RNA–Protein interactions for RNA: ENST00000477410.1

PREPL-214, Transcript of prolyl endopeptidase like, humanhuman

TSL 4

Gene PREPL, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREPL-214ENST00000477410 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
PREPL-214ENST00000477410 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
PREPL-214ENST00000477410 ABCC9O60706 1549 aa27.57■■■□□ 2
PREPL-214ENST00000477410 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
PREPL-214ENST00000477410 NACADO15069 1562 aa26.24■■□□□ 1.79
PREPL-214ENST00000477410 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
PREPL-214ENST00000477410 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
PREPL-214ENST00000477410 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
PREPL-214ENST00000477410 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
PREPL-214ENST00000477410 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
PREPL-214ENST00000477410 BICRAQ9NZM4 1560 aa25.66■■□□□ 1.7
PREPL-214ENST00000477410 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
PREPL-214ENST00000477410 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
PREPL-214ENST00000477410 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
PREPL-214ENST00000477410 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
PREPL-214ENST00000477410 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
PREPL-214ENST00000477410 EIF4G1Q04637 1599 aaKnown RBP24.98■■□□□ 1.59
PREPL-214ENST00000477410 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
PREPL-214ENST00000477410 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
PREPL-214ENST00000477410 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
PREPL-214ENST00000477410 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
PREPL-214ENST00000477410 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
PREPL-214ENST00000477410 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
PREPL-214ENST00000477410 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
PREPL-214ENST00000477410 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
PREPL-214ENST00000477410 CUX2O14529 1486 aa23.87■■□□□ 1.41
PREPL-214ENST00000477410 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.41
PREPL-214ENST00000477410 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
PREPL-214ENST00000477410 ERCC6Q03468 1493 aa23.77■■□□□ 1.4
PREPL-214ENST00000477410 NESP48681 1621 aa23.73■■□□□ 1.39
PREPL-214ENST00000477410 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
PREPL-214ENST00000477410 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
PREPL-214ENST00000477410 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
PREPL-214ENST00000477410 WIZO95785 1651 aa23.5■■□□□ 1.35
PREPL-214ENST00000477410 KIF21AQ7Z4S6 1674 aa23.49■■□□□ 1.35
PREPL-214ENST00000477410 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
PREPL-214ENST00000477410 CADPSQ9ULU8 1353 aa23.41■■□□□ 1.34
PREPL-214ENST00000477410 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
PREPL-214ENST00000477410 WDR62O43379 1518 aa23.28■■□□□ 1.32
PREPL-214ENST00000477410 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.32
PREPL-214ENST00000477410 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
PREPL-214ENST00000477410 CFTRP13569 1480 aa23.22■■□□□ 1.31
PREPL-214ENST00000477410 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
PREPL-214ENST00000477410 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.29
PREPL-214ENST00000477410 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
PREPL-214ENST00000477410 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
PREPL-214ENST00000477410 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
PREPL-214ENST00000477410 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
PREPL-214ENST00000477410 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
PREPL-214ENST00000477410 ABCC8Q09428 1581 aa22.7■■□□□ 1.22
PREPL-214ENST00000477410 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
PREPL-214ENST00000477410 ZNF608Q9ULD9 1512 aaPredicted RBP22.65■■□□□ 1.22
PREPL-214ENST00000477410 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
PREPL-214ENST00000477410 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
PREPL-214ENST00000477410 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
PREPL-214ENST00000477410 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
PREPL-214ENST00000477410 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
PREPL-214ENST00000477410 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
PREPL-214ENST00000477410 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
PREPL-214ENST00000477410 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
PREPL-214ENST00000477410 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
PREPL-214ENST00000477410 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
PREPL-214ENST00000477410 CHD1O14646 1710 aa22.4■■□□□ 1.18
PREPL-214ENST00000477410 ARHGEF11O15085 1522 aa22.38■■□□□ 1.17
PREPL-214ENST00000477410 CUX1P39880 1505 aa22.36■■□□□ 1.17
PREPL-214ENST00000477410 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
PREPL-214ENST00000477410 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
PREPL-214ENST00000477410 SOGA1O94964 1423 aa22.32■■□□□ 1.16
PREPL-214ENST00000477410 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
PREPL-214ENST00000477410 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
PREPL-214ENST00000477410 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
PREPL-214ENST00000477410 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
PREPL-214ENST00000477410 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
PREPL-214ENST00000477410 ARAP1Q96P48 1450 aa22.16■■□□□ 1.14
PREPL-214ENST00000477410 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
PREPL-214ENST00000477410 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
PREPL-214ENST00000477410 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
PREPL-214ENST00000477410 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
PREPL-214ENST00000477410 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
PREPL-214ENST00000477410 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
PREPL-214ENST00000477410 FBLN2P98095 1184 aa22.08■■□□□ 1.13
PREPL-214ENST00000477410 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
PREPL-214ENST00000477410 TOP2BQ02880 1626 aa22.05■■□□□ 1.12
PREPL-214ENST00000477410 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
PREPL-214ENST00000477410 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
PREPL-214ENST00000477410 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
PREPL-214ENST00000477410 WRNQ14191 1432 aaPredicted RBP eCLIP21.99■■□□□ 1.11
PREPL-214ENST00000477410 ADAMTS12P58397 1594 aa21.95■■□□□ 1.11
PREPL-214ENST00000477410 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
PREPL-214ENST00000477410 NUP160Q12769 1436 aa21.89■■□□□ 1.09
PREPL-214ENST00000477410 ERICH3Q5RHP9 1530 aa21.88■■□□□ 1.09
PREPL-214ENST00000477410 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
PREPL-214ENST00000477410 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
PREPL-214ENST00000477410 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
PREPL-214ENST00000477410 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
PREPL-214ENST00000477410 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
PREPL-214ENST00000477410 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
PREPL-214ENST00000477410 CUL7Q14999 1698 aa21.57■■□□□ 1.04
PREPL-214ENST00000477410 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
PREPL-214ENST00000477410 IGF1RP08069 1367 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms