RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 NISCHQ9Y2I1 1504 aa42.09■■■■■ 4.33
TRIM13-208ENST00000478111 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
TRIM13-208ENST00000478111 ABCC9O60706 1549 aa37.72■■■■□ 3.63
TRIM13-208ENST00000478111 RB1CC1Q8TDY2 1594 aa35.91■■■■□ 3.34
TRIM13-208ENST00000478111 NACADO15069 1562 aa35.68■■■■□ 3.3
TRIM13-208ENST00000478111 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
TRIM13-208ENST00000478111 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
TRIM13-208ENST00000478111 MYO15BQ96JP2 1530 aa35.22■■■■□ 3.23
TRIM13-208ENST00000478111 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
TRIM13-208ENST00000478111 PABPN1Q86U42 306 aaKnown RBP eCLIP35.13■■■■□ 3.21
TRIM13-208ENST00000478111 BICRAQ9NZM4 1560 aa34.94■■■■□ 3.18
TRIM13-208ENST00000478111 ZCCHC6Q5VYS8 1495 aaKnown RBP34.88■■■■□ 3.17
TRIM13-208ENST00000478111 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.16
TRIM13-208ENST00000478111 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
TRIM13-208ENST00000478111 SCRIBQ14160 1630 aa34.38■■■■□ 3.09
TRIM13-208ENST00000478111 CC2D2AQ9P2K1 1620 aa34.11■■■■□ 3.05
TRIM13-208ENST00000478111 EIF4G1Q04637 1599 aaKnown RBP34.03■■■■□ 3.04
TRIM13-208ENST00000478111 CECR2Q9BXF3 1484 aa33.98■■■■□ 3.03
TRIM13-208ENST00000478111 NCAPD3P42695 1498 aa32.96■■■□□ 2.87
TRIM13-208ENST00000478111 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
TRIM13-208ENST00000478111 SMARCA4P51532 1647 aa32.83■■■□□ 2.85
TRIM13-208ENST00000478111 SMARCA2P51531 1590 aa32.73■■■□□ 2.83
TRIM13-208ENST00000478111 HMGXB3Q12766 1538 aa32.7■■■□□ 2.83
TRIM13-208ENST00000478111 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
TRIM13-208ENST00000478111 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
TRIM13-208ENST00000478111 ERCC6Q03468 1493 aa32.51■■■□□ 2.79
TRIM13-208ENST00000478111 DNAJC5Q9H3Z4 198 aa32.5■■■□□ 2.79
TRIM13-208ENST00000478111 CUX2O14529 1486 aa32.49■■■□□ 2.79
TRIM13-208ENST00000478111 BAZ1BQ9UIG0 1483 aaKnown RBP32.49■■■□□ 2.79
TRIM13-208ENST00000478111 NESP48681 1621 aa32.44■■■□□ 2.78
TRIM13-208ENST00000478111 MROH2BQ7Z745 1585 aa32.44■■■□□ 2.78
TRIM13-208ENST00000478111 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
TRIM13-208ENST00000478111 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
TRIM13-208ENST00000478111 WIZO95785 1651 aa32.05■■■□□ 2.72
TRIM13-208ENST00000478111 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
TRIM13-208ENST00000478111 PDS5BQ9NTI5 1447 aa31.97■■■□□ 2.71
TRIM13-208ENST00000478111 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
TRIM13-208ENST00000478111 RSF1Q96T23 1441 aaPredicted RBP31.76■■■□□ 2.68
TRIM13-208ENST00000478111 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
TRIM13-208ENST00000478111 WDR62O43379 1518 aa31.66■■■□□ 2.66
TRIM13-208ENST00000478111 TOP2AP11388 1531 aaKnown RBP31.62■■■□□ 2.65
TRIM13-208ENST00000478111 CFTRP13569 1480 aa31.59■■■□□ 2.65
TRIM13-208ENST00000478111 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
TRIM13-208ENST00000478111 FANCD2Q9BXW9 1451 aa31.56■■■□□ 2.64
TRIM13-208ENST00000478111 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
TRIM13-208ENST00000478111 PRDM2Q13029 1718 aa31.31■■■□□ 2.6
TRIM13-208ENST00000478111 CCDC88BA6NC98 1476 aa31.28■■■□□ 2.6
TRIM13-208ENST00000478111 TRIM41Q8WV44 630 aa31.02■■■□□ 2.56
TRIM13-208ENST00000478111 OSCARQ8IYS5 282 aa31.01■■■□□ 2.55
TRIM13-208ENST00000478111 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
TRIM13-208ENST00000478111 IFT140Q96RY7 1462 aa30.95■■■□□ 2.55
TRIM13-208ENST00000478111 ZNF608Q9ULD9 1512 aaPredicted RBP30.94■■■□□ 2.54
TRIM13-208ENST00000478111 ABCC8Q09428 1581 aa30.89■■■□□ 2.54
TRIM13-208ENST00000478111 DNMBPQ6XZF7 1577 aa30.86■■■□□ 2.53
TRIM13-208ENST00000478111 EIF4G3O43432 1585 aaKnown RBP30.76■■■□□ 2.52
TRIM13-208ENST00000478111 TARBP1Q13395 1621 aaKnown RBP30.75■■■□□ 2.51
TRIM13-208ENST00000478111 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
TRIM13-208ENST00000478111 AQRO60306 1485 aaKnown RBP eCLIP30.66■■■□□ 2.56e-15■■■■■ 98.7
TRIM13-208ENST00000478111 RIMBP3CA6NJZ7 1639 aa30.65■■■□□ 2.5
TRIM13-208ENST00000478111 RIMBP3BA6NNM3 1639 aa30.65■■■□□ 2.5
TRIM13-208ENST00000478111 RIMBP3Q9UFD9 1639 aa30.65■■■□□ 2.5
TRIM13-208ENST00000478111 RAD54L2Q9Y4B4 1467 aa30.57■■■□□ 2.48
TRIM13-208ENST00000478111 CHD1O14646 1710 aa30.56■■■□□ 2.48
TRIM13-208ENST00000478111 ARHGEF11O15085 1522 aa30.53■■■□□ 2.48
TRIM13-208ENST00000478111 SOGA1O94964 1423 aa30.51■■■□□ 2.47
TRIM13-208ENST00000478111 FGD5Q6ZNL6 1462 aa30.47■■■□□ 2.47
TRIM13-208ENST00000478111 CUX1P39880 1505 aa30.47■■■□□ 2.47
TRIM13-208ENST00000478111 TDRD9Q8NDG6 1382 aaKnown RBP30.46■■■□□ 2.47
TRIM13-208ENST00000478111 WDR97A6NE52 1622 aa30.38■■■□□ 2.45
TRIM13-208ENST00000478111 FBLN2P98095 1184 aa30.38■■■□□ 2.45
TRIM13-208ENST00000478111 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
TRIM13-208ENST00000478111 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
TRIM13-208ENST00000478111 CYB5RLQ6IPT4 315 aa30.29■■■□□ 2.44
TRIM13-208ENST00000478111 ARAP1Q96P48 1450 aa30.25■■■□□ 2.43
TRIM13-208ENST00000478111 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
TRIM13-208ENST00000478111 MAGI1Q96QZ7 1491 aaPredicted RBP30.24■■■□□ 2.43
TRIM13-208ENST00000478111 CLASP1Q7Z460 1538 aa30.2■■■□□ 2.42
TRIM13-208ENST00000478111 CHMP7Q8WUX9 453 aaPredicted RBP30.18■■■□□ 2.42
TRIM13-208ENST00000478111 PBRM1Q86U86 1689 aa30.16■■■□□ 2.42
TRIM13-208ENST00000478111 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
TRIM13-208ENST00000478111 GAPVD1Q14C86 1478 aa30.14■■■□□ 2.42
TRIM13-208ENST00000478111 ABCA10Q8WWZ4 1543 aa30.13■■■□□ 2.41
TRIM13-208ENST00000478111 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
TRIM13-208ENST00000478111 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
TRIM13-208ENST00000478111 BIVM-ERCC5R4GMW8 1640 aa30■■■□□ 2.39
TRIM13-208ENST00000478111 TOP2BQ02880 1626 aa29.98■■■□□ 2.39
TRIM13-208ENST00000478111 WRNQ14191 1432 aaPredicted RBP eCLIP29.97■■■□□ 2.39
TRIM13-208ENST00000478111 TRHP20396 242 aaPredicted RBP29.9■■■□□ 2.38
TRIM13-208ENST00000478111 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
TRIM13-208ENST00000478111 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
TRIM13-208ENST00000478111 CEP170Q5SW79 1584 aa29.78■■■□□ 2.36
TRIM13-208ENST00000478111 NUP160Q12769 1436 aa29.78■■■□□ 2.36
TRIM13-208ENST00000478111 FHAD1B1AJZ9 1412 aa29.75■■■□□ 2.35
TRIM13-208ENST00000478111 ERCC6L2Q5T890 1561 aa29.75■■■□□ 2.35
TRIM13-208ENST00000478111 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
TRIM13-208ENST00000478111 SHROOM2Q13796 1616 aa29.67■■■□□ 2.34
TRIM13-208ENST00000478111 PRG4Q92954 1404 aaPredicted RBP29.46■■■□□ 2.31
TRIM13-208ENST00000478111 JPH4Q96JJ6 628 aa29.45■■■□□ 2.31
TRIM13-208ENST00000478111 RUSC2Q8N2Y8 1516 aa29.44■■■□□ 2.3
TRIM13-208ENST00000478111 IGF1RP08069 1367 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms