RNA–Protein interactions for RNA: ENST00000477522.6

PARP9-205, Transcript of poly(ADP-ribose) polymerase family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARP9, Length 3,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP9-205ENST00000477522 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
PARP9-205ENST00000477522 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
PARP9-205ENST00000477522 ABCC9O60706 1549 aa16.29■□□□□ 0.2
PARP9-205ENST00000477522 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
PARP9-205ENST00000477522 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
PARP9-205ENST00000477522 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
PARP9-205ENST00000477522 NACADO15069 1562 aa15.96■□□□□ 0.14
PARP9-205ENST00000477522 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
PARP9-205ENST00000477522 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
PARP9-205ENST00000477522 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
PARP9-205ENST00000477522 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
PARP9-205ENST00000477522 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.03
PARP9-205ENST00000477522 CUX2O14529 1486 aa15.17■□□□□ 0.02
PARP9-205ENST00000477522 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
PARP9-205ENST00000477522 EIF4G1Q04637 1599 aaKnown RBP15.06■□□□□ 0
PARP9-205ENST00000477522 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
PARP9-205ENST00000477522 HRCP23327 699 aa14.88□□□□□ -0.03
PARP9-205ENST00000477522 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
PARP9-205ENST00000477522 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
PARP9-205ENST00000477522 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
PARP9-205ENST00000477522 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
PARP9-205ENST00000477522 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
PARP9-205ENST00000477522 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
PARP9-205ENST00000477522 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
PARP9-205ENST00000477522 PEG3Q9GZU2 1588 aa14.44□□□□□ -0.1
PARP9-205ENST00000477522 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
PARP9-205ENST00000477522 LAMC3Q9Y6N6 1575 aa14.43□□□□□ -0.1
PARP9-205ENST00000477522 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
PARP9-205ENST00000477522 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
PARP9-205ENST00000477522 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
PARP9-205ENST00000477522 WDR62O43379 1518 aa14.22□□□□□ -0.13
PARP9-205ENST00000477522 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
PARP9-205ENST00000477522 PCGF6Q9BYE7 350 aa14.21□□□□□ -0.13
PARP9-205ENST00000477522 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
PARP9-205ENST00000477522 MYT1Q01538 1121 aa14.2□□□□□ -0.14
PARP9-205ENST00000477522 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
PARP9-205ENST00000477522 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
PARP9-205ENST00000477522 TRIM26Q12899 539 aaPredicted RBP14.13□□□□□ -0.15
PARP9-205ENST00000477522 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
PARP9-205ENST00000477522 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
PARP9-205ENST00000477522 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
PARP9-205ENST00000477522 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
PARP9-205ENST00000477522 PRDM2Q13029 1718 aa13.96□□□□□ -0.18
PARP9-205ENST00000477522 WDR97A6NE52 1622 aa13.95□□□□□ -0.18
PARP9-205ENST00000477522 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
PARP9-205ENST00000477522 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
PARP9-205ENST00000477522 DCAF8L2P0C7V8 631 aa13.87□□□□□ -0.19
PARP9-205ENST00000477522 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
PARP9-205ENST00000477522 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
PARP9-205ENST00000477522 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
PARP9-205ENST00000477522 NESP48681 1621 aa13.82□□□□□ -0.2
PARP9-205ENST00000477522 CADPSQ9ULU8 1353 aa13.82□□□□□ -0.2
PARP9-205ENST00000477522 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
PARP9-205ENST00000477522 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
PARP9-205ENST00000477522 LOC105371045A0A1W2PR82 267 aa13.73□□□□□ -0.21
PARP9-205ENST00000477522 ABCC8Q09428 1581 aa13.71□□□□□ -0.21
PARP9-205ENST00000477522 CFTRP13569 1480 aa13.69□□□□□ -0.22
PARP9-205ENST00000477522 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
PARP9-205ENST00000477522 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
PARP9-205ENST00000477522 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
PARP9-205ENST00000477522 ARHGEF11O15085 1522 aa13.68□□□□□ -0.22
PARP9-205ENST00000477522 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
PARP9-205ENST00000477522 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
PARP9-205ENST00000477522 CENPBP07199 599 aaPredicted RBP13.54□□□□□ -0.24
PARP9-205ENST00000477522 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.24
PARP9-205ENST00000477522 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
PARP9-205ENST00000477522 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
PARP9-205ENST00000477522 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
PARP9-205ENST00000477522 NEUROD1Q13562 356 aa13.49□□□□□ -0.25
PARP9-205ENST00000477522 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
PARP9-205ENST00000477522 ARAP1Q96P48 1450 aa13.47□□□□□ -0.25
PARP9-205ENST00000477522 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.25
PARP9-205ENST00000477522 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.26
PARP9-205ENST00000477522 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.26
PARP9-205ENST00000477522 TTBK1Q5TCY1 1321 aaPredicted RBP13.45□□□□□ -0.26
PARP9-205ENST00000477522 CHD1O14646 1710 aa13.45□□□□□ -0.26
PARP9-205ENST00000477522 AEBP2Q6ZN18 517 aaPredicted RBP13.42□□□□□ -0.26
PARP9-205ENST00000477522 SYNJ1O43426 1573 aa13.39□□□□□ -0.27
PARP9-205ENST00000477522 GTF3C3Q9Y5Q9 886 aa13.39□□□□□ -0.27
PARP9-205ENST00000477522 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
PARP9-205ENST00000477522 DIEXFQ68CQ4 756 aaKnown RBP13.36□□□□□ -0.27
PARP9-205ENST00000477522 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
PARP9-205ENST00000477522 TOPBP1Q92547 1522 aa13.33□□□□□ -0.27
PARP9-205ENST00000477522 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
PARP9-205ENST00000477522 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
PARP9-205ENST00000477522 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.28
PARP9-205ENST00000477522 WIZO95785 1651 aa13.26□□□□□ -0.29
PARP9-205ENST00000477522 BCL11AQ9H165 835 aa13.25□□□□□ -0.29
PARP9-205ENST00000477522 CCER1Q8TC90 406 aaPredicted RBP13.23□□□□□ -0.29
PARP9-205ENST00000477522 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
PARP9-205ENST00000477522 EEA1Q15075 1411 aa13.21□□□□□ -0.29
PARP9-205ENST00000477522 ERCC6L2Q5T890 1561 aa13.19□□□□□ -0.3
PARP9-205ENST00000477522 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
PARP9-205ENST00000477522 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
PARP9-205ENST00000477522 SYNJ2O15056 1496 aa13.17□□□□□ -0.3
PARP9-205ENST00000477522 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
PARP9-205ENST00000477522 MAPKBP1O60336 1514 aa13.16□□□□□ -0.3
PARP9-205ENST00000477522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
PARP9-205ENST00000477522 PBRM1Q86U86 1689 aa13.13□□□□□ -0.31
PARP9-205ENST00000477522 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms