RNA–Protein interactions for RNA: ENST00000478100.3

NCBP1-203, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-203ENST00000478100 NISCHQ9Y2I1 1504 aa45.23■■■■■ 4.83
NCBP1-203ENST00000478100 CCDC180Q9P1Z9 1646 aa40.18■■■■■ 4.02
NCBP1-203ENST00000478100 ABCC9O60706 1549 aa39.54■■■■□ 3.92
NCBP1-203ENST00000478100 RB1CC1Q8TDY2 1594 aa37.93■■■■□ 3.66
NCBP1-203ENST00000478100 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
NCBP1-203ENST00000478100 NACADO15069 1562 aa37.88■■■■□ 3.65
NCBP1-203ENST00000478100 ZCCHC6Q5VYS8 1495 aaKnown RBP37.63■■■■□ 3.61
NCBP1-203ENST00000478100 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
NCBP1-203ENST00000478100 DCAF1Q9Y4B6 1507 aa37.41■■■■□ 3.58
NCBP1-203ENST00000478100 UNC13AQ9UPW8 1703 aa37.05■■■■□ 3.52
NCBP1-203ENST00000478100 PABPN1Q86U42 306 aaKnown RBP eCLIP36.99■■■■□ 3.51
NCBP1-203ENST00000478100 BICRAQ9NZM4 1560 aa36.84■■■■□ 3.49
NCBP1-203ENST00000478100 SCRIBQ14160 1630 aa36.68■■■■□ 3.46
NCBP1-203ENST00000478100 DNAJC5BQ9UF47 199 aa36.55■■■■□ 3.44
NCBP1-203ENST00000478100 SHROOM4Q9ULL8 1493 aa36.38■■■■□ 3.41
NCBP1-203ENST00000478100 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
NCBP1-203ENST00000478100 CC2D2AQ9P2K1 1620 aa35.75■■■■□ 3.31
NCBP1-203ENST00000478100 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
NCBP1-203ENST00000478100 SMARCA4P51532 1647 aa35.09■■■■□ 3.21
NCBP1-203ENST00000478100 BAZ1AQ9NRL2 1556 aaPredicted RBP35.03■■■■□ 3.2
NCBP1-203ENST00000478100 NCAPD3P42695 1498 aa35.01■■■■□ 3.19
NCBP1-203ENST00000478100 ATAD2BQ9ULI0 1458 aa34.99■■■■□ 3.19
NCBP1-203ENST00000478100 SMARCA2P51531 1590 aa34.88■■■■□ 3.17
NCBP1-203ENST00000478100 MROH2BQ7Z745 1585 aa34.87■■■■□ 3.17
NCBP1-203ENST00000478100 PEG3Q9GZU2 1588 aa34.78■■■■□ 3.16
NCBP1-203ENST00000478100 HMGXB3Q12766 1538 aa34.75■■■■□ 3.15
NCBP1-203ENST00000478100 BAZ1BQ9UIG0 1483 aaKnown RBP34.65■■■■□ 3.14
NCBP1-203ENST00000478100 WIZO95785 1651 aa34.45■■■■□ 3.11
NCBP1-203ENST00000478100 RSF1Q96T23 1441 aaPredicted RBP34.44■■■■□ 3.1
NCBP1-203ENST00000478100 NESP48681 1621 aa34.19■■■■□ 3.06
NCBP1-203ENST00000478100 TOP2AP11388 1531 aaKnown RBP34.06■■■■□ 3.04
NCBP1-203ENST00000478100 ERCC6Q03468 1493 aa34.05■■■■□ 3.04
NCBP1-203ENST00000478100 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
NCBP1-203ENST00000478100 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
NCBP1-203ENST00000478100 PDS5BQ9NTI5 1447 aa33.85■■■■□ 3.01
NCBP1-203ENST00000478100 CUX2O14529 1486 aa33.76■■■■□ 3
NCBP1-203ENST00000478100 CFTRP13569 1480 aa33.74■■■□□ 2.99
NCBP1-203ENST00000478100 CCDC88BA6NC98 1476 aa33.72■■■□□ 2.99
NCBP1-203ENST00000478100 KIF21AQ7Z4S6 1674 aa33.71■■■□□ 2.99
NCBP1-203ENST00000478100 THOC2Q8NI27 1593 aaKnown RBP33.65■■■□□ 2.98
NCBP1-203ENST00000478100 FANCD2Q9BXW9 1451 aa33.55■■■□□ 2.96
NCBP1-203ENST00000478100 MRC2Q9UBG0 1479 aa33.49■■■□□ 2.95
NCBP1-203ENST00000478100 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
NCBP1-203ENST00000478100 SUPT5HO00267 1087 aaKnown RBP33.45■■■□□ 2.95
NCBP1-203ENST00000478100 WDR62O43379 1518 aa33.38■■■□□ 2.93
NCBP1-203ENST00000478100 PRDM2Q13029 1718 aa33.33■■■□□ 2.93
NCBP1-203ENST00000478100 URB2Q14146 1524 aaKnown RBP33.23■■■□□ 2.91
NCBP1-203ENST00000478100 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
NCBP1-203ENST00000478100 TOPBP1Q92547 1522 aa33■■■□□ 2.87
NCBP1-203ENST00000478100 ABCC8Q09428 1581 aa32.98■■■□□ 2.87
NCBP1-203ENST00000478100 DNMBPQ6XZF7 1577 aa32.92■■■□□ 2.86
NCBP1-203ENST00000478100 IFT140Q96RY7 1462 aa32.82■■■□□ 2.84
NCBP1-203ENST00000478100 ZNF608Q9ULD9 1512 aaPredicted RBP32.72■■■□□ 2.83
NCBP1-203ENST00000478100 POLA1P09884 1462 aaPredicted RBP32.71■■■□□ 2.83
NCBP1-203ENST00000478100 CUX1P39880 1505 aa32.7■■■□□ 2.83
NCBP1-203ENST00000478100 TARBP1Q13395 1621 aaKnown RBP32.64■■■□□ 2.82
NCBP1-203ENST00000478100 FGD5Q6ZNL6 1462 aa32.6■■■□□ 2.81
NCBP1-203ENST00000478100 RAD54L2Q9Y4B4 1467 aa32.6■■■□□ 2.81
NCBP1-203ENST00000478100 SOGA1O94964 1423 aa32.6■■■□□ 2.81
NCBP1-203ENST00000478100 AQRO60306 1485 aaKnown RBP eCLIP32.53■■■□□ 2.82e-6■■■■■ 38
NCBP1-203ENST00000478100 EIF4G3O43432 1585 aaKnown RBP32.5■■■□□ 2.79
NCBP1-203ENST00000478100 TDRD9Q8NDG6 1382 aaKnown RBP32.45■■■□□ 2.78
NCBP1-203ENST00000478100 WRNQ14191 1432 aaPredicted RBP eCLIP32.43■■■□□ 2.78
NCBP1-203ENST00000478100 OSCARQ8IYS5 282 aa32.42■■■□□ 2.78
NCBP1-203ENST00000478100 TOP2BQ02880 1626 aa32.36■■■□□ 2.77
NCBP1-203ENST00000478100 SYNJ1O43426 1573 aa32.35■■■□□ 2.77
NCBP1-203ENST00000478100 BIVM-ERCC5R4GMW8 1640 aa32.33■■■□□ 2.77
NCBP1-203ENST00000478100 WDR97A6NE52 1622 aa32.33■■■□□ 2.77
NCBP1-203ENST00000478100 ABCA10Q8WWZ4 1543 aa32.29■■■□□ 2.76
NCBP1-203ENST00000478100 GRIN2BQ13224 1484 aa32.2■■■□□ 2.75
NCBP1-203ENST00000478100 GAPVD1Q14C86 1478 aa32.2■■■□□ 2.75
NCBP1-203ENST00000478100 SNAPC4Q5SXM2 1469 aa32.17■■■□□ 2.74
NCBP1-203ENST00000478100 FBLN2P98095 1184 aa32.15■■■□□ 2.74
NCBP1-203ENST00000478100 ABCA5Q8WWZ7 1642 aa32.13■■■□□ 2.73
NCBP1-203ENST00000478100 MAGI1Q96QZ7 1491 aaPredicted RBP32.12■■■□□ 2.73
NCBP1-203ENST00000478100 CHD1O14646 1710 aa32.11■■■□□ 2.73
NCBP1-203ENST00000478100 PBRM1Q86U86 1689 aa32.05■■■□□ 2.72
NCBP1-203ENST00000478100 CHMP7Q8WUX9 453 aaPredicted RBP32.05■■■□□ 2.72
NCBP1-203ENST00000478100 SYNJ2O15056 1496 aa32.01■■■□□ 2.71
NCBP1-203ENST00000478100 ERICH3Q5RHP9 1530 aa31.89■■■□□ 2.7
NCBP1-203ENST00000478100 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
NCBP1-203ENST00000478100 RIMBP3CA6NJZ7 1639 aa31.82■■■□□ 2.69
NCBP1-203ENST00000478100 RIMBP3BA6NNM3 1639 aa31.82■■■□□ 2.69
NCBP1-203ENST00000478100 RIMBP3Q9UFD9 1639 aa31.82■■■□□ 2.69
NCBP1-203ENST00000478100 ADAMTS12P58397 1594 aa31.82■■■□□ 2.68
NCBP1-203ENST00000478100 ARHGEF11O15085 1522 aa31.82■■■□□ 2.68
NCBP1-203ENST00000478100 CLASP1Q7Z460 1538 aa31.81■■■□□ 2.68
NCBP1-203ENST00000478100 TRIM41Q8WV44 630 aa31.8■■■□□ 2.68
NCBP1-203ENST00000478100 GRIN2AQ12879 1464 aa31.78■■■□□ 2.68
NCBP1-203ENST00000478100 KIF27Q86VH2 1401 aa31.76■■■□□ 2.68
NCBP1-203ENST00000478100 IGF1RP08069 1367 aa31.73■■■□□ 2.67
NCBP1-203ENST00000478100 NUP160Q12769 1436 aa31.68■■■□□ 2.66
NCBP1-203ENST00000478100 CEP170Q5SW79 1584 aa31.63■■■□□ 2.65
NCBP1-203ENST00000478100 CYB5RLQ6IPT4 315 aa31.6■■■□□ 2.65
NCBP1-203ENST00000478100 ARAP1Q96P48 1450 aa31.57■■■□□ 2.64
NCBP1-203ENST00000478100 CUL7Q14999 1698 aa31.51■■■□□ 2.64
NCBP1-203ENST00000478100 CARMIL1Q5VZK9 1371 aa31.51■■■□□ 2.63
NCBP1-203ENST00000478100 RUSC2Q8N2Y8 1516 aa31.49■■■□□ 2.63
NCBP1-203ENST00000478100 SHROOM2Q13796 1616 aa31.42■■■□□ 2.62
NCBP1-203ENST00000478100 JPH4Q96JJ6 628 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms