RNA–Protein interactions for RNA: ENST00000477393.1

RNF7-204, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-204ENST00000477393 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
RNF7-204ENST00000477393 ABCC9O60706 1549 aa34.65■■■■□ 3.14
RNF7-204ENST00000477393 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
RNF7-204ENST00000477393 RB1CC1Q8TDY2 1594 aa32.93■■■□□ 2.86
RNF7-204ENST00000477393 DNAJC5BQ9UF47 199 aa32.79■■■□□ 2.84
RNF7-204ENST00000477393 NACADO15069 1562 aa32.68■■■□□ 2.82
RNF7-204ENST00000477393 DCAF8L2P0C7V8 631 aa32.38■■■□□ 2.77
RNF7-204ENST00000477393 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
RNF7-204ENST00000477393 MYO15BQ96JP2 1530 aa32.21■■■□□ 2.75
RNF7-204ENST00000477393 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
RNF7-204ENST00000477393 BICRAQ9NZM4 1560 aa32■■■□□ 2.71
RNF7-204ENST00000477393 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.66
RNF7-204ENST00000477393 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
RNF7-204ENST00000477393 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
RNF7-204ENST00000477393 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
RNF7-204ENST00000477393 CC2D2AQ9P2K1 1620 aa31.32■■■□□ 2.6
RNF7-204ENST00000477393 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
RNF7-204ENST00000477393 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
RNF7-204ENST00000477393 DNAJC5Q9H3Z4 198 aa30.31■■■□□ 2.44
RNF7-204ENST00000477393 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
RNF7-204ENST00000477393 CUX2O14529 1486 aa30.03■■■□□ 2.4
RNF7-204ENST00000477393 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
RNF7-204ENST00000477393 ERCC6Q03468 1493 aa29.94■■■□□ 2.38
RNF7-204ENST00000477393 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
RNF7-204ENST00000477393 SMARCA4P51532 1647 aa29.92■■■□□ 2.38
RNF7-204ENST00000477393 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
RNF7-204ENST00000477393 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
RNF7-204ENST00000477393 NESP48681 1621 aa29.72■■■□□ 2.35
RNF7-204ENST00000477393 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
RNF7-204ENST00000477393 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
RNF7-204ENST00000477393 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
RNF7-204ENST00000477393 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.31
RNF7-204ENST00000477393 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
RNF7-204ENST00000477393 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
RNF7-204ENST00000477393 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
RNF7-204ENST00000477393 CADPSQ9ULU8 1353 aa29.25■■■□□ 2.27
RNF7-204ENST00000477393 WIZO95785 1651 aa29.12■■■□□ 2.25
RNF7-204ENST00000477393 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
RNF7-204ENST00000477393 WDR62O43379 1518 aa29.04■■■□□ 2.24
RNF7-204ENST00000477393 CEP164Q9UPV0 1460 aa28.92■■■□□ 2.22
RNF7-204ENST00000477393 FANCD2Q9BXW9 1451 aa28.88■■■□□ 2.21
RNF7-204ENST00000477393 CFTRP13569 1480 aa28.87■■■□□ 2.21
RNF7-204ENST00000477393 RSF1Q96T23 1441 aaPredicted RBP28.84■■■□□ 2.21
RNF7-204ENST00000477393 TRIM41Q8WV44 630 aa28.78■■■□□ 2.2
RNF7-204ENST00000477393 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
RNF7-204ENST00000477393 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
RNF7-204ENST00000477393 OSCARQ8IYS5 282 aa28.63■■■□□ 2.17
RNF7-204ENST00000477393 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
RNF7-204ENST00000477393 CCDC88BA6NC98 1476 aa28.45■■■□□ 2.14
RNF7-204ENST00000477393 IFT140Q96RY7 1462 aa28.38■■■□□ 2.13
RNF7-204ENST00000477393 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
RNF7-204ENST00000477393 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
RNF7-204ENST00000477393 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
RNF7-204ENST00000477393 RIMBP3CA6NJZ7 1639 aa28.23■■■□□ 2.11
RNF7-204ENST00000477393 RIMBP3BA6NNM3 1639 aa28.23■■■□□ 2.11
RNF7-204ENST00000477393 RIMBP3Q9UFD9 1639 aa28.23■■■□□ 2.11
RNF7-204ENST00000477393 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
RNF7-204ENST00000477393 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
RNF7-204ENST00000477393 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
RNF7-204ENST00000477393 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
RNF7-204ENST00000477393 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.082e-6■■■■□ 24.2
RNF7-204ENST00000477393 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.07
RNF7-204ENST00000477393 CHD1O14646 1710 aa27.98■■■□□ 2.07
RNF7-204ENST00000477393 CYB5RLQ6IPT4 315 aa27.95■■■□□ 2.06
RNF7-204ENST00000477393 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
RNF7-204ENST00000477393 FBLN2P98095 1184 aa27.89■■■□□ 2.06
RNF7-204ENST00000477393 SOGA1O94964 1423 aa27.89■■■□□ 2.06
RNF7-204ENST00000477393 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
RNF7-204ENST00000477393 ARAP1Q96P48 1450 aa27.83■■■□□ 2.05
RNF7-204ENST00000477393 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
RNF7-204ENST00000477393 FGD5Q6ZNL6 1462 aa27.78■■■□□ 2.04
RNF7-204ENST00000477393 SNAPC4Q5SXM2 1469 aa27.75■■■□□ 2.03
RNF7-204ENST00000477393 CUX1P39880 1505 aa27.73■■■□□ 2.03
RNF7-204ENST00000477393 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
RNF7-204ENST00000477393 CLASP1Q7Z460 1538 aa27.69■■■□□ 2.02
RNF7-204ENST00000477393 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
RNF7-204ENST00000477393 CHMP7Q8WUX9 453 aaPredicted RBP27.68■■■□□ 2.02
RNF7-204ENST00000477393 GRIN2BQ13224 1484 aa27.67■■■□□ 2.02
RNF7-204ENST00000477393 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
RNF7-204ENST00000477393 SYNJ2O15056 1496 aa27.61■■■□□ 2.01
RNF7-204ENST00000477393 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
RNF7-204ENST00000477393 PBRM1Q86U86 1689 aa27.5■■□□□ 1.99
RNF7-204ENST00000477393 ABCA10Q8WWZ4 1543 aa27.49■■□□□ 1.99
RNF7-204ENST00000477393 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.98
RNF7-204ENST00000477393 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.96
RNF7-204ENST00000477393 SUPT5HO00267 1087 aaKnown RBP27.31■■□□□ 1.96
RNF7-204ENST00000477393 GRIN2AQ12879 1464 aa27.31■■□□□ 1.96
RNF7-204ENST00000477393 NUP160Q12769 1436 aa27.24■■□□□ 1.95
RNF7-204ENST00000477393 ADAMTS12P58397 1594 aa27.24■■□□□ 1.95
RNF7-204ENST00000477393 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
RNF7-204ENST00000477393 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
RNF7-204ENST00000477393 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
RNF7-204ENST00000477393 CEP170Q5SW79 1584 aa27.2■■□□□ 1.94
RNF7-204ENST00000477393 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
RNF7-204ENST00000477393 SHROOM2Q13796 1616 aa27.15■■□□□ 1.94
RNF7-204ENST00000477393 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.94
RNF7-204ENST00000477393 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
RNF7-204ENST00000477393 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
RNF7-204ENST00000477393 PRG4Q92954 1404 aaPredicted RBP26.98■■□□□ 1.91
RNF7-204ENST00000477393 KIF13AQ9H1H9 1805 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms