00000478116 AQRO60306 1485 aaKnown RBP eCLIP31.31■■■□□ 2.62e-7■■■■■ 33.2
TBRG4-208ENST00000478116 POLA1P09884 1462 aaPredicted RBP31.27■■■□□ 2.6
TBRG4-208ENST00000478116 CHD1O14646 1710 aa31.27■■■□□ 2.6
TBRG4-208ENST00000478116 FBLN2P98095 1184 aa31.2■■■□□ 2.59
TBRG4-208ENST00000478116 CYB5RLQ6IPT4 315 aa31.16■■■□□ 2.58
TBRG4-208ENST00000478116 SOGA1O94964 1423 aa31.15■■■□□ 2.58
TBRG4-208ENST00000478116 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.58
TBRG4-208ENST00000478116 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
TBRG4-208ENST00000478116 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
TBRG4-208ENST00000478116 FGD5Q6ZNL6 1462 aa31.06■■■□□ 2.56
TBRG4-208ENST00000478116 SUPT5HO00267 1087 aaKnown RBP31.04■■■□□ 2.56
TBRG4-208ENST00000478116 ARAP1Q96P48 1450 aa31.02■■■□□ 2.56
TBRG4-208ENST00000478116 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.55
TBRG4-208ENST00000478116 CUX1P39880 1505 aa30.98■■■□□ 2.55
TBRG4-208ENST00000478116 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
TBRG4-208ENST00000478116 MAGI1Q96QZ7 1491 aaPredicted RBP30.94■■■□□ 2.54
TBRG4-208ENST00000478116 TRHP20396 242 aaPredicted RBP30.92■■■□□ 2.54
TBRG4-208ENST00000478116 GRIN2BQ13224 1484 aa30.92■■■□□ 2.54
TBRG4-208ENST00000478116 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
TBRG4-208ENST00000478116 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
TBRG4-208ENST00000478116 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
TBRG4-208ENST00000478116 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
TBRG4-208ENST00000478116 GAPVD1Q14C86 1478 aa30.77■■■□□ 2.52
TBRG4-208ENST00000478116 ABCA10Q8WWZ4 1543 aa30.7■■■□□ 2.51
TBRG4-208ENST00000478116 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
TBRG4-208ENST00000478116 WRNQ14191 1432 aaPredicted RBP eCLIP30.57■■■□□ 2.48
TBRG4-208ENST00000478116 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
TBRG4-208ENST00000478116 TOP2BQ02880 1626 aa30.46■■■□□ 2.47
TBRG4-208ENST00000478116 BIVM-ERCC5R4GMW8 1640 aa30.46■■■□□ 2.47
TBRG4-208ENST00000478116 ADAMTS12P58397 1594 aa30.45■■■□□ 2.47
TBRG4-208ENST00000478116 NUP160Q12769 1436 aa30.39■■■□□ 2.46
TBRG4-208ENST00000478116 FHAD1B1AJZ9 1412 aa30.38■■■□□ 2.45
TBRG4-208ENST00000478116 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
TBRG4-208ENST00000478116 ERCC6L2Q5T890 1561 aa30.35■■■□□ 2.45
TBRG4-208ENST00000478116 ERICH3Q5RHP9 1530 aa30.33■■■□□ 2.45
TBRG4-208ENST00000478116 SHROOM2Q13796 1616 aa30.28■■■□□ 2.44
TBRG4-208ENST00000478116 AEBP2Q6ZN18 517 aaPredicted RBP30.2■■■□□ 2.43
TBRG4-208ENST00000478116 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
TBRG4-208ENST00000478116 JPH4Q96JJ6 628 aa30.1■■■□□ 2.41
TBRG4-208ENST00000478116 RUSC2Q8N2Y8 1516 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms