RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 NISCHQ9Y2I1 1504 aa38.45■■■■□ 3.75
COMMD6-209ENST00000477377 CCDC180Q9P1Z9 1646 aa34.2■■■■□ 3.07
COMMD6-209ENST00000477377 ABCC9O60706 1549 aa33.77■■■■□ 3
COMMD6-209ENST00000477377 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
COMMD6-209ENST00000477377 NACADO15069 1562 aa32.24■■■□□ 2.75
COMMD6-209ENST00000477377 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
COMMD6-209ENST00000477377 MYO15BQ96JP2 1530 aa32.02■■■□□ 2.72
COMMD6-209ENST00000477377 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
COMMD6-209ENST00000477377 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
COMMD6-209ENST00000477377 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
COMMD6-209ENST00000477377 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
COMMD6-209ENST00000477377 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
COMMD6-209ENST00000477377 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
COMMD6-209ENST00000477377 SCRIBQ14160 1630 aa31.21■■■□□ 2.59
COMMD6-209ENST00000477377 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
COMMD6-209ENST00000477377 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
COMMD6-209ENST00000477377 CC2D2AQ9P2K1 1620 aa30.54■■■□□ 2.48
COMMD6-209ENST00000477377 CECR2Q9BXF3 1484 aa30.36■■■□□ 2.45
COMMD6-209ENST00000477377 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
COMMD6-209ENST00000477377 NCAPD3P42695 1498 aa29.83■■■□□ 2.37
COMMD6-209ENST00000477377 ATAD2BQ9ULI0 1458 aa29.8■■■□□ 2.36
COMMD6-209ENST00000477377 BAZ1AQ9NRL2 1556 aaPredicted RBP29.76■■■□□ 2.35
COMMD6-209ENST00000477377 SMARCA2P51531 1590 aa29.66■■■□□ 2.34
COMMD6-209ENST00000477377 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
COMMD6-209ENST00000477377 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
COMMD6-209ENST00000477377 HMGXB3Q12766 1538 aa29.59■■■□□ 2.33
COMMD6-209ENST00000477377 BAZ1BQ9UIG0 1483 aaKnown RBP29.46■■■□□ 2.31
COMMD6-209ENST00000477377 WIZO95785 1651 aa29.29■■■□□ 2.28
COMMD6-209ENST00000477377 RSF1Q96T23 1441 aaPredicted RBP29.24■■■□□ 2.27
COMMD6-209ENST00000477377 NESP48681 1621 aa29.2■■■□□ 2.26
COMMD6-209ENST00000477377 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
COMMD6-209ENST00000477377 LAMC3Q9Y6N6 1575 aa29■■■□□ 2.23
COMMD6-209ENST00000477377 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
COMMD6-209ENST00000477377 CADPSQ9ULU8 1353 aa28.93■■■□□ 2.22
COMMD6-209ENST00000477377 CUX2O14529 1486 aa28.87■■■□□ 2.21
COMMD6-209ENST00000477377 PDS5BQ9NTI5 1447 aa28.8■■■□□ 2.2
COMMD6-209ENST00000477377 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
COMMD6-209ENST00000477377 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
COMMD6-209ENST00000477377 CFTRP13569 1480 aa28.72■■■□□ 2.19
COMMD6-209ENST00000477377 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
COMMD6-209ENST00000477377 FANCD2Q9BXW9 1451 aa28.56■■■□□ 2.16
COMMD6-209ENST00000477377 MRC2Q9UBG0 1479 aa28.54■■■□□ 2.16
COMMD6-209ENST00000477377 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
COMMD6-209ENST00000477377 WDR62O43379 1518 aa28.49■■■□□ 2.15
COMMD6-209ENST00000477377 DNAJC5Q9H3Z4 198 aa28.36■■■□□ 2.13
COMMD6-209ENST00000477377 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
COMMD6-209ENST00000477377 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
COMMD6-209ENST00000477377 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
COMMD6-209ENST00000477377 TOPBP1Q92547 1522 aa28.1■■■□□ 2.09
COMMD6-209ENST00000477377 ABCC8Q09428 1581 aa28.01■■■□□ 2.07
COMMD6-209ENST00000477377 DNMBPQ6XZF7 1577 aa28■■■□□ 2.07
COMMD6-209ENST00000477377 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
COMMD6-209ENST00000477377 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
COMMD6-209ENST00000477377 POLA1P09884 1462 aaPredicted RBP27.85■■■□□ 2.05
COMMD6-209ENST00000477377 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
COMMD6-209ENST00000477377 CUX1P39880 1505 aa27.82■■■□□ 2.04
COMMD6-209ENST00000477377 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.04
COMMD6-209ENST00000477377 FGD5Q6ZNL6 1462 aa27.73■■■□□ 2.03
COMMD6-209ENST00000477377 AQRO60306 1485 aaKnown RBP eCLIP27.72■■■□□ 2.03
COMMD6-209ENST00000477377 SOGA1O94964 1423 aa27.72■■■□□ 2.03
COMMD6-209ENST00000477377 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
COMMD6-209ENST00000477377 OSCARQ8IYS5 282 aa27.65■■■□□ 2.02
COMMD6-209ENST00000477377 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
COMMD6-209ENST00000477377 WDR97A6NE52 1622 aa27.51■■□□□ 1.99
COMMD6-209ENST00000477377 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
COMMD6-209ENST00000477377 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
COMMD6-209ENST00000477377 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
COMMD6-209ENST00000477377 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
COMMD6-209ENST00000477377 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
COMMD6-209ENST00000477377 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
COMMD6-209ENST00000477377 CHD1O14646 1710 aa27.4■■□□□ 1.98
COMMD6-209ENST00000477377 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
COMMD6-209ENST00000477377 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
COMMD6-209ENST00000477377 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
COMMD6-209ENST00000477377 MAGI1Q96QZ7 1491 aaPredicted RBP27.34■■□□□ 1.97
COMMD6-209ENST00000477377 FBLN2P98095 1184 aa27.33■■□□□ 1.97
COMMD6-209ENST00000477377 PBRM1Q86U86 1689 aa27.29■■□□□ 1.96
COMMD6-209ENST00000477377 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
COMMD6-209ENST00000477377 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
COMMD6-209ENST00000477377 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
COMMD6-209ENST00000477377 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
COMMD6-209ENST00000477377 CHMP7Q8WUX9 453 aaPredicted RBP27.24■■□□□ 1.95
COMMD6-209ENST00000477377 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
COMMD6-209ENST00000477377 ARHGEF11O15085 1522 aa27.21■■□□□ 1.95
COMMD6-209ENST00000477377 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
COMMD6-209ENST00000477377 ADAMTS12P58397 1594 aa27.09■■□□□ 1.93
COMMD6-209ENST00000477377 ERICH3Q5RHP9 1530 aa27.09■■□□□ 1.93
COMMD6-209ENST00000477377 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
COMMD6-209ENST00000477377 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
COMMD6-209ENST00000477377 ARAP1Q96P48 1450 aa27■■□□□ 1.91
COMMD6-209ENST00000477377 NUP160Q12769 1436 aa26.99■■□□□ 1.91
COMMD6-209ENST00000477377 CYB5RLQ6IPT4 315 aa26.98■■□□□ 1.91
COMMD6-209ENST00000477377 CEP170Q5SW79 1584 aa26.97■■□□□ 1.91
COMMD6-209ENST00000477377 IGF1RP08069 1367 aa26.96■■□□□ 1.91
COMMD6-209ENST00000477377 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
COMMD6-209ENST00000477377 ERCC6L2Q5T890 1561 aa26.82■■□□□ 1.88
COMMD6-209ENST00000477377 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
COMMD6-209ENST00000477377 CUL7Q14999 1698 aa26.74■■□□□ 1.87
COMMD6-209ENST00000477377 RUSC2Q8N2Y8 1516 aa26.74■■□□□ 1.87
COMMD6-209ENST00000477377 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms