RNA–Protein interactions for RNA: ENST00000477746.1

DENND4B-207, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-207ENST00000477746 NISCHQ9Y2I1 1504 aa40.47■■■■■ 4.07
DENND4B-207ENST00000477746 ABCC9O60706 1549 aa36.29■■■■□ 3.4
DENND4B-207ENST00000477746 CCDC180Q9P1Z9 1646 aa36.17■■■■□ 3.38
DENND4B-207ENST00000477746 RB1CC1Q8TDY2 1594 aa34.48■■■■□ 3.11
DENND4B-207ENST00000477746 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
DENND4B-207ENST00000477746 NACADO15069 1562 aa34.24■■■■□ 3.07
DENND4B-207ENST00000477746 DNAJC5BQ9UF47 199 aa33.95■■■■□ 3.03
DENND4B-207ENST00000477746 PABPN1Q86U42 306 aaKnown RBP eCLIP33.89■■■■□ 3.02
DENND4B-207ENST00000477746 MYO15BQ96JP2 1530 aa33.74■■■□□ 2.99
DENND4B-207ENST00000477746 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
DENND4B-207ENST00000477746 ZCCHC6Q5VYS8 1495 aaKnown RBP33.55■■■□□ 2.96
DENND4B-207ENST00000477746 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
DENND4B-207ENST00000477746 DCAF1Q9Y4B6 1507 aa33.35■■■□□ 2.93
DENND4B-207ENST00000477746 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
DENND4B-207ENST00000477746 SHROOM4Q9ULL8 1493 aa32.96■■■□□ 2.87
DENND4B-207ENST00000477746 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
DENND4B-207ENST00000477746 CECR2Q9BXF3 1484 aa32.66■■■□□ 2.82
DENND4B-207ENST00000477746 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
DENND4B-207ENST00000477746 NCAPD3P42695 1498 aa31.64■■■□□ 2.66
DENND4B-207ENST00000477746 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
DENND4B-207ENST00000477746 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
DENND4B-207ENST00000477746 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
DENND4B-207ENST00000477746 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
DENND4B-207ENST00000477746 HMGXB3Q12766 1538 aa31.38■■■□□ 2.61
DENND4B-207ENST00000477746 ERCC6Q03468 1493 aa31.36■■■□□ 2.61
DENND4B-207ENST00000477746 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
DENND4B-207ENST00000477746 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
DENND4B-207ENST00000477746 NESP48681 1621 aa31.17■■■□□ 2.58
DENND4B-207ENST00000477746 PEG3Q9GZU2 1588 aa31.16■■■□□ 2.58
DENND4B-207ENST00000477746 CUX2O14529 1486 aa31.15■■■□□ 2.58
DENND4B-207ENST00000477746 DNAJC5Q9H3Z4 198 aa31.1■■■□□ 2.57
DENND4B-207ENST00000477746 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
DENND4B-207ENST00000477746 WIZO95785 1651 aa30.82■■■□□ 2.52
DENND4B-207ENST00000477746 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
DENND4B-207ENST00000477746 CADPSQ9ULU8 1353 aa30.74■■■□□ 2.51
DENND4B-207ENST00000477746 THOC2Q8NI27 1593 aaKnown RBP30.74■■■□□ 2.51
DENND4B-207ENST00000477746 KIF21AQ7Z4S6 1674 aa30.68■■■□□ 2.5
DENND4B-207ENST00000477746 RSF1Q96T23 1441 aaPredicted RBP30.62■■■□□ 2.49
DENND4B-207ENST00000477746 MRC2Q9UBG0 1479 aa30.5■■■□□ 2.47
DENND4B-207ENST00000477746 TOP2AP11388 1531 aaKnown RBP30.44■■■□□ 2.46
DENND4B-207ENST00000477746 CEP164Q9UPV0 1460 aa30.41■■■□□ 2.46
DENND4B-207ENST00000477746 FANCD2Q9BXW9 1451 aa30.39■■■□□ 2.46
DENND4B-207ENST00000477746 WDR62O43379 1518 aa30.37■■■□□ 2.45
DENND4B-207ENST00000477746 CFTRP13569 1480 aa30.36■■■□□ 2.45
DENND4B-207ENST00000477746 CCDC88BA6NC98 1476 aa30.14■■■□□ 2.42
DENND4B-207ENST00000477746 URB2Q14146 1524 aaKnown RBP30.11■■■□□ 2.41
DENND4B-207ENST00000477746 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
DENND4B-207ENST00000477746 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
DENND4B-207ENST00000477746 OSCARQ8IYS5 282 aa29.86■■■□□ 2.37
DENND4B-207ENST00000477746 TOPBP1Q92547 1522 aa29.8■■■□□ 2.36
DENND4B-207ENST00000477746 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
DENND4B-207ENST00000477746 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
DENND4B-207ENST00000477746 ABCC8Q09428 1581 aa29.72■■■□□ 2.35
DENND4B-207ENST00000477746 DNMBPQ6XZF7 1577 aa29.68■■■□□ 2.34
DENND4B-207ENST00000477746 EIF4G3O43432 1585 aaKnown RBP29.53■■■□□ 2.32
DENND4B-207ENST00000477746 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
DENND4B-207ENST00000477746 AQRO60306 1485 aaKnown RBP eCLIP29.53■■■□□ 2.325e-7■■■■□ 23.3
DENND4B-207ENST00000477746 POLA1P09884 1462 aaPredicted RBP29.5■■■□□ 2.31
DENND4B-207ENST00000477746 TARBP1Q13395 1621 aaKnown RBP29.46■■■□□ 2.31
DENND4B-207ENST00000477746 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.31
DENND4B-207ENST00000477746 FBLN2P98095 1184 aa29.45■■■□□ 2.31
DENND4B-207ENST00000477746 SOGA1O94964 1423 aa29.43■■■□□ 2.3
DENND4B-207ENST00000477746 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
DENND4B-207ENST00000477746 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
DENND4B-207ENST00000477746 RIMBP3CA6NJZ7 1639 aa29.34■■■□□ 2.29
DENND4B-207ENST00000477746 RIMBP3BA6NNM3 1639 aa29.34■■■□□ 2.29
DENND4B-207ENST00000477746 RIMBP3Q9UFD9 1639 aa29.34■■■□□ 2.29
DENND4B-207ENST00000477746 CUX1P39880 1505 aa29.32■■■□□ 2.28
DENND4B-207ENST00000477746 ARHGEF11O15085 1522 aa29.3■■■□□ 2.28
DENND4B-207ENST00000477746 CHD1O14646 1710 aa29.26■■■□□ 2.27
DENND4B-207ENST00000477746 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
DENND4B-207ENST00000477746 CYB5RLQ6IPT4 315 aa29.21■■■□□ 2.27
DENND4B-207ENST00000477746 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
DENND4B-207ENST00000477746 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
DENND4B-207ENST00000477746 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
DENND4B-207ENST00000477746 MAGI1Q96QZ7 1491 aaPredicted RBP29.09■■■□□ 2.25
DENND4B-207ENST00000477746 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
DENND4B-207ENST00000477746 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
DENND4B-207ENST00000477746 SYNJ2O15056 1496 aa29.01■■■□□ 2.23
DENND4B-207ENST00000477746 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
DENND4B-207ENST00000477746 SYNJ1O43426 1573 aa28.98■■■□□ 2.23
DENND4B-207ENST00000477746 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.23
DENND4B-207ENST00000477746 CLASP1Q7Z460 1538 aa28.94■■■□□ 2.22
DENND4B-207ENST00000477746 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
DENND4B-207ENST00000477746 TRHP20396 242 aaPredicted RBP28.91■■■□□ 2.22
DENND4B-207ENST00000477746 ABCA5Q8WWZ7 1642 aa28.89■■■□□ 2.22
DENND4B-207ENST00000477746 TOP2BQ02880 1626 aa28.83■■■□□ 2.21
DENND4B-207ENST00000477746 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
DENND4B-207ENST00000477746 GRIN2AQ12879 1464 aa28.74■■■□□ 2.19
DENND4B-207ENST00000477746 ADAMTS12P58397 1594 aa28.71■■■□□ 2.19
DENND4B-207ENST00000477746 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
DENND4B-207ENST00000477746 NUP160Q12769 1436 aa28.61■■■□□ 2.17
DENND4B-207ENST00000477746 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
DENND4B-207ENST00000477746 CEP170Q5SW79 1584 aa28.61■■■□□ 2.17
DENND4B-207ENST00000477746 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
DENND4B-207ENST00000477746 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
DENND4B-207ENST00000477746 PRG4Q92954 1404 aaPredicted RBP28.42■■■□□ 2.14
DENND4B-207ENST00000477746 SHROOM2Q13796 1616 aa28.4■■■□□ 2.14
DENND4B-207ENST00000477746 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
DENND4B-207ENST00000477746 IGF1RP08069 1367 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms