RNA–Protein interactions for RNA: ENST00000478096.1

CPA1-204, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 852 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-204ENST00000478096 NISCHQ9Y2I1 1504 aa46.17■■■■■ 4.98
CPA1-204ENST00000478096 ABCC9O60706 1549 aa41.52■■■■■ 4.24
CPA1-204ENST00000478096 CCDC180Q9P1Z9 1646 aa41.4■■■■■ 4.22
CPA1-204ENST00000478096 RB1CC1Q8TDY2 1594 aa39.48■■■■□ 3.91
CPA1-204ENST00000478096 DNAJC5BQ9UF47 199 aa39.24■■■■□ 3.87
CPA1-204ENST00000478096 NACADO15069 1562 aa39.24■■■■□ 3.87
CPA1-204ENST00000478096 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
CPA1-204ENST00000478096 MYO15BQ96JP2 1530 aa38.76■■■■□ 3.8
CPA1-204ENST00000478096 PABPN1Q86U42 306 aaKnown RBP eCLIP38.69■■■■□ 3.78
CPA1-204ENST00000478096 UNC13AQ9UPW8 1703 aa38.51■■■■□ 3.76
CPA1-204ENST00000478096 BICRAQ9NZM4 1560 aa38.4■■■■□ 3.74
CPA1-204ENST00000478096 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
CPA1-204ENST00000478096 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
CPA1-204ENST00000478096 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
CPA1-204ENST00000478096 SCRIBQ14160 1630 aa37.63■■■■□ 3.61
CPA1-204ENST00000478096 CC2D2AQ9P2K1 1620 aa37.5■■■■□ 3.59
CPA1-204ENST00000478096 CECR2Q9BXF3 1484 aa37.45■■■■□ 3.59
CPA1-204ENST00000478096 EIF4G1Q04637 1599 aaKnown RBP37.42■■■■□ 3.58
CPA1-204ENST00000478096 NCAPD3P42695 1498 aa36.31■■■■□ 3.4
CPA1-204ENST00000478096 DNAJC5Q9H3Z4 198 aa36.13■■■■□ 3.37
CPA1-204ENST00000478096 ATAD2BQ9ULI0 1458 aa36.12■■■■□ 3.37
CPA1-204ENST00000478096 SMARCA4P51532 1647 aa35.97■■■■□ 3.35
CPA1-204ENST00000478096 SMARCA2P51531 1590 aa35.96■■■■□ 3.35
CPA1-204ENST00000478096 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
CPA1-204ENST00000478096 CUX2O14529 1486 aa35.9■■■■□ 3.34
CPA1-204ENST00000478096 ERCC6Q03468 1493 aa35.81■■■■□ 3.32
CPA1-204ENST00000478096 BAZ1AQ9NRL2 1556 aaPredicted RBP35.8■■■■□ 3.32
CPA1-204ENST00000478096 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
CPA1-204ENST00000478096 BAZ1BQ9UIG0 1483 aaKnown RBP35.68■■■■□ 3.3
CPA1-204ENST00000478096 NESP48681 1621 aa35.65■■■■□ 3.3
CPA1-204ENST00000478096 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
CPA1-204ENST00000478096 LAMC3Q9Y6N6 1575 aa35.4■■■■□ 3.26
CPA1-204ENST00000478096 THOC2Q8NI27 1593 aaKnown RBP35.29■■■■□ 3.24
CPA1-204ENST00000478096 PDS5BQ9NTI5 1447 aa35.24■■■■□ 3.23
CPA1-204ENST00000478096 CADPSQ9ULU8 1353 aa35.17■■■■□ 3.22
CPA1-204ENST00000478096 KIF21AQ7Z4S6 1674 aa35.1■■■■□ 3.21
CPA1-204ENST00000478096 WIZO95785 1651 aa35.04■■■■□ 3.2
CPA1-204ENST00000478096 MRC2Q9UBG0 1479 aa34.9■■■■□ 3.18
CPA1-204ENST00000478096 WDR62O43379 1518 aa34.83■■■■□ 3.17
CPA1-204ENST00000478096 RSF1Q96T23 1441 aaPredicted RBP34.82■■■■□ 3.17
CPA1-204ENST00000478096 CFTRP13569 1480 aa34.74■■■■□ 3.15
CPA1-204ENST00000478096 CEP164Q9UPV0 1460 aa34.71■■■■□ 3.15
CPA1-204ENST00000478096 FANCD2Q9BXW9 1451 aa34.7■■■■□ 3.15
CPA1-204ENST00000478096 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
CPA1-204ENST00000478096 URB2Q14146 1524 aaKnown RBP34.43■■■■□ 3.1
CPA1-204ENST00000478096 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
CPA1-204ENST00000478096 CCDC88BA6NC98 1476 aa34.3■■■■□ 3.08
CPA1-204ENST00000478096 OSCARQ8IYS5 282 aa34.29■■■■□ 3.08
CPA1-204ENST00000478096 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
CPA1-204ENST00000478096 IFT140Q96RY7 1462 aa34.07■■■■□ 3.05
CPA1-204ENST00000478096 TOPBP1Q92547 1522 aa34.03■■■■□ 3.04
CPA1-204ENST00000478096 ZNF608Q9ULD9 1512 aaPredicted RBP34.02■■■■□ 3.04
CPA1-204ENST00000478096 ABCC8Q09428 1581 aa33.99■■■■□ 3.03
CPA1-204ENST00000478096 DNMBPQ6XZF7 1577 aa33.86■■■■□ 3.01
CPA1-204ENST00000478096 TARBP1Q13395 1621 aaKnown RBP33.74■■■□□ 2.99
CPA1-204ENST00000478096 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
CPA1-204ENST00000478096 RIMBP3CA6NJZ7 1639 aa33.73■■■□□ 2.99
CPA1-204ENST00000478096 RIMBP3BA6NNM3 1639 aa33.73■■■□□ 2.99
CPA1-204ENST00000478096 RIMBP3Q9UFD9 1639 aa33.73■■■□□ 2.99
CPA1-204ENST00000478096 AQRO60306 1485 aaKnown RBP eCLIP33.71■■■□□ 2.99
CPA1-204ENST00000478096 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
CPA1-204ENST00000478096 ARHGEF11O15085 1522 aa33.65■■■□□ 2.98
CPA1-204ENST00000478096 SOGA1O94964 1423 aa33.55■■■□□ 2.96
CPA1-204ENST00000478096 RAD54L2Q9Y4B4 1467 aa33.55■■■□□ 2.96
CPA1-204ENST00000478096 TDRD9Q8NDG6 1382 aaKnown RBP33.48■■■□□ 2.95
CPA1-204ENST00000478096 CHD1O14646 1710 aa33.47■■■□□ 2.95
CPA1-204ENST00000478096 CYB5RLQ6IPT4 315 aa33.45■■■□□ 2.95
CPA1-204ENST00000478096 FBLN2P98095 1184 aa33.44■■■□□ 2.94
CPA1-204ENST00000478096 FGD5Q6ZNL6 1462 aa33.42■■■□□ 2.94
CPA1-204ENST00000478096 CUX1P39880 1505 aa33.39■■■□□ 2.94
CPA1-204ENST00000478096 WDR97A6NE52 1622 aa33.39■■■□□ 2.93
CPA1-204ENST00000478096 ARAP1Q96P48 1450 aa33.32■■■□□ 2.92
CPA1-204ENST00000478096 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
CPA1-204ENST00000478096 MAGI1Q96QZ7 1491 aaPredicted RBP33.26■■■□□ 2.92
CPA1-204ENST00000478096 GRIN2BQ13224 1484 aa33.25■■■□□ 2.91
CPA1-204ENST00000478096 CHMP7Q8WUX9 453 aaPredicted RBP33.24■■■□□ 2.91
CPA1-204ENST00000478096 CLASP1Q7Z460 1538 aa33.21■■■□□ 2.91
CPA1-204ENST00000478096 SYNJ2O15056 1496 aa33.16■■■□□ 2.9
CPA1-204ENST00000478096 SYNJ1O43426 1573 aa33.12■■■□□ 2.89
CPA1-204ENST00000478096 GAPVD1Q14C86 1478 aa33.11■■■□□ 2.89
CPA1-204ENST00000478096 ABCA10Q8WWZ4 1543 aa33.09■■■□□ 2.89
CPA1-204ENST00000478096 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
CPA1-204ENST00000478096 TRHP20396 242 aaPredicted RBP33.04■■■□□ 2.88
CPA1-204ENST00000478096 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
CPA1-204ENST00000478096 PBRM1Q86U86 1689 aa32.97■■■□□ 2.87
CPA1-204ENST00000478096 WRNQ14191 1432 aaPredicted RBP eCLIP32.93■■■□□ 2.86
CPA1-204ENST00000478096 GRIN2AQ12879 1464 aa32.81■■■□□ 2.84
CPA1-204ENST00000478096 TOP2BQ02880 1626 aa32.81■■■□□ 2.84
CPA1-204ENST00000478096 BIVM-ERCC5R4GMW8 1640 aa32.78■■■□□ 2.84
CPA1-204ENST00000478096 NUP160Q12769 1436 aa32.77■■■□□ 2.84
CPA1-204ENST00000478096 ADAMTS12P58397 1594 aa32.72■■■□□ 2.83
CPA1-204ENST00000478096 FHAD1B1AJZ9 1412 aa32.71■■■□□ 2.83
CPA1-204ENST00000478096 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
CPA1-204ENST00000478096 ERCC6L2Q5T890 1561 aa32.66■■■□□ 2.82
CPA1-204ENST00000478096 ERICH3Q5RHP9 1530 aa32.65■■■□□ 2.82
CPA1-204ENST00000478096 SHROOM2Q13796 1616 aa32.58■■■□□ 2.81
CPA1-204ENST00000478096 JPH4Q96JJ6 628 aa32.46■■■□□ 2.79
CPA1-204ENST00000478096 PRG4Q92954 1404 aaPredicted RBP32.41■■■□□ 2.78
CPA1-204ENST00000478096 IGF1RP08069 1367 aa32.3■■■□□ 2.76
CPA1-204ENST00000478096 RUSC2Q8N2Y8 1516 aa32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms