RNA–Protein interactions for RNA: ENST00000477398.1

IL1B-205, Transcript of interleukin 1 beta, humanhuman

TSL 2

Gene IL1B, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IL1B-205ENST00000477398 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
IL1B-205ENST00000477398 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
IL1B-205ENST00000477398 ABCC9O60706 1549 aa23.91■■□□□ 1.42
IL1B-205ENST00000477398 NACADO15069 1562 aa23.05■■□□□ 1.28
IL1B-205ENST00000477398 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
IL1B-205ENST00000477398 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
IL1B-205ENST00000477398 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
IL1B-205ENST00000477398 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
IL1B-205ENST00000477398 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
IL1B-205ENST00000477398 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.21
IL1B-205ENST00000477398 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
IL1B-205ENST00000477398 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
IL1B-205ENST00000477398 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
IL1B-205ENST00000477398 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
IL1B-205ENST00000477398 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
IL1B-205ENST00000477398 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
IL1B-205ENST00000477398 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
IL1B-205ENST00000477398 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
IL1B-205ENST00000477398 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
IL1B-205ENST00000477398 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
IL1B-205ENST00000477398 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
IL1B-205ENST00000477398 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
IL1B-205ENST00000477398 SMARCA2P51531 1590 aa21.26■□□□□ 0.99
IL1B-205ENST00000477398 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
IL1B-205ENST00000477398 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
IL1B-205ENST00000477398 HMGXB3Q12766 1538 aa21.16■□□□□ 0.98
IL1B-205ENST00000477398 WIZO95785 1651 aa21.12■□□□□ 0.97
IL1B-205ENST00000477398 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
IL1B-205ENST00000477398 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
IL1B-205ENST00000477398 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
IL1B-205ENST00000477398 NESP48681 1621 aa20.74■□□□□ 0.91
IL1B-205ENST00000477398 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
IL1B-205ENST00000477398 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
IL1B-205ENST00000477398 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
IL1B-205ENST00000477398 SUPT5HO00267 1087 aaKnown RBP20.61■□□□□ 0.89
IL1B-205ENST00000477398 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
IL1B-205ENST00000477398 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
IL1B-205ENST00000477398 CFTRP13569 1480 aa20.54■□□□□ 0.88
IL1B-205ENST00000477398 PDS5BQ9NTI5 1447 aa20.52■□□□□ 0.87
IL1B-205ENST00000477398 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
IL1B-205ENST00000477398 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
IL1B-205ENST00000477398 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
IL1B-205ENST00000477398 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
IL1B-205ENST00000477398 CUX2O14529 1486 aa20.34■□□□□ 0.85
IL1B-205ENST00000477398 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
IL1B-205ENST00000477398 WDR62O43379 1518 aa20.26■□□□□ 0.83
IL1B-205ENST00000477398 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
IL1B-205ENST00000477398 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
IL1B-205ENST00000477398 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
IL1B-205ENST00000477398 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
IL1B-205ENST00000477398 CUX1P39880 1505 aa19.99■□□□□ 0.79
IL1B-205ENST00000477398 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
IL1B-205ENST00000477398 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
IL1B-205ENST00000477398 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
IL1B-205ENST00000477398 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
IL1B-205ENST00000477398 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
IL1B-205ENST00000477398 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
IL1B-205ENST00000477398 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
IL1B-205ENST00000477398 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
IL1B-205ENST00000477398 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
IL1B-205ENST00000477398 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
IL1B-205ENST00000477398 SOGA1O94964 1423 aa19.85■□□□□ 0.77
IL1B-205ENST00000477398 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
IL1B-205ENST00000477398 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
IL1B-205ENST00000477398 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
IL1B-205ENST00000477398 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
IL1B-205ENST00000477398 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
IL1B-205ENST00000477398 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
IL1B-205ENST00000477398 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
IL1B-205ENST00000477398 ABCA5Q8WWZ7 1642 aa19.64■□□□□ 0.73
IL1B-205ENST00000477398 PBRM1Q86U86 1689 aa19.63■□□□□ 0.73
IL1B-205ENST00000477398 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
IL1B-205ENST00000477398 DNAJC5Q9H3Z4 198 aa19.61■□□□□ 0.73
IL1B-205ENST00000477398 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
IL1B-205ENST00000477398 CHD1O14646 1710 aa19.57■□□□□ 0.72
IL1B-205ENST00000477398 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
IL1B-205ENST00000477398 MAGI1Q96QZ7 1491 aaPredicted RBP19.53■□□□□ 0.72
IL1B-205ENST00000477398 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
IL1B-205ENST00000477398 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
IL1B-205ENST00000477398 FBLN2P98095 1184 aa19.46■□□□□ 0.71
IL1B-205ENST00000477398 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
IL1B-205ENST00000477398 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
IL1B-205ENST00000477398 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
IL1B-205ENST00000477398 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
IL1B-205ENST00000477398 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
IL1B-205ENST00000477398 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
IL1B-205ENST00000477398 IGF1RP08069 1367 aa19.36■□□□□ 0.69
IL1B-205ENST00000477398 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
IL1B-205ENST00000477398 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
IL1B-205ENST00000477398 CUL7Q14999 1698 aa19.33■□□□□ 0.69
IL1B-205ENST00000477398 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
IL1B-205ENST00000477398 CEP170Q5SW79 1584 aa19.27■□□□□ 0.68
IL1B-205ENST00000477398 NUP160Q12769 1436 aa19.25■□□□□ 0.67
IL1B-205ENST00000477398 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
IL1B-205ENST00000477398 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
IL1B-205ENST00000477398 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
IL1B-205ENST00000477398 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
IL1B-205ENST00000477398 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
IL1B-205ENST00000477398 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
IL1B-205ENST00000477398 SHROOM2Q13796 1616 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms