RNA–Protein interactions for RNA: ENST00000477226.5

DES-202, Transcript of desmin, humanhuman

TSL 4

Gene DES, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DES-202ENST00000477226 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
DES-202ENST00000477226 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
DES-202ENST00000477226 ABCC9O60706 1549 aa19.72■□□□□ 0.75
DES-202ENST00000477226 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
DES-202ENST00000477226 NACADO15069 1562 aa18.8■□□□□ 0.6
DES-202ENST00000477226 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
DES-202ENST00000477226 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
DES-202ENST00000477226 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
DES-202ENST00000477226 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
DES-202ENST00000477226 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
DES-202ENST00000477226 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
DES-202ENST00000477226 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
DES-202ENST00000477226 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
DES-202ENST00000477226 SHROOM4Q9ULL8 1493 aa18.21■□□□□ 0.51
DES-202ENST00000477226 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
DES-202ENST00000477226 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
DES-202ENST00000477226 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
DES-202ENST00000477226 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
DES-202ENST00000477226 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
DES-202ENST00000477226 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
DES-202ENST00000477226 HMGXB3Q12766 1538 aa17.21■□□□□ 0.34
DES-202ENST00000477226 SMARCA4P51532 1647 aa17.19■□□□□ 0.34
DES-202ENST00000477226 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
DES-202ENST00000477226 CUX2O14529 1486 aa17.17■□□□□ 0.34
DES-202ENST00000477226 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
DES-202ENST00000477226 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
DES-202ENST00000477226 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
DES-202ENST00000477226 PEG3Q9GZU2 1588 aa17.08■□□□□ 0.32
DES-202ENST00000477226 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
DES-202ENST00000477226 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
DES-202ENST00000477226 NESP48681 1621 aa16.9■□□□□ 0.3
DES-202ENST00000477226 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
DES-202ENST00000477226 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
DES-202ENST00000477226 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
DES-202ENST00000477226 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
DES-202ENST00000477226 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
DES-202ENST00000477226 WIZO95785 1651 aa16.71■□□□□ 0.27
DES-202ENST00000477226 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
DES-202ENST00000477226 WDR62O43379 1518 aa16.62■□□□□ 0.25
DES-202ENST00000477226 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
DES-202ENST00000477226 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
DES-202ENST00000477226 CFTRP13569 1480 aa16.55■□□□□ 0.24
DES-202ENST00000477226 RSF1Q96T23 1441 aaPredicted RBP16.55■□□□□ 0.24
DES-202ENST00000477226 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
DES-202ENST00000477226 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
DES-202ENST00000477226 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
DES-202ENST00000477226 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
DES-202ENST00000477226 ABCC8Q09428 1581 aa16.34■□□□□ 0.21
DES-202ENST00000477226 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
DES-202ENST00000477226 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
DES-202ENST00000477226 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
DES-202ENST00000477226 TOPBP1Q92547 1522 aa16.22■□□□□ 0.19
DES-202ENST00000477226 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
DES-202ENST00000477226 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
DES-202ENST00000477226 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
DES-202ENST00000477226 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
DES-202ENST00000477226 RIMBP3CA6NJZ7 1639 aa16.08■□□□□ 0.17
DES-202ENST00000477226 RIMBP3BA6NNM3 1639 aa16.08■□□□□ 0.17
DES-202ENST00000477226 RIMBP3Q9UFD9 1639 aa16.08■□□□□ 0.17
DES-202ENST00000477226 WDR97A6NE52 1622 aa16.08■□□□□ 0.16
DES-202ENST00000477226 CHD1O14646 1710 aa16.04■□□□□ 0.16
DES-202ENST00000477226 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
DES-202ENST00000477226 POLA1P09884 1462 aaPredicted RBP16.03■□□□□ 0.16
DES-202ENST00000477226 AQRO60306 1485 aaKnown RBP eCLIP16■□□□□ 0.15
DES-202ENST00000477226 SOGA1O94964 1423 aa15.98■□□□□ 0.15
DES-202ENST00000477226 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
DES-202ENST00000477226 FBLN2P98095 1184 aa15.93■□□□□ 0.14
DES-202ENST00000477226 MAGI1Q96QZ7 1491 aaPredicted RBP15.92■□□□□ 0.14
DES-202ENST00000477226 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
DES-202ENST00000477226 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
DES-202ENST00000477226 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
DES-202ENST00000477226 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
DES-202ENST00000477226 CUX1P39880 1505 aa15.89■□□□□ 0.13
DES-202ENST00000477226 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
DES-202ENST00000477226 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
DES-202ENST00000477226 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
DES-202ENST00000477226 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
DES-202ENST00000477226 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
DES-202ENST00000477226 ARAP1Q96P48 1450 aa15.83■□□□□ 0.12
DES-202ENST00000477226 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
DES-202ENST00000477226 GAPVD1Q14C86 1478 aa15.81■□□□□ 0.12
DES-202ENST00000477226 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
DES-202ENST00000477226 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
DES-202ENST00000477226 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
DES-202ENST00000477226 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
DES-202ENST00000477226 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
DES-202ENST00000477226 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
DES-202ENST00000477226 TOP2BQ02880 1626 aa15.71■□□□□ 0.11
DES-202ENST00000477226 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
DES-202ENST00000477226 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
DES-202ENST00000477226 ADAMTS12P58397 1594 aa15.63■□□□□ 0.09
DES-202ENST00000477226 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
DES-202ENST00000477226 NUP160Q12769 1436 aa15.6■□□□□ 0.09
DES-202ENST00000477226 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
DES-202ENST00000477226 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
DES-202ENST00000477226 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
DES-202ENST00000477226 PRG4Q92954 1404 aaPredicted RBP15.44■□□□□ 0.06
DES-202ENST00000477226 JPH4Q96JJ6 628 aa15.44■□□□□ 0.06
DES-202ENST00000477226 CUL7Q14999 1698 aa15.44■□□□□ 0.06
DES-202ENST00000477226 RUSC2Q8N2Y8 1516 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms