RNA–Protein interactions for RNA: ENST00000478094.1

SMS-204, Transcript of spermine synthase, humanhuman

TSL 4

Gene SMS, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-204ENST00000478094 NISCHQ9Y2I1 1504 aa30.59■■■□□ 2.49
SMS-204ENST00000478094 ABCC9O60706 1549 aa28.22■■■□□ 2.11
SMS-204ENST00000478094 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
SMS-204ENST00000478094 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
SMS-204ENST00000478094 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
SMS-204ENST00000478094 NACADO15069 1562 aa26.35■■□□□ 1.81
SMS-204ENST00000478094 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
SMS-204ENST00000478094 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
SMS-204ENST00000478094 DCAF8L2P0C7V8 631 aa25.96■■□□□ 1.75
SMS-204ENST00000478094 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
SMS-204ENST00000478094 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.73
SMS-204ENST00000478094 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
SMS-204ENST00000478094 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
SMS-204ENST00000478094 CC2D2AQ9P2K1 1620 aa25.49■■□□□ 1.67
SMS-204ENST00000478094 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
SMS-204ENST00000478094 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
SMS-204ENST00000478094 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
SMS-204ENST00000478094 DNAJC5Q9H3Z4 198 aa25.23■■□□□ 1.63
SMS-204ENST00000478094 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
SMS-204ENST00000478094 CUX2O14529 1486 aa24.63■■□□□ 1.53
SMS-204ENST00000478094 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
SMS-204ENST00000478094 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
SMS-204ENST00000478094 ATAD2BQ9ULI0 1458 aa24.15■■□□□ 1.46
SMS-204ENST00000478094 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
SMS-204ENST00000478094 SMARCA2P51531 1590 aa24.08■■□□□ 1.44
SMS-204ENST00000478094 NESP48681 1621 aa24.07■■□□□ 1.44
SMS-204ENST00000478094 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
SMS-204ENST00000478094 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
SMS-204ENST00000478094 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
SMS-204ENST00000478094 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
SMS-204ENST00000478094 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
SMS-204ENST00000478094 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
SMS-204ENST00000478094 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
SMS-204ENST00000478094 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
SMS-204ENST00000478094 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
SMS-204ENST00000478094 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
SMS-204ENST00000478094 WDR62O43379 1518 aa23.54■■□□□ 1.36
SMS-204ENST00000478094 CADPSQ9ULU8 1353 aa23.54■■□□□ 1.36
SMS-204ENST00000478094 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
SMS-204ENST00000478094 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
SMS-204ENST00000478094 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
SMS-204ENST00000478094 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
SMS-204ENST00000478094 WIZO95785 1651 aa23.22■■□□□ 1.31
SMS-204ENST00000478094 CFTRP13569 1480 aa23.17■■□□□ 1.3
SMS-204ENST00000478094 RIMBP3CA6NJZ7 1639 aa23.13■■□□□ 1.29
SMS-204ENST00000478094 RIMBP3BA6NNM3 1639 aa23.13■■□□□ 1.29
SMS-204ENST00000478094 RIMBP3Q9UFD9 1639 aa23.13■■□□□ 1.29
SMS-204ENST00000478094 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
SMS-204ENST00000478094 ARHGEF11O15085 1522 aa23■■□□□ 1.27
SMS-204ENST00000478094 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
SMS-204ENST00000478094 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
SMS-204ENST00000478094 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
SMS-204ENST00000478094 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
SMS-204ENST00000478094 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
SMS-204ENST00000478094 CYB5RLQ6IPT4 315 aa22.82■■□□□ 1.24
SMS-204ENST00000478094 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
SMS-204ENST00000478094 TOPBP1Q92547 1522 aa22.77■■□□□ 1.24
SMS-204ENST00000478094 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
SMS-204ENST00000478094 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
SMS-204ENST00000478094 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
SMS-204ENST00000478094 CHD1O14646 1710 aa22.7■■□□□ 1.22
SMS-204ENST00000478094 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
SMS-204ENST00000478094 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.22
SMS-204ENST00000478094 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
SMS-204ENST00000478094 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
SMS-204ENST00000478094 FBLN2P98095 1184 aa22.56■■□□□ 1.2
SMS-204ENST00000478094 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
SMS-204ENST00000478094 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
SMS-204ENST00000478094 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
SMS-204ENST00000478094 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
SMS-204ENST00000478094 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
SMS-204ENST00000478094 SYNJ1O43426 1573 aa22.39■■□□□ 1.18
SMS-204ENST00000478094 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
SMS-204ENST00000478094 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
SMS-204ENST00000478094 SOGA1O94964 1423 aa22.37■■□□□ 1.17
SMS-204ENST00000478094 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
SMS-204ENST00000478094 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
SMS-204ENST00000478094 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
SMS-204ENST00000478094 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
SMS-204ENST00000478094 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
SMS-204ENST00000478094 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
SMS-204ENST00000478094 CUX1P39880 1505 aa22.16■■□□□ 1.14
SMS-204ENST00000478094 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
SMS-204ENST00000478094 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
SMS-204ENST00000478094 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
SMS-204ENST00000478094 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
SMS-204ENST00000478094 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
SMS-204ENST00000478094 CEP170Q5SW79 1584 aa21.96■■□□□ 1.11
SMS-204ENST00000478094 NUP160Q12769 1436 aa21.94■■□□□ 1.1
SMS-204ENST00000478094 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
SMS-204ENST00000478094 KIF13AQ9H1H9 1805 aa21.91■■□□□ 1.1
SMS-204ENST00000478094 ADAMTS12P58397 1594 aa21.9■■□□□ 1.1
SMS-204ENST00000478094 FHAD1B1AJZ9 1412 aa21.81■■□□□ 1.08
SMS-204ENST00000478094 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
SMS-204ENST00000478094 ABCC10Q5T3U5 1492 aa21.75■■□□□ 1.07
SMS-204ENST00000478094 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
SMS-204ENST00000478094 ERICH3Q5RHP9 1530 aa21.73■■□□□ 1.07
SMS-204ENST00000478094 FAM69CQ0P6D2 419 aa21.71■■□□□ 1.07
SMS-204ENST00000478094 MAPKBP1O60336 1514 aa21.7■■□□□ 1.07
SMS-204ENST00000478094 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms