RNA–Protein interactions for RNA: ENST00000477941.2

PDE4DIP-212, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 3

Gene PDE4DIP, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-212ENST00000477941 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
PDE4DIP-212ENST00000477941 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
PDE4DIP-212ENST00000477941 ABCC9O60706 1549 aa29.3■■■□□ 2.28
PDE4DIP-212ENST00000477941 RB1CC1Q8TDY2 1594 aa27.88■■■□□ 2.05
PDE4DIP-212ENST00000477941 NACADO15069 1562 aa27.7■■■□□ 2.03
PDE4DIP-212ENST00000477941 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
PDE4DIP-212ENST00000477941 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
PDE4DIP-212ENST00000477941 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
PDE4DIP-212ENST00000477941 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
PDE4DIP-212ENST00000477941 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
PDE4DIP-212ENST00000477941 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
PDE4DIP-212ENST00000477941 BICRAQ9NZM4 1560 aa27.07■■□□□ 1.92
PDE4DIP-212ENST00000477941 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
PDE4DIP-212ENST00000477941 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
PDE4DIP-212ENST00000477941 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
PDE4DIP-212ENST00000477941 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
PDE4DIP-212ENST00000477941 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
PDE4DIP-212ENST00000477941 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
PDE4DIP-212ENST00000477941 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
PDE4DIP-212ENST00000477941 ATAD2BQ9ULI0 1458 aa25.52■■□□□ 1.68
PDE4DIP-212ENST00000477941 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
PDE4DIP-212ENST00000477941 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
PDE4DIP-212ENST00000477941 HMGXB3Q12766 1538 aa25.39■■□□□ 1.66
PDE4DIP-212ENST00000477941 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
PDE4DIP-212ENST00000477941 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
PDE4DIP-212ENST00000477941 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
PDE4DIP-212ENST00000477941 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
PDE4DIP-212ENST00000477941 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
PDE4DIP-212ENST00000477941 CUX2O14529 1486 aa25.19■■□□□ 1.62
PDE4DIP-212ENST00000477941 NESP48681 1621 aa25.19■■□□□ 1.62
PDE4DIP-212ENST00000477941 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
PDE4DIP-212ENST00000477941 LAMC3Q9Y6N6 1575 aa24.98■■□□□ 1.59
PDE4DIP-212ENST00000477941 WIZO95785 1651 aa24.91■■□□□ 1.58
PDE4DIP-212ENST00000477941 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
PDE4DIP-212ENST00000477941 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
PDE4DIP-212ENST00000477941 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
PDE4DIP-212ENST00000477941 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
PDE4DIP-212ENST00000477941 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
PDE4DIP-212ENST00000477941 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
PDE4DIP-212ENST00000477941 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
PDE4DIP-212ENST00000477941 WDR62O43379 1518 aa24.58■■□□□ 1.53
PDE4DIP-212ENST00000477941 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
PDE4DIP-212ENST00000477941 CFTRP13569 1480 aa24.54■■□□□ 1.52
PDE4DIP-212ENST00000477941 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
PDE4DIP-212ENST00000477941 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
PDE4DIP-212ENST00000477941 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
PDE4DIP-212ENST00000477941 PRDM2Q13029 1718 aa24.28■■□□□ 1.48
PDE4DIP-212ENST00000477941 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
PDE4DIP-212ENST00000477941 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
PDE4DIP-212ENST00000477941 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
PDE4DIP-212ENST00000477941 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
PDE4DIP-212ENST00000477941 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
PDE4DIP-212ENST00000477941 ABCC8Q09428 1581 aa24■■□□□ 1.43
PDE4DIP-212ENST00000477941 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
PDE4DIP-212ENST00000477941 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
PDE4DIP-212ENST00000477941 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
PDE4DIP-212ENST00000477941 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
PDE4DIP-212ENST00000477941 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.4
PDE4DIP-212ENST00000477941 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
PDE4DIP-212ENST00000477941 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
PDE4DIP-212ENST00000477941 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
PDE4DIP-212ENST00000477941 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
PDE4DIP-212ENST00000477941 SOGA1O94964 1423 aa23.73■■□□□ 1.39
PDE4DIP-212ENST00000477941 CHD1O14646 1710 aa23.7■■□□□ 1.39
PDE4DIP-212ENST00000477941 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
PDE4DIP-212ENST00000477941 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
PDE4DIP-212ENST00000477941 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
PDE4DIP-212ENST00000477941 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
PDE4DIP-212ENST00000477941 CUX1P39880 1505 aa23.69■■□□□ 1.38
PDE4DIP-212ENST00000477941 FBLN2P98095 1184 aa23.67■■□□□ 1.38
PDE4DIP-212ENST00000477941 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
PDE4DIP-212ENST00000477941 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
PDE4DIP-212ENST00000477941 CYB5RLQ6IPT4 315 aa23.53■■□□□ 1.36
PDE4DIP-212ENST00000477941 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
PDE4DIP-212ENST00000477941 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
PDE4DIP-212ENST00000477941 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
PDE4DIP-212ENST00000477941 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
PDE4DIP-212ENST00000477941 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
PDE4DIP-212ENST00000477941 SYNJ2O15056 1496 aa23.43■■□□□ 1.34
PDE4DIP-212ENST00000477941 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
PDE4DIP-212ENST00000477941 PBRM1Q86U86 1689 aa23.42■■□□□ 1.34
PDE4DIP-212ENST00000477941 SYNJ1O43426 1573 aa23.42■■□□□ 1.34
PDE4DIP-212ENST00000477941 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
PDE4DIP-212ENST00000477941 ABCA5Q8WWZ7 1642 aa23.38■■□□□ 1.33
PDE4DIP-212ENST00000477941 WRNQ14191 1432 aaPredicted RBP eCLIP23.35■■□□□ 1.33
PDE4DIP-212ENST00000477941 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
PDE4DIP-212ENST00000477941 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
PDE4DIP-212ENST00000477941 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
PDE4DIP-212ENST00000477941 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
PDE4DIP-212ENST00000477941 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
PDE4DIP-212ENST00000477941 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
PDE4DIP-212ENST00000477941 CEP170Q5SW79 1584 aa23.14■■□□□ 1.29
PDE4DIP-212ENST00000477941 NUP160Q12769 1436 aa23.13■■□□□ 1.29
PDE4DIP-212ENST00000477941 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
PDE4DIP-212ENST00000477941 ERCC6L2Q5T890 1561 aa23.09■■□□□ 1.29
PDE4DIP-212ENST00000477941 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
PDE4DIP-212ENST00000477941 PRG4Q92954 1404 aaPredicted RBP22.91■■□□□ 1.26
PDE4DIP-212ENST00000477941 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
PDE4DIP-212ENST00000477941 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
PDE4DIP-212ENST00000477941 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms