RNA–Protein interactions for RNA: ENST00000477358.6

PGAP2-217, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 5

Gene PGAP2, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-217ENST00000477358 NISCHQ9Y2I1 1504 aa26■■□□□ 1.75
PGAP2-217ENST00000477358 ABCC9O60706 1549 aa23.26■■□□□ 1.31
PGAP2-217ENST00000477358 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
PGAP2-217ENST00000477358 RB1CC1Q8TDY2 1594 aa22.11■■□□□ 1.13
PGAP2-217ENST00000477358 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
PGAP2-217ENST00000477358 NACADO15069 1562 aa21.98■■□□□ 1.11
PGAP2-217ENST00000477358 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
PGAP2-217ENST00000477358 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.07
PGAP2-217ENST00000477358 MYO15BQ96JP2 1530 aa21.72■■□□□ 1.07
PGAP2-217ENST00000477358 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
PGAP2-217ENST00000477358 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
PGAP2-217ENST00000477358 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
PGAP2-217ENST00000477358 DCAF1Q9Y4B6 1507 aa21.46■■□□□ 1.03
PGAP2-217ENST00000477358 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
PGAP2-217ENST00000477358 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
PGAP2-217ENST00000477358 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
PGAP2-217ENST00000477358 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
PGAP2-217ENST00000477358 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
PGAP2-217ENST00000477358 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
PGAP2-217ENST00000477358 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
PGAP2-217ENST00000477358 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
PGAP2-217ENST00000477358 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
PGAP2-217ENST00000477358 HMGXB3Q12766 1538 aa20.15■□□□□ 0.82
PGAP2-217ENST00000477358 BAZ1AQ9NRL2 1556 aaPredicted RBP20.15■□□□□ 0.82
PGAP2-217ENST00000477358 BAZ1BQ9UIG0 1483 aaKnown RBP20.07■□□□□ 0.8
PGAP2-217ENST00000477358 MROH2BQ7Z745 1585 aa20.06■□□□□ 0.8
PGAP2-217ENST00000477358 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
PGAP2-217ENST00000477358 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
PGAP2-217ENST00000477358 NESP48681 1621 aa20.01■□□□□ 0.79
PGAP2-217ENST00000477358 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
PGAP2-217ENST00000477358 CUX2O14529 1486 aa19.99■□□□□ 0.79
PGAP2-217ENST00000477358 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
PGAP2-217ENST00000477358 WIZO95785 1651 aa19.77■□□□□ 0.76
PGAP2-217ENST00000477358 CADPSQ9ULU8 1353 aa19.75■□□□□ 0.75
PGAP2-217ENST00000477358 PDS5BQ9NTI5 1447 aa19.75■□□□□ 0.75
PGAP2-217ENST00000477358 THOC2Q8NI27 1593 aaKnown RBP19.73■□□□□ 0.75
PGAP2-217ENST00000477358 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
PGAP2-217ENST00000477358 KIF21AQ7Z4S6 1674 aa19.67■□□□□ 0.74
PGAP2-217ENST00000477358 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
PGAP2-217ENST00000477358 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
PGAP2-217ENST00000477358 CFTRP13569 1480 aa19.52■□□□□ 0.71
PGAP2-217ENST00000477358 WDR62O43379 1518 aa19.49■□□□□ 0.71
PGAP2-217ENST00000477358 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
PGAP2-217ENST00000477358 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
PGAP2-217ENST00000477358 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
PGAP2-217ENST00000477358 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
PGAP2-217ENST00000477358 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
PGAP2-217ENST00000477358 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
PGAP2-217ENST00000477358 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
PGAP2-217ENST00000477358 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
PGAP2-217ENST00000477358 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
PGAP2-217ENST00000477358 ZNF608Q9ULD9 1512 aaPredicted RBP19.1■□□□□ 0.65
PGAP2-217ENST00000477358 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
PGAP2-217ENST00000477358 DNMBPQ6XZF7 1577 aa19.03■□□□□ 0.64
PGAP2-217ENST00000477358 AQRO60306 1485 aaKnown RBP eCLIP18.96■□□□□ 0.63
PGAP2-217ENST00000477358 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
PGAP2-217ENST00000477358 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
PGAP2-217ENST00000477358 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
PGAP2-217ENST00000477358 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
PGAP2-217ENST00000477358 SOGA1O94964 1423 aa18.88■□□□□ 0.61
PGAP2-217ENST00000477358 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
PGAP2-217ENST00000477358 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
PGAP2-217ENST00000477358 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
PGAP2-217ENST00000477358 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
PGAP2-217ENST00000477358 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
PGAP2-217ENST00000477358 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
PGAP2-217ENST00000477358 CUX1P39880 1505 aa18.82■□□□□ 0.6
PGAP2-217ENST00000477358 FBLN2P98095 1184 aa18.82■□□□□ 0.6
PGAP2-217ENST00000477358 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
PGAP2-217ENST00000477358 CHD1O14646 1710 aa18.75■□□□□ 0.59
PGAP2-217ENST00000477358 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
PGAP2-217ENST00000477358 CYB5RLQ6IPT4 315 aa18.71■□□□□ 0.59
PGAP2-217ENST00000477358 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
PGAP2-217ENST00000477358 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
PGAP2-217ENST00000477358 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
PGAP2-217ENST00000477358 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
PGAP2-217ENST00000477358 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
PGAP2-217ENST00000477358 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
PGAP2-217ENST00000477358 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
PGAP2-217ENST00000477358 SYNJ2O15056 1496 aa18.61■□□□□ 0.57
PGAP2-217ENST00000477358 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
PGAP2-217ENST00000477358 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.569e-6■■■■■ 50.1
PGAP2-217ENST00000477358 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
PGAP2-217ENST00000477358 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
PGAP2-217ENST00000477358 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
PGAP2-217ENST00000477358 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
PGAP2-217ENST00000477358 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
PGAP2-217ENST00000477358 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
PGAP2-217ENST00000477358 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
PGAP2-217ENST00000477358 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
PGAP2-217ENST00000477358 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
PGAP2-217ENST00000477358 NUP160Q12769 1436 aa18.38■□□□□ 0.53
PGAP2-217ENST00000477358 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
PGAP2-217ENST00000477358 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
PGAP2-217ENST00000477358 ERCC6L2Q5T890 1561 aa18.34■□□□□ 0.53
PGAP2-217ENST00000477358 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
PGAP2-217ENST00000477358 JPH4Q96JJ6 628 aa18.24■□□□□ 0.51
PGAP2-217ENST00000477358 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
PGAP2-217ENST00000477358 IGF1RP08069 1367 aa18.22■□□□□ 0.51
PGAP2-217ENST00000477358 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms