RNA–Protein interactions for RNA: ENST00000477207.2

RNFT1-203, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 1 (best)

Gene RNFT1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-203ENST00000477207 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
RNFT1-203ENST00000477207 CCDC180Q9P1Z9 1646 aa33.58■■■□□ 2.97
RNFT1-203ENST00000477207 ABCC9O60706 1549 aa33.48■■■□□ 2.95
RNFT1-203ENST00000477207 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
RNFT1-203ENST00000477207 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
RNFT1-203ENST00000477207 NACADO15069 1562 aa31.67■■■□□ 2.66
RNFT1-203ENST00000477207 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
RNFT1-203ENST00000477207 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
RNFT1-203ENST00000477207 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
RNFT1-203ENST00000477207 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
RNFT1-203ENST00000477207 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
RNFT1-203ENST00000477207 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
RNFT1-203ENST00000477207 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
RNFT1-203ENST00000477207 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
RNFT1-203ENST00000477207 SHROOM4Q9ULL8 1493 aa30.43■■■□□ 2.46
RNFT1-203ENST00000477207 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
RNFT1-203ENST00000477207 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
RNFT1-203ENST00000477207 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
RNFT1-203ENST00000477207 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
RNFT1-203ENST00000477207 NCAPD3P42695 1498 aa29.25■■■□□ 2.27
RNFT1-203ENST00000477207 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
RNFT1-203ENST00000477207 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
RNFT1-203ENST00000477207 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
RNFT1-203ENST00000477207 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
RNFT1-203ENST00000477207 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
RNFT1-203ENST00000477207 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
RNFT1-203ENST00000477207 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
RNFT1-203ENST00000477207 NESP48681 1621 aa28.85■■■□□ 2.21
RNFT1-203ENST00000477207 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
RNFT1-203ENST00000477207 WIZO95785 1651 aa28.7■■■□□ 2.19
RNFT1-203ENST00000477207 CUX2O14529 1486 aa28.62■■■□□ 2.17
RNFT1-203ENST00000477207 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
RNFT1-203ENST00000477207 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
RNFT1-203ENST00000477207 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.15
RNFT1-203ENST00000477207 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.15
RNFT1-203ENST00000477207 CADPSQ9ULU8 1353 aa28.38■■■□□ 2.13
RNFT1-203ENST00000477207 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
RNFT1-203ENST00000477207 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
RNFT1-203ENST00000477207 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
RNFT1-203ENST00000477207 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
RNFT1-203ENST00000477207 CFTRP13569 1480 aa28.12■■■□□ 2.09
RNFT1-203ENST00000477207 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
RNFT1-203ENST00000477207 CEP164Q9UPV0 1460 aa28.1■■■□□ 2.09
RNFT1-203ENST00000477207 WDR62O43379 1518 aa28.08■■■□□ 2.09
RNFT1-203ENST00000477207 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
RNFT1-203ENST00000477207 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
RNFT1-203ENST00000477207 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
RNFT1-203ENST00000477207 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
RNFT1-203ENST00000477207 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
RNFT1-203ENST00000477207 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
RNFT1-203ENST00000477207 IFT140Q96RY7 1462 aa27.51■■□□□ 1.99
RNFT1-203ENST00000477207 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
RNFT1-203ENST00000477207 ABCC8Q09428 1581 aa27.44■■□□□ 1.98
RNFT1-203ENST00000477207 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
RNFT1-203ENST00000477207 OSCARQ8IYS5 282 aa27.36■■□□□ 1.97
RNFT1-203ENST00000477207 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
RNFT1-203ENST00000477207 TARBP1Q13395 1621 aaKnown RBP27.34■■□□□ 1.97
RNFT1-203ENST00000477207 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
RNFT1-203ENST00000477207 AQRO60306 1485 aaKnown RBP eCLIP27.3■■□□□ 1.96
RNFT1-203ENST00000477207 RAD54L2Q9Y4B4 1467 aa27.3■■□□□ 1.96
RNFT1-203ENST00000477207 CUX1P39880 1505 aa27.26■■□□□ 1.96
RNFT1-203ENST00000477207 FGD5Q6ZNL6 1462 aa27.24■■□□□ 1.95
RNFT1-203ENST00000477207 SOGA1O94964 1423 aa27.2■■□□□ 1.94
RNFT1-203ENST00000477207 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
RNFT1-203ENST00000477207 CHD1O14646 1710 aa27.13■■□□□ 1.93
RNFT1-203ENST00000477207 FBLN2P98095 1184 aa27.07■■□□□ 1.92
RNFT1-203ENST00000477207 RIMBP3CA6NJZ7 1639 aa27.06■■□□□ 1.92
RNFT1-203ENST00000477207 RIMBP3BA6NNM3 1639 aa27.06■■□□□ 1.92
RNFT1-203ENST00000477207 RIMBP3Q9UFD9 1639 aa27.06■■□□□ 1.92
RNFT1-203ENST00000477207 SNAPC4Q5SXM2 1469 aa27.02■■□□□ 1.92
RNFT1-203ENST00000477207 WDR97A6NE52 1622 aa27.01■■□□□ 1.92
RNFT1-203ENST00000477207 ARHGEF11O15085 1522 aa26.99■■□□□ 1.91
RNFT1-203ENST00000477207 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
RNFT1-203ENST00000477207 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
RNFT1-203ENST00000477207 ABCA10Q8WWZ4 1543 aa26.88■■□□□ 1.89
RNFT1-203ENST00000477207 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
RNFT1-203ENST00000477207 GAPVD1Q14C86 1478 aa26.87■■□□□ 1.89
RNFT1-203ENST00000477207 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
RNFT1-203ENST00000477207 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
RNFT1-203ENST00000477207 WRNQ14191 1432 aaPredicted RBP eCLIP26.85■■□□□ 1.89
RNFT1-203ENST00000477207 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
RNFT1-203ENST00000477207 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
RNFT1-203ENST00000477207 TOP2BQ02880 1626 aa26.83■■□□□ 1.88
RNFT1-203ENST00000477207 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
RNFT1-203ENST00000477207 CLASP1Q7Z460 1538 aa26.79■■□□□ 1.88
RNFT1-203ENST00000477207 CYB5RLQ6IPT4 315 aa26.78■■□□□ 1.88
RNFT1-203ENST00000477207 ARAP1Q96P48 1450 aa26.77■■□□□ 1.88
RNFT1-203ENST00000477207 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
RNFT1-203ENST00000477207 GRIN2AQ12879 1464 aa26.6■■□□□ 1.85
RNFT1-203ENST00000477207 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
RNFT1-203ENST00000477207 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
RNFT1-203ENST00000477207 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
RNFT1-203ENST00000477207 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
RNFT1-203ENST00000477207 NUP160Q12769 1436 aa26.48■■□□□ 1.83
RNFT1-203ENST00000477207 TRHP20396 242 aaPredicted RBP26.4■■□□□ 1.82
RNFT1-203ENST00000477207 SHROOM2Q13796 1616 aa26.35■■□□□ 1.81
RNFT1-203ENST00000477207 KIF27Q86VH2 1401 aa26.3■■□□□ 1.8
RNFT1-203ENST00000477207 IGF1RP08069 1367 aa26.28■■□□□ 1.8
RNFT1-203ENST00000477207 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
RNFT1-203ENST00000477207 PRG4Q92954 1404 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms