RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 NISCHQ9Y2I1 1504 aa38.69■■■■□ 3.78
CLDN11-204ENST00000477531 CCDC180Q9P1Z9 1646 aa34.56■■■■□ 3.12
CLDN11-204ENST00000477531 ABCC9O60706 1549 aa34.34■■■■□ 3.09
CLDN11-204ENST00000477531 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.84
CLDN11-204ENST00000477531 DCAF8L2P0C7V8 631 aa32.7■■■□□ 2.83
CLDN11-204ENST00000477531 NACADO15069 1562 aa32.66■■■□□ 2.82
CLDN11-204ENST00000477531 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
CLDN11-204ENST00000477531 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
CLDN11-204ENST00000477531 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
CLDN11-204ENST00000477531 DCAF1Q9Y4B6 1507 aa31.97■■■□□ 2.71
CLDN11-204ENST00000477531 UNC13AQ9UPW8 1703 aa31.95■■■□□ 2.7
CLDN11-204ENST00000477531 DNAJC5BQ9UF47 199 aa31.91■■■□□ 2.7
CLDN11-204ENST00000477531 BICRAQ9NZM4 1560 aa31.75■■■□□ 2.67
CLDN11-204ENST00000477531 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
CLDN11-204ENST00000477531 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
CLDN11-204ENST00000477531 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
CLDN11-204ENST00000477531 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
CLDN11-204ENST00000477531 CECR2Q9BXF3 1484 aa30.92■■■□□ 2.54
CLDN11-204ENST00000477531 NCAPD3P42695 1498 aa30.14■■■□□ 2.42
CLDN11-204ENST00000477531 SMARCA4P51532 1647 aa30.1■■■□□ 2.41
CLDN11-204ENST00000477531 ATAD2BQ9ULI0 1458 aa30.09■■■□□ 2.41
CLDN11-204ENST00000477531 SMARCA2P51531 1590 aa30.05■■■□□ 2.4
CLDN11-204ENST00000477531 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
CLDN11-204ENST00000477531 HMGXB3Q12766 1538 aa29.92■■■□□ 2.38
CLDN11-204ENST00000477531 BAZ1BQ9UIG0 1483 aaKnown RBP29.84■■■□□ 2.37
CLDN11-204ENST00000477531 MROH2BQ7Z745 1585 aa29.79■■■□□ 2.36
CLDN11-204ENST00000477531 PEG3Q9GZU2 1588 aa29.79■■■□□ 2.36
CLDN11-204ENST00000477531 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
CLDN11-204ENST00000477531 NESP48681 1621 aa29.53■■■□□ 2.32
CLDN11-204ENST00000477531 CUX2O14529 1486 aa29.49■■■□□ 2.31
CLDN11-204ENST00000477531 WIZO95785 1651 aa29.43■■■□□ 2.3
CLDN11-204ENST00000477531 LAMC3Q9Y6N6 1575 aa29.42■■■□□ 2.3
CLDN11-204ENST00000477531 RSF1Q96T23 1441 aaPredicted RBP29.31■■■□□ 2.28
CLDN11-204ENST00000477531 PDS5BQ9NTI5 1447 aa29.31■■■□□ 2.28
CLDN11-204ENST00000477531 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
CLDN11-204ENST00000477531 DNAJC5Q9H3Z4 198 aa29.17■■■□□ 2.26
CLDN11-204ENST00000477531 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
CLDN11-204ENST00000477531 KIF21AQ7Z4S6 1674 aa29.14■■■□□ 2.26
CLDN11-204ENST00000477531 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
CLDN11-204ENST00000477531 MRC2Q9UBG0 1479 aa28.98■■■□□ 2.23
CLDN11-204ENST00000477531 CFTRP13569 1480 aa28.97■■■□□ 2.23
CLDN11-204ENST00000477531 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
CLDN11-204ENST00000477531 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
CLDN11-204ENST00000477531 WDR62O43379 1518 aa28.86■■■□□ 2.21
CLDN11-204ENST00000477531 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
CLDN11-204ENST00000477531 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
CLDN11-204ENST00000477531 URB2Q14146 1524 aaKnown RBP28.62■■■□□ 2.17
CLDN11-204ENST00000477531 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
CLDN11-204ENST00000477531 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
CLDN11-204ENST00000477531 IFT140Q96RY7 1462 aa28.36■■■□□ 2.13
CLDN11-204ENST00000477531 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
CLDN11-204ENST00000477531 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
CLDN11-204ENST00000477531 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
CLDN11-204ENST00000477531 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
CLDN11-204ENST00000477531 POLA1P09884 1462 aaPredicted RBP28.11■■■□□ 2.09
CLDN11-204ENST00000477531 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
CLDN11-204ENST00000477531 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
CLDN11-204ENST00000477531 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
CLDN11-204ENST00000477531 SOGA1O94964 1423 aa28.05■■■□□ 2.08
CLDN11-204ENST00000477531 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.08
CLDN11-204ENST00000477531 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.07
CLDN11-204ENST00000477531 CUX1P39880 1505 aa27.98■■■□□ 2.07
CLDN11-204ENST00000477531 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
CLDN11-204ENST00000477531 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
CLDN11-204ENST00000477531 FBLN2P98095 1184 aa27.92■■■□□ 2.06
CLDN11-204ENST00000477531 WDR97A6NE52 1622 aa27.86■■■□□ 2.05
CLDN11-204ENST00000477531 CHD1O14646 1710 aa27.79■■■□□ 2.04
CLDN11-204ENST00000477531 GRIN2BQ13224 1484 aa27.76■■■□□ 2.04
CLDN11-204ENST00000477531 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.04
CLDN11-204ENST00000477531 CHMP7Q8WUX9 453 aaPredicted RBP27.75■■■□□ 2.03
CLDN11-204ENST00000477531 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
CLDN11-204ENST00000477531 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
CLDN11-204ENST00000477531 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
CLDN11-204ENST00000477531 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
CLDN11-204ENST00000477531 ARHGEF11O15085 1522 aa27.71■■■□□ 2.03
CLDN11-204ENST00000477531 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.03
CLDN11-204ENST00000477531 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
CLDN11-204ENST00000477531 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
CLDN11-204ENST00000477531 SYNJ2O15056 1496 aa27.62■■■□□ 2.01
CLDN11-204ENST00000477531 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
CLDN11-204ENST00000477531 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
CLDN11-204ENST00000477531 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
CLDN11-204ENST00000477531 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
CLDN11-204ENST00000477531 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
CLDN11-204ENST00000477531 ABCA5Q8WWZ7 1642 aa27.56■■■□□ 2
CLDN11-204ENST00000477531 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
CLDN11-204ENST00000477531 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
CLDN11-204ENST00000477531 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
CLDN11-204ENST00000477531 FHAD1B1AJZ9 1412 aa27.37■■□□□ 1.97
CLDN11-204ENST00000477531 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
CLDN11-204ENST00000477531 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
CLDN11-204ENST00000477531 NUP160Q12769 1436 aa27.26■■□□□ 1.95
CLDN11-204ENST00000477531 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
CLDN11-204ENST00000477531 CEP170Q5SW79 1584 aa27.21■■□□□ 1.95
CLDN11-204ENST00000477531 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
CLDN11-204ENST00000477531 IGF1RP08069 1367 aa27.09■■□□□ 1.93
CLDN11-204ENST00000477531 JPH4Q96JJ6 628 aa27.07■■□□□ 1.92
CLDN11-204ENST00000477531 ERCC6L2Q5T890 1561 aa27.06■■□□□ 1.92
CLDN11-204ENST00000477531 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
CLDN11-204ENST00000477531 PRG4Q92954 1404 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms