RNA–Protein interactions for RNA: ENST00000478074.5

KNDC1-203, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

TSL 3

Gene KNDC1, Length 639 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-203ENST00000478074 NISCHQ9Y2I1 1504 aa40.08■■■■■ 4.01
KNDC1-203ENST00000478074 CCDC180Q9P1Z9 1646 aa35.92■■■■□ 3.34
KNDC1-203ENST00000478074 ABCC9O60706 1549 aa35.72■■■■□ 3.31
KNDC1-203ENST00000478074 RB1CC1Q8TDY2 1594 aa34.13■■■■□ 3.05
KNDC1-203ENST00000478074 NACADO15069 1562 aa33.94■■■■□ 3.02
KNDC1-203ENST00000478074 DCAF8L2P0C7V8 631 aa33.76■■■□□ 2.99
KNDC1-203ENST00000478074 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
KNDC1-203ENST00000478074 DNAJC5BQ9UF47 199 aa33.32■■■□□ 2.92
KNDC1-203ENST00000478074 UNC13AQ9UPW8 1703 aa33.26■■■□□ 2.92
KNDC1-203ENST00000478074 PABPN1Q86U42 306 aaKnown RBP eCLIP33.26■■■□□ 2.91
KNDC1-203ENST00000478074 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
KNDC1-203ENST00000478074 DCAF1Q9Y4B6 1507 aa33.17■■■□□ 2.9
KNDC1-203ENST00000478074 BICRAQ9NZM4 1560 aa33.05■■■□□ 2.88
KNDC1-203ENST00000478074 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.84
KNDC1-203ENST00000478074 SCRIBQ14160 1630 aa32.68■■■□□ 2.82
KNDC1-203ENST00000478074 CC2D2AQ9P2K1 1620 aa32.27■■■□□ 2.76
KNDC1-203ENST00000478074 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.75
KNDC1-203ENST00000478074 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
KNDC1-203ENST00000478074 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
KNDC1-203ENST00000478074 ATAD2BQ9ULI0 1458 aa31.22■■■□□ 2.59
KNDC1-203ENST00000478074 SMARCA4P51532 1647 aa31.21■■■□□ 2.59
KNDC1-203ENST00000478074 SMARCA2P51531 1590 aa31.19■■■□□ 2.58
KNDC1-203ENST00000478074 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
KNDC1-203ENST00000478074 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
KNDC1-203ENST00000478074 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.54
KNDC1-203ENST00000478074 PEG3Q9GZU2 1588 aa30.94■■■□□ 2.54
KNDC1-203ENST00000478074 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
KNDC1-203ENST00000478074 MROH2BQ7Z745 1585 aa30.84■■■□□ 2.53
KNDC1-203ENST00000478074 CUX2O14529 1486 aa30.79■■■□□ 2.52
KNDC1-203ENST00000478074 NESP48681 1621 aa30.69■■■□□ 2.5
KNDC1-203ENST00000478074 LAMC3Q9Y6N6 1575 aa30.6■■■□□ 2.49
KNDC1-203ENST00000478074 DNAJC5Q9H3Z4 198 aa30.58■■■□□ 2.49
KNDC1-203ENST00000478074 WIZO95785 1651 aa30.47■■■□□ 2.47
KNDC1-203ENST00000478074 PDS5BQ9NTI5 1447 aa30.44■■■□□ 2.46
KNDC1-203ENST00000478074 CADPSQ9ULU8 1353 aa30.38■■■□□ 2.45
KNDC1-203ENST00000478074 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
KNDC1-203ENST00000478074 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
KNDC1-203ENST00000478074 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
KNDC1-203ENST00000478074 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
KNDC1-203ENST00000478074 MRC2Q9UBG0 1479 aa30.13■■■□□ 2.41
KNDC1-203ENST00000478074 CFTRP13569 1480 aa30.06■■■□□ 2.4
KNDC1-203ENST00000478074 CEP164Q9UPV0 1460 aa30.05■■■□□ 2.4
KNDC1-203ENST00000478074 WDR62O43379 1518 aa30.03■■■□□ 2.4
KNDC1-203ENST00000478074 FANCD2Q9BXW9 1451 aa30.01■■■□□ 2.4
KNDC1-203ENST00000478074 CCDC88BA6NC98 1476 aa29.79■■■□□ 2.36
KNDC1-203ENST00000478074 PRDM2Q13029 1718 aa29.75■■■□□ 2.35
KNDC1-203ENST00000478074 URB2Q14146 1524 aaKnown RBP29.72■■■□□ 2.35
KNDC1-203ENST00000478074 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
KNDC1-203ENST00000478074 TOPBP1Q92547 1522 aa29.45■■■□□ 2.31
KNDC1-203ENST00000478074 IFT140Q96RY7 1462 aa29.45■■■□□ 2.31
KNDC1-203ENST00000478074 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
KNDC1-203ENST00000478074 DNMBPQ6XZF7 1577 aa29.37■■■□□ 2.29
KNDC1-203ENST00000478074 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
KNDC1-203ENST00000478074 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
KNDC1-203ENST00000478074 EIF4G3O43432 1585 aaKnown RBP29.18■■■□□ 2.26
KNDC1-203ENST00000478074 TARBP1Q13395 1621 aaKnown RBP29.16■■■□□ 2.26
KNDC1-203ENST00000478074 POLA1P09884 1462 aaPredicted RBP29.16■■■□□ 2.26
KNDC1-203ENST00000478074 AQRO60306 1485 aaKnown RBP eCLIP29.09■■■□□ 2.25
KNDC1-203ENST00000478074 SUPT5HO00267 1087 aaKnown RBP29.06■■■□□ 2.24
KNDC1-203ENST00000478074 SOGA1O94964 1423 aa29.05■■■□□ 2.24
KNDC1-203ENST00000478074 RAD54L2Q9Y4B4 1467 aa29.02■■■□□ 2.24
KNDC1-203ENST00000478074 FGD5Q6ZNL6 1462 aa28.99■■■□□ 2.23
KNDC1-203ENST00000478074 CUX1P39880 1505 aa28.98■■■□□ 2.23
KNDC1-203ENST00000478074 WDR97A6NE52 1622 aa28.96■■■□□ 2.23
KNDC1-203ENST00000478074 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.22
KNDC1-203ENST00000478074 RIMBP3CA6NJZ7 1639 aa28.94■■■□□ 2.22
KNDC1-203ENST00000478074 RIMBP3BA6NNM3 1639 aa28.94■■■□□ 2.22
KNDC1-203ENST00000478074 RIMBP3Q9UFD9 1639 aa28.94■■■□□ 2.22
KNDC1-203ENST00000478074 CHD1O14646 1710 aa28.92■■■□□ 2.22
KNDC1-203ENST00000478074 FBLN2P98095 1184 aa28.9■■■□□ 2.22
KNDC1-203ENST00000478074 ARHGEF11O15085 1522 aa28.89■■■□□ 2.21
KNDC1-203ENST00000478074 SNAPC4Q5SXM2 1469 aa28.81■■■□□ 2.2
KNDC1-203ENST00000478074 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
KNDC1-203ENST00000478074 MAGI1Q96QZ7 1491 aaPredicted RBP28.79■■■□□ 2.2
KNDC1-203ENST00000478074 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
KNDC1-203ENST00000478074 ABCA10Q8WWZ4 1543 aa28.7■■■□□ 2.19
KNDC1-203ENST00000478074 GAPVD1Q14C86 1478 aa28.7■■■□□ 2.18
KNDC1-203ENST00000478074 SYNJ2O15056 1496 aa28.68■■■□□ 2.18
KNDC1-203ENST00000478074 CYB5RLQ6IPT4 315 aa28.68■■■□□ 2.18
KNDC1-203ENST00000478074 SYNJ1O43426 1573 aa28.67■■■□□ 2.18
KNDC1-203ENST00000478074 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.18
KNDC1-203ENST00000478074 PBRM1Q86U86 1689 aa28.64■■■□□ 2.18
KNDC1-203ENST00000478074 CLASP1Q7Z460 1538 aa28.62■■■□□ 2.17
KNDC1-203ENST00000478074 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
KNDC1-203ENST00000478074 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
KNDC1-203ENST00000478074 TOP2BQ02880 1626 aa28.59■■■□□ 2.17
KNDC1-203ENST00000478074 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
KNDC1-203ENST00000478074 GRIN2AQ12879 1464 aa28.4■■■□□ 2.14
KNDC1-203ENST00000478074 ADAMTS12P58397 1594 aa28.39■■■□□ 2.14
KNDC1-203ENST00000478074 FHAD1B1AJZ9 1412 aa28.36■■■□□ 2.13
KNDC1-203ENST00000478074 ERICH3Q5RHP9 1530 aa28.36■■■□□ 2.13
KNDC1-203ENST00000478074 TRHP20396 242 aaPredicted RBP28.33■■■□□ 2.13
KNDC1-203ENST00000478074 NUP160Q12769 1436 aa28.31■■■□□ 2.12
KNDC1-203ENST00000478074 CEP170Q5SW79 1584 aa28.26■■■□□ 2.11
KNDC1-203ENST00000478074 SHROOM2Q13796 1616 aa28.15■■■□□ 2.1
KNDC1-203ENST00000478074 ERCC6L2Q5T890 1561 aa28.12■■■□□ 2.09
KNDC1-203ENST00000478074 KIF27Q86VH2 1401 aa28.08■■■□□ 2.09
KNDC1-203ENST00000478074 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
KNDC1-203ENST00000478074 PRG4Q92954 1404 aaPredicted RBP28.02■■■□□ 2.08
KNDC1-203ENST00000478074 IGF1RP08069 1367 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms