RNA–Protein interactions for RNA: ENST00000477603.5

PRIMA1-204, Transcript of proline rich membrane anchor 1, humanhuman

TSL 1 (best)

Gene PRIMA1, Length 1,081 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-204ENST00000477603 NISCHQ9Y2I1 1504 aa38.35■■■■□ 3.73
PRIMA1-204ENST00000477603 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
PRIMA1-204ENST00000477603 ABCC9O60706 1549 aa34.08■■■■□ 3.05
PRIMA1-204ENST00000477603 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
PRIMA1-204ENST00000477603 NACADO15069 1562 aa32.43■■■□□ 2.78
PRIMA1-204ENST00000477603 DCAF8L2P0C7V8 631 aa32.09■■■□□ 2.73
PRIMA1-204ENST00000477603 MYO15BQ96JP2 1530 aa32.09■■■□□ 2.73
PRIMA1-204ENST00000477603 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
PRIMA1-204ENST00000477603 ZCCHC6Q5VYS8 1495 aaKnown RBP31.86■■■□□ 2.69
PRIMA1-204ENST00000477603 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
PRIMA1-204ENST00000477603 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
PRIMA1-204ENST00000477603 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
PRIMA1-204ENST00000477603 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
PRIMA1-204ENST00000477603 SHROOM4Q9ULL8 1493 aa31.29■■■□□ 2.6
PRIMA1-204ENST00000477603 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
PRIMA1-204ENST00000477603 CC2D2AQ9P2K1 1620 aa30.84■■■□□ 2.53
PRIMA1-204ENST00000477603 EIF4G1Q04637 1599 aaKnown RBP30.84■■■□□ 2.53
PRIMA1-204ENST00000477603 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
PRIMA1-204ENST00000477603 SMARCA4P51532 1647 aa29.91■■■□□ 2.38
PRIMA1-204ENST00000477603 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
PRIMA1-204ENST00000477603 ATAD2BQ9ULI0 1458 aa29.84■■■□□ 2.37
PRIMA1-204ENST00000477603 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
PRIMA1-204ENST00000477603 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
PRIMA1-204ENST00000477603 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
PRIMA1-204ENST00000477603 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
PRIMA1-204ENST00000477603 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
PRIMA1-204ENST00000477603 MROH2BQ7Z745 1585 aa29.55■■■□□ 2.32
PRIMA1-204ENST00000477603 ERCC6Q03468 1493 aa29.41■■■□□ 2.3
PRIMA1-204ENST00000477603 NESP48681 1621 aa29.34■■■□□ 2.29
PRIMA1-204ENST00000477603 CUX2O14529 1486 aa29.34■■■□□ 2.29
PRIMA1-204ENST00000477603 LAMC3Q9Y6N6 1575 aa29.23■■■□□ 2.27
PRIMA1-204ENST00000477603 WIZO95785 1651 aa29.21■■■□□ 2.27
PRIMA1-204ENST00000477603 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
PRIMA1-204ENST00000477603 KIF21AQ7Z4S6 1674 aa29.05■■■□□ 2.24
PRIMA1-204ENST00000477603 PDS5BQ9NTI5 1447 aa29■■■□□ 2.23
PRIMA1-204ENST00000477603 DNAJC5Q9H3Z4 198 aa28.99■■■□□ 2.23
PRIMA1-204ENST00000477603 RSF1Q96T23 1441 aaPredicted RBP28.99■■■□□ 2.23
PRIMA1-204ENST00000477603 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
PRIMA1-204ENST00000477603 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.21
PRIMA1-204ENST00000477603 MRC2Q9UBG0 1479 aa28.78■■■□□ 2.2
PRIMA1-204ENST00000477603 WDR62O43379 1518 aa28.73■■■□□ 2.19
PRIMA1-204ENST00000477603 CFTRP13569 1480 aa28.72■■■□□ 2.19
PRIMA1-204ENST00000477603 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
PRIMA1-204ENST00000477603 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
PRIMA1-204ENST00000477603 PRDM2Q13029 1718 aa28.56■■■□□ 2.16
PRIMA1-204ENST00000477603 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
PRIMA1-204ENST00000477603 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
PRIMA1-204ENST00000477603 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
PRIMA1-204ENST00000477603 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
PRIMA1-204ENST00000477603 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
PRIMA1-204ENST00000477603 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
PRIMA1-204ENST00000477603 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
PRIMA1-204ENST00000477603 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
PRIMA1-204ENST00000477603 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
PRIMA1-204ENST00000477603 OSCARQ8IYS5 282 aa27.93■■■□□ 2.06
PRIMA1-204ENST00000477603 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.05
PRIMA1-204ENST00000477603 AQRO60306 1485 aaKnown RBP eCLIP27.77■■■□□ 2.04
PRIMA1-204ENST00000477603 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
PRIMA1-204ENST00000477603 CUX1P39880 1505 aa27.76■■■□□ 2.03
PRIMA1-204ENST00000477603 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
PRIMA1-204ENST00000477603 FGD5Q6ZNL6 1462 aa27.74■■■□□ 2.03
PRIMA1-204ENST00000477603 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
PRIMA1-204ENST00000477603 SOGA1O94964 1423 aa27.71■■■□□ 2.03
PRIMA1-204ENST00000477603 CHD1O14646 1710 aa27.7■■■□□ 2.03
PRIMA1-204ENST00000477603 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
PRIMA1-204ENST00000477603 RIMBP3CA6NJZ7 1639 aa27.65■■■□□ 2.02
PRIMA1-204ENST00000477603 RIMBP3BA6NNM3 1639 aa27.65■■■□□ 2.02
PRIMA1-204ENST00000477603 RIMBP3Q9UFD9 1639 aa27.65■■■□□ 2.02
PRIMA1-204ENST00000477603 TDRD9Q8NDG6 1382 aaKnown RBP27.61■■■□□ 2.01
PRIMA1-204ENST00000477603 ARHGEF11O15085 1522 aa27.57■■■□□ 2
PRIMA1-204ENST00000477603 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
PRIMA1-204ENST00000477603 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
PRIMA1-204ENST00000477603 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
PRIMA1-204ENST00000477603 FBLN2P98095 1184 aa27.47■■□□□ 1.99
PRIMA1-204ENST00000477603 PBRM1Q86U86 1689 aa27.46■■□□□ 1.99
PRIMA1-204ENST00000477603 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
PRIMA1-204ENST00000477603 ABCA5Q8WWZ7 1642 aa27.44■■□□□ 1.98
PRIMA1-204ENST00000477603 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
PRIMA1-204ENST00000477603 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
PRIMA1-204ENST00000477603 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
PRIMA1-204ENST00000477603 SYNJ2O15056 1496 aa27.39■■□□□ 1.98
PRIMA1-204ENST00000477603 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.98
PRIMA1-204ENST00000477603 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
PRIMA1-204ENST00000477603 WRNQ14191 1432 aaPredicted RBP eCLIP27.34■■□□□ 1.97
PRIMA1-204ENST00000477603 CHMP7Q8WUX9 453 aaPredicted RBP27.33■■□□□ 1.97
PRIMA1-204ENST00000477603 ARAP1Q96P48 1450 aa27.32■■□□□ 1.96
PRIMA1-204ENST00000477603 CYB5RLQ6IPT4 315 aa27.23■■□□□ 1.95
PRIMA1-204ENST00000477603 ADAMTS12P58397 1594 aa27.21■■□□□ 1.95
PRIMA1-204ENST00000477603 GRIN2AQ12879 1464 aa27.15■■□□□ 1.94
PRIMA1-204ENST00000477603 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
PRIMA1-204ENST00000477603 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
PRIMA1-204ENST00000477603 CEP170Q5SW79 1584 aa27.06■■□□□ 1.92
PRIMA1-204ENST00000477603 NUP160Q12769 1436 aa27.06■■□□□ 1.92
PRIMA1-204ENST00000477603 SHROOM2Q13796 1616 aa26.96■■□□□ 1.91
PRIMA1-204ENST00000477603 ERCC6L2Q5T890 1561 aa26.93■■□□□ 1.9
PRIMA1-204ENST00000477603 TRHP20396 242 aaPredicted RBP26.85■■□□□ 1.89
PRIMA1-204ENST00000477603 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
PRIMA1-204ENST00000477603 KIF27Q86VH2 1401 aa26.81■■□□□ 1.88
PRIMA1-204ENST00000477603 CUL7Q14999 1698 aa26.79■■□□□ 1.88
PRIMA1-204ENST00000477603 IGF1RP08069 1367 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms