RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
HDAC7-222ENST00000477937 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
HDAC7-222ENST00000477937 ABCC9O60706 1549 aa29.94■■■□□ 2.38
HDAC7-222ENST00000477937 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
HDAC7-222ENST00000477937 NACADO15069 1562 aa28.58■■■□□ 2.17
HDAC7-222ENST00000477937 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
HDAC7-222ENST00000477937 MYO15BQ96JP2 1530 aa28.29■■■□□ 2.12
HDAC7-222ENST00000477937 ZCCHC6Q5VYS8 1495 aaKnown RBP28.19■■■□□ 2.1
HDAC7-222ENST00000477937 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
HDAC7-222ENST00000477937 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
HDAC7-222ENST00000477937 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
HDAC7-222ENST00000477937 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
HDAC7-222ENST00000477937 DNAJC5BQ9UF47 199 aa27.73■■■□□ 2.03
HDAC7-222ENST00000477937 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
HDAC7-222ENST00000477937 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
HDAC7-222ENST00000477937 EIF4G1Q04637 1599 aaKnown RBP27.1■■□□□ 1.93
HDAC7-222ENST00000477937 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
HDAC7-222ENST00000477937 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
HDAC7-222ENST00000477937 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
HDAC7-222ENST00000477937 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
HDAC7-222ENST00000477937 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
HDAC7-222ENST00000477937 ATAD2BQ9ULI0 1458 aa26.32■■□□□ 1.8
HDAC7-222ENST00000477937 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
HDAC7-222ENST00000477937 HMGXB3Q12766 1538 aa26.2■■□□□ 1.79
HDAC7-222ENST00000477937 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
HDAC7-222ENST00000477937 PEG3Q9GZU2 1588 aa26.15■■□□□ 1.78
HDAC7-222ENST00000477937 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
HDAC7-222ENST00000477937 WIZO95785 1651 aa25.89■■□□□ 1.73
HDAC7-222ENST00000477937 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
HDAC7-222ENST00000477937 NESP48681 1621 aa25.82■■□□□ 1.72
HDAC7-222ENST00000477937 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
HDAC7-222ENST00000477937 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
HDAC7-222ENST00000477937 CUX2O14529 1486 aa25.66■■□□□ 1.7
HDAC7-222ENST00000477937 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
HDAC7-222ENST00000477937 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
HDAC7-222ENST00000477937 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
HDAC7-222ENST00000477937 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
HDAC7-222ENST00000477937 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
HDAC7-222ENST00000477937 CFTRP13569 1480 aa25.36■■□□□ 1.65
HDAC7-222ENST00000477937 MRC2Q9UBG0 1479 aa25.31■■□□□ 1.64
HDAC7-222ENST00000477937 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
HDAC7-222ENST00000477937 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
HDAC7-222ENST00000477937 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
HDAC7-222ENST00000477937 DNAJC5Q9H3Z4 198 aa25.24■■□□□ 1.63
HDAC7-222ENST00000477937 PRDM2Q13029 1718 aa25.23■■□□□ 1.63
HDAC7-222ENST00000477937 WDR62O43379 1518 aa25.22■■□□□ 1.63
HDAC7-222ENST00000477937 URB2Q14146 1524 aaKnown RBP25.04■■□□□ 1.6
HDAC7-222ENST00000477937 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
HDAC7-222ENST00000477937 ABCC8Q09428 1581 aa24.86■■□□□ 1.57
HDAC7-222ENST00000477937 TOPBP1Q92547 1522 aa24.85■■□□□ 1.57
HDAC7-222ENST00000477937 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
HDAC7-222ENST00000477937 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
HDAC7-222ENST00000477937 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
HDAC7-222ENST00000477937 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
HDAC7-222ENST00000477937 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
HDAC7-222ENST00000477937 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
HDAC7-222ENST00000477937 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
HDAC7-222ENST00000477937 CUX1P39880 1505 aa24.55■■□□□ 1.52
HDAC7-222ENST00000477937 SOGA1O94964 1423 aa24.53■■□□□ 1.52
HDAC7-222ENST00000477937 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
HDAC7-222ENST00000477937 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
HDAC7-222ENST00000477937 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.519e-10■■■■■ 39.9
HDAC7-222ENST00000477937 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
HDAC7-222ENST00000477937 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
HDAC7-222ENST00000477937 CHD1O14646 1710 aa24.37■■□□□ 1.49
HDAC7-222ENST00000477937 FBLN2P98095 1184 aa24.31■■□□□ 1.48
HDAC7-222ENST00000477937 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
HDAC7-222ENST00000477937 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
HDAC7-222ENST00000477937 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
HDAC7-222ENST00000477937 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
HDAC7-222ENST00000477937 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
HDAC7-222ENST00000477937 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
HDAC7-222ENST00000477937 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
HDAC7-222ENST00000477937 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
HDAC7-222ENST00000477937 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
HDAC7-222ENST00000477937 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
HDAC7-222ENST00000477937 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
HDAC7-222ENST00000477937 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
HDAC7-222ENST00000477937 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
HDAC7-222ENST00000477937 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
HDAC7-222ENST00000477937 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
HDAC7-222ENST00000477937 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
HDAC7-222ENST00000477937 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
HDAC7-222ENST00000477937 SYNJ2O15056 1496 aa24.14■■□□□ 1.46
HDAC7-222ENST00000477937 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
HDAC7-222ENST00000477937 ERICH3Q5RHP9 1530 aa23.99■■□□□ 1.43
HDAC7-222ENST00000477937 CYB5RLQ6IPT4 315 aa23.98■■□□□ 1.43
HDAC7-222ENST00000477937 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
HDAC7-222ENST00000477937 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
HDAC7-222ENST00000477937 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
HDAC7-222ENST00000477937 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
HDAC7-222ENST00000477937 NUP160Q12769 1436 aa23.84■■□□□ 1.41
HDAC7-222ENST00000477937 CEP170Q5SW79 1584 aa23.84■■□□□ 1.41
HDAC7-222ENST00000477937 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
HDAC7-222ENST00000477937 IGF1RP08069 1367 aa23.75■■□□□ 1.39
HDAC7-222ENST00000477937 CUL7Q14999 1698 aa23.73■■□□□ 1.39
HDAC7-222ENST00000477937 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
HDAC7-222ENST00000477937 ERCC6L2Q5T890 1561 aa23.68■■□□□ 1.38
HDAC7-222ENST00000477937 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
HDAC7-222ENST00000477937 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms