RNA–Protein interactions for RNA: ENST00000477916.5

MDS2-202, Transcript of myelodysplastic syndrome 2 translocation associated, humanhuman

TSL 1 (best)

Gene MDS2, Length 1,781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDS2-202ENST00000477916 NISCHQ9Y2I1 1504 aa24.23■■□□□ 1.47
MDS2-202ENST00000477916 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.07
MDS2-202ENST00000477916 ABCC9O60706 1549 aa21.51■■□□□ 1.03
MDS2-202ENST00000477916 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.88
MDS2-202ENST00000477916 NACADO15069 1562 aa20.46■□□□□ 0.87
MDS2-202ENST00000477916 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.86
MDS2-202ENST00000477916 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
MDS2-202ENST00000477916 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
MDS2-202ENST00000477916 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
MDS2-202ENST00000477916 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
MDS2-202ENST00000477916 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
MDS2-202ENST00000477916 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
MDS2-202ENST00000477916 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
MDS2-202ENST00000477916 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
MDS2-202ENST00000477916 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
MDS2-202ENST00000477916 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
MDS2-202ENST00000477916 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
MDS2-202ENST00000477916 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
MDS2-202ENST00000477916 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
MDS2-202ENST00000477916 NCAPD3P42695 1498 aa18.86■□□□□ 0.61
MDS2-202ENST00000477916 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.61
MDS2-202ENST00000477916 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
MDS2-202ENST00000477916 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.6
MDS2-202ENST00000477916 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
MDS2-202ENST00000477916 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
MDS2-202ENST00000477916 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
MDS2-202ENST00000477916 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
MDS2-202ENST00000477916 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
MDS2-202ENST00000477916 NESP48681 1621 aa18.5■□□□□ 0.55
MDS2-202ENST00000477916 CUX2O14529 1486 aa18.48■□□□□ 0.55
MDS2-202ENST00000477916 WIZO95785 1651 aa18.46■□□□□ 0.55
MDS2-202ENST00000477916 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
MDS2-202ENST00000477916 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
MDS2-202ENST00000477916 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
MDS2-202ENST00000477916 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
MDS2-202ENST00000477916 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
MDS2-202ENST00000477916 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
MDS2-202ENST00000477916 CADPSQ9ULU8 1353 aa18.3■□□□□ 0.52
MDS2-202ENST00000477916 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
MDS2-202ENST00000477916 DNAJC5Q9H3Z4 198 aa18.21■□□□□ 0.51
MDS2-202ENST00000477916 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
MDS2-202ENST00000477916 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
MDS2-202ENST00000477916 CFTRP13569 1480 aa18.13■□□□□ 0.49
MDS2-202ENST00000477916 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
MDS2-202ENST00000477916 WDR62O43379 1518 aa18.1■□□□□ 0.49
MDS2-202ENST00000477916 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
MDS2-202ENST00000477916 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
MDS2-202ENST00000477916 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
MDS2-202ENST00000477916 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
MDS2-202ENST00000477916 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
MDS2-202ENST00000477916 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
MDS2-202ENST00000477916 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
MDS2-202ENST00000477916 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
MDS2-202ENST00000477916 ZNF608Q9ULD9 1512 aaPredicted RBP17.68■□□□□ 0.42
MDS2-202ENST00000477916 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
MDS2-202ENST00000477916 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
MDS2-202ENST00000477916 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
MDS2-202ENST00000477916 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
MDS2-202ENST00000477916 AQRO60306 1485 aaKnown RBP eCLIP17.55■□□□□ 0.4
MDS2-202ENST00000477916 CUX1P39880 1505 aa17.54■□□□□ 0.4
MDS2-202ENST00000477916 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
MDS2-202ENST00000477916 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
MDS2-202ENST00000477916 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
MDS2-202ENST00000477916 SOGA1O94964 1423 aa17.53■□□□□ 0.4
MDS2-202ENST00000477916 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
MDS2-202ENST00000477916 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
MDS2-202ENST00000477916 CHD1O14646 1710 aa17.46■□□□□ 0.39
MDS2-202ENST00000477916 FBLN2P98095 1184 aa17.43■□□□□ 0.38
MDS2-202ENST00000477916 RIMBP3CA6NJZ7 1639 aa17.41■□□□□ 0.38
MDS2-202ENST00000477916 RIMBP3BA6NNM3 1639 aa17.41■□□□□ 0.38
MDS2-202ENST00000477916 RIMBP3Q9UFD9 1639 aa17.41■□□□□ 0.38
MDS2-202ENST00000477916 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
MDS2-202ENST00000477916 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
MDS2-202ENST00000477916 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
MDS2-202ENST00000477916 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
MDS2-202ENST00000477916 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
MDS2-202ENST00000477916 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
MDS2-202ENST00000477916 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
MDS2-202ENST00000477916 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.37
MDS2-202ENST00000477916 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
MDS2-202ENST00000477916 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
MDS2-202ENST00000477916 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
MDS2-202ENST00000477916 ABCA5Q8WWZ7 1642 aa17.31■□□□□ 0.36
MDS2-202ENST00000477916 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
MDS2-202ENST00000477916 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
MDS2-202ENST00000477916 LOC105371045A0A1W2PR82 267 aa17.28■□□□□ 0.36
MDS2-202ENST00000477916 HRCP23327 699 aa17.27■□□□□ 0.35
MDS2-202ENST00000477916 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
MDS2-202ENST00000477916 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
MDS2-202ENST00000477916 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
MDS2-202ENST00000477916 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
MDS2-202ENST00000477916 ADAMTS12P58397 1594 aa17.18■□□□□ 0.34
MDS2-202ENST00000477916 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
MDS2-202ENST00000477916 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
MDS2-202ENST00000477916 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
MDS2-202ENST00000477916 CEP170Q5SW79 1584 aa17.07■□□□□ 0.32
MDS2-202ENST00000477916 NUP160Q12769 1436 aa17.07■□□□□ 0.32
MDS2-202ENST00000477916 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
MDS2-202ENST00000477916 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
MDS2-202ENST00000477916 KIF27Q86VH2 1401 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms