RNA–Protein interactions for RNA: ENST00000477905.1

LRRC42-205, Transcript of leucine rich repeat containing 42, humanhuman

TSL 2

Gene LRRC42, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-205ENST00000477905 NISCHQ9Y2I1 1504 aa33.44■■■□□ 2.94
LRRC42-205ENST00000477905 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
LRRC42-205ENST00000477905 ABCC9O60706 1549 aa29.5■■■□□ 2.31
LRRC42-205ENST00000477905 RB1CC1Q8TDY2 1594 aa28.33■■■□□ 2.12
LRRC42-205ENST00000477905 NACADO15069 1562 aa28.27■■■□□ 2.12
LRRC42-205ENST00000477905 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
LRRC42-205ENST00000477905 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
LRRC42-205ENST00000477905 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
LRRC42-205ENST00000477905 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
LRRC42-205ENST00000477905 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
LRRC42-205ENST00000477905 DNAJC5BQ9UF47 199 aa27.55■■■□□ 2
LRRC42-205ENST00000477905 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
LRRC42-205ENST00000477905 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
LRRC42-205ENST00000477905 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
LRRC42-205ENST00000477905 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
LRRC42-205ENST00000477905 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
LRRC42-205ENST00000477905 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
LRRC42-205ENST00000477905 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
LRRC42-205ENST00000477905 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
LRRC42-205ENST00000477905 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
LRRC42-205ENST00000477905 SMARCA4P51532 1647 aa25.99■■□□□ 1.75
LRRC42-205ENST00000477905 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
LRRC42-205ENST00000477905 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
LRRC42-205ENST00000477905 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
LRRC42-205ENST00000477905 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
LRRC42-205ENST00000477905 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.71
LRRC42-205ENST00000477905 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
LRRC42-205ENST00000477905 CUX2O14529 1486 aa25.52■■□□□ 1.68
LRRC42-205ENST00000477905 LAMC3Q9Y6N6 1575 aa25.44■■□□□ 1.66
LRRC42-205ENST00000477905 NESP48681 1621 aa25.43■■□□□ 1.66
LRRC42-205ENST00000477905 ERCC6Q03468 1493 aa25.42■■□□□ 1.66
LRRC42-205ENST00000477905 WIZO95785 1651 aa25.33■■□□□ 1.65
LRRC42-205ENST00000477905 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
LRRC42-205ENST00000477905 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
LRRC42-205ENST00000477905 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
LRRC42-205ENST00000477905 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
LRRC42-205ENST00000477905 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
LRRC42-205ENST00000477905 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
LRRC42-205ENST00000477905 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
LRRC42-205ENST00000477905 CFTRP13569 1480 aa25.08■■□□□ 1.6
LRRC42-205ENST00000477905 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
LRRC42-205ENST00000477905 WDR62O43379 1518 aa24.98■■□□□ 1.59
LRRC42-205ENST00000477905 FANCD2Q9BXW9 1451 aa24.91■■□□□ 1.58
LRRC42-205ENST00000477905 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
LRRC42-205ENST00000477905 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
LRRC42-205ENST00000477905 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
LRRC42-205ENST00000477905 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
LRRC42-205ENST00000477905 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
LRRC42-205ENST00000477905 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
LRRC42-205ENST00000477905 IFT140Q96RY7 1462 aa24.45■■□□□ 1.51
LRRC42-205ENST00000477905 DNMBPQ6XZF7 1577 aa24.43■■□□□ 1.5
LRRC42-205ENST00000477905 ZNF608Q9ULD9 1512 aaPredicted RBP24.32■■□□□ 1.48
LRRC42-205ENST00000477905 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
LRRC42-205ENST00000477905 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
LRRC42-205ENST00000477905 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
LRRC42-205ENST00000477905 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.47
LRRC42-205ENST00000477905 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
LRRC42-205ENST00000477905 CUX1P39880 1505 aa24.14■■□□□ 1.45
LRRC42-205ENST00000477905 SOGA1O94964 1423 aa24.11■■□□□ 1.45
LRRC42-205ENST00000477905 AQRO60306 1485 aaKnown RBP eCLIP24.11■■□□□ 1.45
LRRC42-205ENST00000477905 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
LRRC42-205ENST00000477905 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
LRRC42-205ENST00000477905 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
LRRC42-205ENST00000477905 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
LRRC42-205ENST00000477905 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
LRRC42-205ENST00000477905 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
LRRC42-205ENST00000477905 CHD1O14646 1710 aa23.93■■□□□ 1.42
LRRC42-205ENST00000477905 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
LRRC42-205ENST00000477905 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
LRRC42-205ENST00000477905 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
LRRC42-205ENST00000477905 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
LRRC42-205ENST00000477905 ARHGEF11O15085 1522 aa23.9■■□□□ 1.42
LRRC42-205ENST00000477905 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
LRRC42-205ENST00000477905 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
LRRC42-205ENST00000477905 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
LRRC42-205ENST00000477905 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
LRRC42-205ENST00000477905 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
LRRC42-205ENST00000477905 GAPVD1Q14C86 1478 aa23.84■■□□□ 1.41
LRRC42-205ENST00000477905 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
LRRC42-205ENST00000477905 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
LRRC42-205ENST00000477905 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
LRRC42-205ENST00000477905 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
LRRC42-205ENST00000477905 SYNJ1O43426 1573 aa23.75■■□□□ 1.39
LRRC42-205ENST00000477905 FBLN2P98095 1184 aa23.73■■□□□ 1.39
LRRC42-205ENST00000477905 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
LRRC42-205ENST00000477905 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
LRRC42-205ENST00000477905 ERICH3Q5RHP9 1530 aa23.64■■□□□ 1.38
LRRC42-205ENST00000477905 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
LRRC42-205ENST00000477905 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
LRRC42-205ENST00000477905 NUP160Q12769 1436 aa23.6■■□□□ 1.37
LRRC42-205ENST00000477905 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
LRRC42-205ENST00000477905 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
LRRC42-205ENST00000477905 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
LRRC42-205ENST00000477905 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
LRRC42-205ENST00000477905 IGF1RP08069 1367 aa23.37■■□□□ 1.33
LRRC42-205ENST00000477905 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
LRRC42-205ENST00000477905 ERCC6L2Q5T890 1561 aa23.33■■□□□ 1.33
LRRC42-205ENST00000477905 CUL7Q14999 1698 aa23.28■■□□□ 1.32
LRRC42-205ENST00000477905 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
LRRC42-205ENST00000477905 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms