RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 NISCHQ9Y2I1 1504 aa43.95■■■■■ 4.63
C4A-253ENST00000477424 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
C4A-253ENST00000477424 ABCC9O60706 1549 aa38.5■■■■□ 3.75
C4A-253ENST00000477424 RB1CC1Q8TDY2 1594 aa36.94■■■■□ 3.5
C4A-253ENST00000477424 NACADO15069 1562 aa36.84■■■■□ 3.49
C4A-253ENST00000477424 DCAF8L2P0C7V8 631 aa36.64■■■■□ 3.46
C4A-253ENST00000477424 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
C4A-253ENST00000477424 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
C4A-253ENST00000477424 DCAF1Q9Y4B6 1507 aa36.34■■■■□ 3.41
C4A-253ENST00000477424 UNC13AQ9UPW8 1703 aa36.31■■■■□ 3.4
C4A-253ENST00000477424 BICRAQ9NZM4 1560 aa35.93■■■■□ 3.34
C4A-253ENST00000477424 PABPN1Q86U42 306 aaKnown RBP eCLIP35.88■■■■□ 3.33
C4A-253ENST00000477424 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
C4A-253ENST00000477424 DNAJC5BQ9UF47 199 aa35.48■■■■□ 3.27
C4A-253ENST00000477424 SHROOM4Q9ULL8 1493 aa35.4■■■■□ 3.26
C4A-253ENST00000477424 EIF4G1Q04637 1599 aaKnown RBP34.94■■■■□ 3.18
C4A-253ENST00000477424 CC2D2AQ9P2K1 1620 aa34.86■■■■□ 3.17
C4A-253ENST00000477424 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
C4A-253ENST00000477424 SMARCA4P51532 1647 aa34.2■■■■□ 3.07
C4A-253ENST00000477424 BAZ1AQ9NRL2 1556 aaPredicted RBP34.07■■■■□ 3.05
C4A-253ENST00000477424 ATAD2BQ9ULI0 1458 aa34■■■■□ 3.03
C4A-253ENST00000477424 NCAPD3P42695 1498 aa33.96■■■■□ 3.03
C4A-253ENST00000477424 SMARCA2P51531 1590 aa33.94■■■■□ 3.02
C4A-253ENST00000477424 MROH2BQ7Z745 1585 aa33.92■■■■□ 3.02
C4A-253ENST00000477424 HMGXB3Q12766 1538 aa33.85■■■■□ 3.01
C4A-253ENST00000477424 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
C4A-253ENST00000477424 BAZ1BQ9UIG0 1483 aaKnown RBP33.69■■■□□ 2.98
C4A-253ENST00000477424 WIZO95785 1651 aa33.58■■■□□ 2.97
C4A-253ENST00000477424 RSF1Q96T23 1441 aaPredicted RBP33.4■■■□□ 2.94
C4A-253ENST00000477424 NESP48681 1621 aa33.31■■■□□ 2.92
C4A-253ENST00000477424 TOP2AP11388 1531 aaKnown RBP33.16■■■□□ 2.9
C4A-253ENST00000477424 LAMC3Q9Y6N6 1575 aa33.14■■■□□ 2.9
C4A-253ENST00000477424 ERCC6Q03468 1493 aa33.13■■■□□ 2.89
C4A-253ENST00000477424 KIF21AQ7Z4S6 1674 aa32.98■■■□□ 2.87
C4A-253ENST00000477424 CADPSQ9ULU8 1353 aa32.95■■■□□ 2.86
C4A-253ENST00000477424 THOC2Q8NI27 1593 aaKnown RBP32.89■■■□□ 2.86
C4A-253ENST00000477424 CUX2O14529 1486 aa32.86■■■□□ 2.85
C4A-253ENST00000477424 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
C4A-253ENST00000477424 CFTRP13569 1480 aa32.75■■■□□ 2.83
C4A-253ENST00000477424 CCDC88BA6NC98 1476 aa32.74■■■□□ 2.83
C4A-253ENST00000477424 PRDM2Q13029 1718 aa32.67■■■□□ 2.82
C4A-253ENST00000477424 FANCD2Q9BXW9 1451 aa32.62■■■□□ 2.81
C4A-253ENST00000477424 MRC2Q9UBG0 1479 aa32.6■■■□□ 2.81
C4A-253ENST00000477424 CEP164Q9UPV0 1460 aa32.6■■■□□ 2.81
C4A-253ENST00000477424 WDR62O43379 1518 aa32.54■■■□□ 2.8
C4A-253ENST00000477424 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
C4A-253ENST00000477424 SUPT5HO00267 1087 aaKnown RBP32.34■■■□□ 2.77
C4A-253ENST00000477424 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
C4A-253ENST00000477424 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
C4A-253ENST00000477424 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
C4A-253ENST00000477424 ABCC8Q09428 1581 aa31.98■■■□□ 2.71
C4A-253ENST00000477424 IFT140Q96RY7 1462 aa31.9■■■□□ 2.7
C4A-253ENST00000477424 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
C4A-253ENST00000477424 CUX1P39880 1505 aa31.84■■■□□ 2.69
C4A-253ENST00000477424 TARBP1Q13395 1621 aaKnown RBP31.82■■■□□ 2.69
C4A-253ENST00000477424 POLA1P09884 1462 aaPredicted RBP31.82■■■□□ 2.68
C4A-253ENST00000477424 EIF4G3O43432 1585 aaKnown RBP31.76■■■□□ 2.67
C4A-253ENST00000477424 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
C4A-253ENST00000477424 RAD54L2Q9Y4B4 1467 aa31.69■■■□□ 2.66
C4A-253ENST00000477424 SOGA1O94964 1423 aa31.61■■■□□ 2.65
C4A-253ENST00000477424 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.65
C4A-253ENST00000477424 WDR97A6NE52 1622 aa31.59■■■□□ 2.65
C4A-253ENST00000477424 BIVM-ERCC5R4GMW8 1640 aa31.54■■■□□ 2.64
C4A-253ENST00000477424 SYNJ1O43426 1573 aa31.53■■■□□ 2.64
C4A-253ENST00000477424 TOP2BQ02880 1626 aa31.5■■■□□ 2.63
C4A-253ENST00000477424 TDRD9Q8NDG6 1382 aaKnown RBP31.48■■■□□ 2.63
C4A-253ENST00000477424 WRNQ14191 1432 aaPredicted RBP eCLIP31.48■■■□□ 2.63
C4A-253ENST00000477424 CHD1O14646 1710 aa31.44■■■□□ 2.62
C4A-253ENST00000477424 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.61
C4A-253ENST00000477424 PBRM1Q86U86 1689 aa31.37■■■□□ 2.61
C4A-253ENST00000477424 ABCA5Q8WWZ7 1642 aa31.36■■■□□ 2.61
C4A-253ENST00000477424 OSCARQ8IYS5 282 aa31.36■■■□□ 2.61
C4A-253ENST00000477424 SNAPC4Q5SXM2 1469 aa31.33■■■□□ 2.61
C4A-253ENST00000477424 GRIN2BQ13224 1484 aa31.28■■■□□ 2.6
C4A-253ENST00000477424 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
C4A-253ENST00000477424 MAGI1Q96QZ7 1491 aaPredicted RBP31.23■■■□□ 2.59
C4A-253ENST00000477424 FBLN2P98095 1184 aa31.14■■■□□ 2.58
C4A-253ENST00000477424 SYNJ2O15056 1496 aa31.12■■■□□ 2.57
C4A-253ENST00000477424 RIMBP3CA6NJZ7 1639 aa31.09■■■□□ 2.57
C4A-253ENST00000477424 RIMBP3BA6NNM3 1639 aa31.09■■■□□ 2.57
C4A-253ENST00000477424 RIMBP3Q9UFD9 1639 aa31.09■■■□□ 2.57
C4A-253ENST00000477424 ADAMTS12P58397 1594 aa31.07■■■□□ 2.56
C4A-253ENST00000477424 CLASP1Q7Z460 1538 aa31.03■■■□□ 2.56
C4A-253ENST00000477424 ARHGEF11O15085 1522 aa31.02■■■□□ 2.56
C4A-253ENST00000477424 CHMP7Q8WUX9 453 aaPredicted RBP31.01■■■□□ 2.55
C4A-253ENST00000477424 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
C4A-253ENST00000477424 GRIN2AQ12879 1464 aa30.92■■■□□ 2.54
C4A-253ENST00000477424 TRIM41Q8WV44 630 aa30.89■■■□□ 2.54
C4A-253ENST00000477424 FHAD1B1AJZ9 1412 aa30.89■■■□□ 2.53
C4A-253ENST00000477424 CEP170Q5SW79 1584 aa30.84■■■□□ 2.53
C4A-253ENST00000477424 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
C4A-253ENST00000477424 NUP160Q12769 1436 aa30.79■■■□□ 2.52
C4A-253ENST00000477424 ARAP1Q96P48 1450 aa30.77■■■□□ 2.52
C4A-253ENST00000477424 CUL7Q14999 1698 aa30.73■■■□□ 2.51
C4A-253ENST00000477424 IGF1RP08069 1367 aa30.7■■■□□ 2.51
C4A-253ENST00000477424 SHROOM2Q13796 1616 aa30.65■■■□□ 2.5
C4A-253ENST00000477424 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
C4A-253ENST00000477424 ERCC6L2Q5T890 1561 aa30.62■■■□□ 2.49
C4A-253ENST00000477424 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
C4A-253ENST00000477424 CARMIL1Q5VZK9 1371 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms