RNA–Protein interactions for RNA: ENST00000477795.1

PARVB-207, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-207ENST00000477795 NISCHQ9Y2I1 1504 aa31.54■■■□□ 2.64
PARVB-207ENST00000477795 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
PARVB-207ENST00000477795 ABCC9O60706 1549 aa27.4■■□□□ 1.98
PARVB-207ENST00000477795 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
PARVB-207ENST00000477795 NACADO15069 1562 aa26.46■■□□□ 1.83
PARVB-207ENST00000477795 MYO15BQ96JP2 1530 aa26.31■■□□□ 1.8
PARVB-207ENST00000477795 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
PARVB-207ENST00000477795 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
PARVB-207ENST00000477795 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
PARVB-207ENST00000477795 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
PARVB-207ENST00000477795 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
PARVB-207ENST00000477795 BICRAQ9NZM4 1560 aa25.6■■□□□ 1.69
PARVB-207ENST00000477795 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
PARVB-207ENST00000477795 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
PARVB-207ENST00000477795 DNAJC5BQ9UF47 199 aa25.02■■□□□ 1.6
PARVB-207ENST00000477795 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
PARVB-207ENST00000477795 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
PARVB-207ENST00000477795 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
PARVB-207ENST00000477795 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
PARVB-207ENST00000477795 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
PARVB-207ENST00000477795 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
PARVB-207ENST00000477795 NCAPD3P42695 1498 aa24.33■■□□□ 1.49
PARVB-207ENST00000477795 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
PARVB-207ENST00000477795 PEG3Q9GZU2 1588 aa24.3■■□□□ 1.48
PARVB-207ENST00000477795 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
PARVB-207ENST00000477795 MROH2BQ7Z745 1585 aa24.26■■□□□ 1.47
PARVB-207ENST00000477795 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
PARVB-207ENST00000477795 WIZO95785 1651 aa24.05■■□□□ 1.44
PARVB-207ENST00000477795 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
PARVB-207ENST00000477795 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
PARVB-207ENST00000477795 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
PARVB-207ENST00000477795 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
PARVB-207ENST00000477795 NESP48681 1621 aa23.68■■□□□ 1.38
PARVB-207ENST00000477795 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
PARVB-207ENST00000477795 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
PARVB-207ENST00000477795 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
PARVB-207ENST00000477795 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
PARVB-207ENST00000477795 CUX2O14529 1486 aa23.49■■□□□ 1.35
PARVB-207ENST00000477795 CFTRP13569 1480 aa23.49■■□□□ 1.35
PARVB-207ENST00000477795 CCDC88BA6NC98 1476 aa23.47■■□□□ 1.35
PARVB-207ENST00000477795 THOC2Q8NI27 1593 aaKnown RBP23.44■■□□□ 1.34
PARVB-207ENST00000477795 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
PARVB-207ENST00000477795 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
PARVB-207ENST00000477795 MRC2Q9UBG0 1479 aa23.32■■□□□ 1.32
PARVB-207ENST00000477795 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
PARVB-207ENST00000477795 WDR62O43379 1518 aa23.27■■□□□ 1.32
PARVB-207ENST00000477795 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
PARVB-207ENST00000477795 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
PARVB-207ENST00000477795 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
PARVB-207ENST00000477795 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
PARVB-207ENST00000477795 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
PARVB-207ENST00000477795 CUX1P39880 1505 aa22.78■■□□□ 1.24
PARVB-207ENST00000477795 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
PARVB-207ENST00000477795 TARBP1Q13395 1621 aaKnown RBP22.76■■□□□ 1.23
PARVB-207ENST00000477795 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
PARVB-207ENST00000477795 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
PARVB-207ENST00000477795 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
PARVB-207ENST00000477795 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
PARVB-207ENST00000477795 ZNF608Q9ULD9 1512 aaPredicted RBP22.67■■□□□ 1.22
PARVB-207ENST00000477795 SOGA1O94964 1423 aa22.66■■□□□ 1.22
PARVB-207ENST00000477795 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
PARVB-207ENST00000477795 DNAJC5Q9H3Z4 198 aa22.65■■□□□ 1.22
PARVB-207ENST00000477795 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
PARVB-207ENST00000477795 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
PARVB-207ENST00000477795 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
PARVB-207ENST00000477795 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.2
PARVB-207ENST00000477795 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
PARVB-207ENST00000477795 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
PARVB-207ENST00000477795 ABCA5Q8WWZ7 1642 aa22.48■■□□□ 1.19
PARVB-207ENST00000477795 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
PARVB-207ENST00000477795 GRIN2BQ13224 1484 aa22.46■■□□□ 1.19
PARVB-207ENST00000477795 CHD1O14646 1710 aa22.45■■□□□ 1.19
PARVB-207ENST00000477795 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
PARVB-207ENST00000477795 MAGI1Q96QZ7 1491 aaPredicted RBP22.43■■□□□ 1.18
PARVB-207ENST00000477795 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
PARVB-207ENST00000477795 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
PARVB-207ENST00000477795 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
PARVB-207ENST00000477795 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
PARVB-207ENST00000477795 FBLN2P98095 1184 aa22.27■■□□□ 1.16
PARVB-207ENST00000477795 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
PARVB-207ENST00000477795 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
PARVB-207ENST00000477795 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
PARVB-207ENST00000477795 FHAD1B1AJZ9 1412 aa22.19■■□□□ 1.14
PARVB-207ENST00000477795 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
PARVB-207ENST00000477795 CUL7Q14999 1698 aa22.15■■□□□ 1.14
PARVB-207ENST00000477795 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
PARVB-207ENST00000477795 RIMBP3CA6NJZ7 1639 aa22.13■■□□□ 1.13
PARVB-207ENST00000477795 RIMBP3BA6NNM3 1639 aa22.13■■□□□ 1.13
PARVB-207ENST00000477795 RIMBP3Q9UFD9 1639 aa22.13■■□□□ 1.13
PARVB-207ENST00000477795 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
PARVB-207ENST00000477795 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
PARVB-207ENST00000477795 NUP160Q12769 1436 aa22.05■■□□□ 1.12
PARVB-207ENST00000477795 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
PARVB-207ENST00000477795 IGF1RP08069 1367 aa22.02■■□□□ 1.12
PARVB-207ENST00000477795 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
PARVB-207ENST00000477795 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
PARVB-207ENST00000477795 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
PARVB-207ENST00000477795 ARAP1Q96P48 1450 aa21.89■■□□□ 1.09
PARVB-207ENST00000477795 KIAA0586Q9BVV6 1533 aa21.85■■□□□ 1.09
PARVB-207ENST00000477795 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms