RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
LCLAT1-209ENST00000478015 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
LCLAT1-209ENST00000478015 ABCC9O60706 1549 aa22.44■■□□□ 1.18
LCLAT1-209ENST00000478015 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
LCLAT1-209ENST00000478015 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
LCLAT1-209ENST00000478015 NACADO15069 1562 aa21.28■■□□□ 1
LCLAT1-209ENST00000478015 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
LCLAT1-209ENST00000478015 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
LCLAT1-209ENST00000478015 UNC13AQ9UPW8 1703 aa21.03■□□□□ 0.96
LCLAT1-209ENST00000478015 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
LCLAT1-209ENST00000478015 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
LCLAT1-209ENST00000478015 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
LCLAT1-209ENST00000478015 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
LCLAT1-209ENST00000478015 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
LCLAT1-209ENST00000478015 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
LCLAT1-209ENST00000478015 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
LCLAT1-209ENST00000478015 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
LCLAT1-209ENST00000478015 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.81
LCLAT1-209ENST00000478015 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
LCLAT1-209ENST00000478015 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
LCLAT1-209ENST00000478015 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
LCLAT1-209ENST00000478015 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
LCLAT1-209ENST00000478015 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
LCLAT1-209ENST00000478015 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
LCLAT1-209ENST00000478015 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
LCLAT1-209ENST00000478015 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
LCLAT1-209ENST00000478015 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
LCLAT1-209ENST00000478015 WIZO95785 1651 aa19.42■□□□□ 0.7
LCLAT1-209ENST00000478015 NESP48681 1621 aa19.42■□□□□ 0.7
LCLAT1-209ENST00000478015 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
LCLAT1-209ENST00000478015 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
LCLAT1-209ENST00000478015 LAMC3Q9Y6N6 1575 aa19.16■□□□□ 0.66
LCLAT1-209ENST00000478015 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
LCLAT1-209ENST00000478015 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
LCLAT1-209ENST00000478015 CUX2O14529 1486 aa19.1■□□□□ 0.65
LCLAT1-209ENST00000478015 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
LCLAT1-209ENST00000478015 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.64
LCLAT1-209ENST00000478015 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
LCLAT1-209ENST00000478015 CFTRP13569 1480 aa18.97■□□□□ 0.63
LCLAT1-209ENST00000478015 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
LCLAT1-209ENST00000478015 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
LCLAT1-209ENST00000478015 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
LCLAT1-209ENST00000478015 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
LCLAT1-209ENST00000478015 WDR62O43379 1518 aa18.85■□□□□ 0.61
LCLAT1-209ENST00000478015 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
LCLAT1-209ENST00000478015 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
LCLAT1-209ENST00000478015 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
LCLAT1-209ENST00000478015 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
LCLAT1-209ENST00000478015 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
LCLAT1-209ENST00000478015 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
LCLAT1-209ENST00000478015 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
LCLAT1-209ENST00000478015 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
LCLAT1-209ENST00000478015 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
LCLAT1-209ENST00000478015 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
LCLAT1-209ENST00000478015 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
LCLAT1-209ENST00000478015 CUX1P39880 1505 aa18.41■□□□□ 0.54
LCLAT1-209ENST00000478015 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
LCLAT1-209ENST00000478015 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.53
LCLAT1-209ENST00000478015 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
LCLAT1-209ENST00000478015 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
LCLAT1-209ENST00000478015 SOGA1O94964 1423 aa18.32■□□□□ 0.52
LCLAT1-209ENST00000478015 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
LCLAT1-209ENST00000478015 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
LCLAT1-209ENST00000478015 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
LCLAT1-209ENST00000478015 CHD1O14646 1710 aa18.2■□□□□ 0.5
LCLAT1-209ENST00000478015 SYNJ1O43426 1573 aa18.2■□□□□ 0.5
LCLAT1-209ENST00000478015 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
LCLAT1-209ENST00000478015 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
LCLAT1-209ENST00000478015 SNAPC4Q5SXM2 1469 aa18.15■□□□□ 0.5
LCLAT1-209ENST00000478015 FBLN2P98095 1184 aa18.15■□□□□ 0.5
LCLAT1-209ENST00000478015 TOP2BQ02880 1626 aa18.14■□□□□ 0.49
LCLAT1-209ENST00000478015 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
LCLAT1-209ENST00000478015 BIVM-ERCC5R4GMW8 1640 aa18.13■□□□□ 0.49
LCLAT1-209ENST00000478015 RIMBP3CA6NJZ7 1639 aa18.1■□□□□ 0.49
LCLAT1-209ENST00000478015 RIMBP3BA6NNM3 1639 aa18.1■□□□□ 0.49
LCLAT1-209ENST00000478015 RIMBP3Q9UFD9 1639 aa18.1■□□□□ 0.49
LCLAT1-209ENST00000478015 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
LCLAT1-209ENST00000478015 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
LCLAT1-209ENST00000478015 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
LCLAT1-209ENST00000478015 PBRM1Q86U86 1689 aa18.08■□□□□ 0.48
LCLAT1-209ENST00000478015 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
LCLAT1-209ENST00000478015 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
LCLAT1-209ENST00000478015 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
LCLAT1-209ENST00000478015 SYNJ2O15056 1496 aa18.02■□□□□ 0.47
LCLAT1-209ENST00000478015 CLASP1Q7Z460 1538 aa17.99■□□□□ 0.47
LCLAT1-209ENST00000478015 CYB5RLQ6IPT4 315 aa17.94■□□□□ 0.46
LCLAT1-209ENST00000478015 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
LCLAT1-209ENST00000478015 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
LCLAT1-209ENST00000478015 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
LCLAT1-209ENST00000478015 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
LCLAT1-209ENST00000478015 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
LCLAT1-209ENST00000478015 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
LCLAT1-209ENST00000478015 ERCC6L2Q5T890 1561 aa17.84■□□□□ 0.45
LCLAT1-209ENST00000478015 NUP160Q12769 1436 aa17.83■□□□□ 0.45
LCLAT1-209ENST00000478015 IGF1RP08069 1367 aa17.8■□□□□ 0.44
LCLAT1-209ENST00000478015 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
LCLAT1-209ENST00000478015 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
LCLAT1-209ENST00000478015 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
LCLAT1-209ENST00000478015 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
LCLAT1-209ENST00000478015 PRG4Q92954 1404 aaPredicted RBP17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms