RNA–Protein interactions for RNA: ENST00000477202.1

TMEM18-207, Transcript of transmembrane protein 18, humanhuman

TSL 2

Gene TMEM18, Length 1,767 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM18-207ENST00000477202 NISCHQ9Y2I1 1504 aa49.44■■■■■ 5.5
TMEM18-207ENST00000477202 CCDC180Q9P1Z9 1646 aa43.22■■■■■ 4.51
TMEM18-207ENST00000477202 ZCCHC6Q5VYS8 1495 aaKnown RBP41.46■■■■■ 4.23
TMEM18-207ENST00000477202 DCAF1Q9Y4B6 1507 aa41.02■■■■■ 4.16
TMEM18-207ENST00000477202 ABCC9O60706 1549 aa40.94■■■■■ 4.14
TMEM18-207ENST00000477202 DCAF8L2P0C7V8 631 aa40.81■■■■■ 4.12
TMEM18-207ENST00000477202 MYO15BQ96JP2 1530 aa40.69■■■■■ 4.1
TMEM18-207ENST00000477202 NACADO15069 1562 aa40.39■■■■■ 4.06
TMEM18-207ENST00000477202 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
TMEM18-207ENST00000477202 SHROOM4Q9ULL8 1493 aa39.91■■■■□ 3.98
TMEM18-207ENST00000477202 SCRIBQ14160 1630 aa39.52■■■■□ 3.92
TMEM18-207ENST00000477202 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
TMEM18-207ENST00000477202 BICRAQ9NZM4 1560 aa38.72■■■■□ 3.79
TMEM18-207ENST00000477202 PABPN1Q86U42 306 aaKnown RBP eCLIP38.57■■■■□ 3.77
TMEM18-207ENST00000477202 SUPT5HO00267 1087 aaKnown RBP38.4■■■■□ 3.74
TMEM18-207ENST00000477202 CECR2Q9BXF3 1484 aa38.31■■■■□ 3.72
TMEM18-207ENST00000477202 RSF1Q96T23 1441 aaPredicted RBP38.24■■■■□ 3.71
TMEM18-207ENST00000477202 BAZ1AQ9NRL2 1556 aaPredicted RBP38.22■■■■□ 3.71
TMEM18-207ENST00000477202 MROH2BQ7Z745 1585 aa38.08■■■■□ 3.69
TMEM18-207ENST00000477202 SMARCA4P51532 1647 aa37.98■■■■□ 3.67
TMEM18-207ENST00000477202 WIZO95785 1651 aa37.68■■■■□ 3.62
TMEM18-207ENST00000477202 PEG3Q9GZU2 1588 aa37.66■■■■□ 3.62
TMEM18-207ENST00000477202 EIF4G1Q04637 1599 aaKnown RBP37.62■■■■□ 3.61
TMEM18-207ENST00000477202 SMARCA2P51531 1590 aa37.52■■■■□ 3.6
TMEM18-207ENST00000477202 ATAD2BQ9ULI0 1458 aa37.49■■■■□ 3.59
TMEM18-207ENST00000477202 TOP2AP11388 1531 aaKnown RBP37.43■■■■□ 3.58
TMEM18-207ENST00000477202 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
TMEM18-207ENST00000477202 BAZ1BQ9UIG0 1483 aaKnown RBP37.25■■■■□ 3.55
TMEM18-207ENST00000477202 HMGXB3Q12766 1538 aa37.17■■■■□ 3.54
TMEM18-207ENST00000477202 CC2D2AQ9P2K1 1620 aa37.08■■■■□ 3.53
TMEM18-207ENST00000477202 CCDC88BA6NC98 1476 aa37.04■■■■□ 3.52
TMEM18-207ENST00000477202 CHIC1Q5VXU3 224 aa36.72■■■■□ 3.47
TMEM18-207ENST00000477202 CFTRP13569 1480 aa36.37■■■■□ 3.41
TMEM18-207ENST00000477202 DNAJC5BQ9UF47 199 aa36.32■■■■□ 3.41
TMEM18-207ENST00000477202 CADPSQ9ULU8 1353 aa36.31■■■■□ 3.4
TMEM18-207ENST00000477202 TRIM41Q8WV44 630 aa36.27■■■■□ 3.4
TMEM18-207ENST00000477202 WRNQ14191 1432 aaPredicted RBP eCLIP36.03■■■■□ 3.36
TMEM18-207ENST00000477202 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
TMEM18-207ENST00000477202 LAMC3Q9Y6N6 1575 aa36.02■■■■□ 3.36
TMEM18-207ENST00000477202 PRDM2Q13029 1718 aa36■■■■□ 3.35
TMEM18-207ENST00000477202 NESP48681 1621 aa35.83■■■■□ 3.33
TMEM18-207ENST00000477202 FANCD2Q9BXW9 1451 aa35.82■■■■□ 3.32
TMEM18-207ENST00000477202 PDS5BQ9NTI5 1447 aa35.82■■■■□ 3.32
TMEM18-207ENST00000477202 SYNJ1O43426 1573 aa35.73■■■■□ 3.31
TMEM18-207ENST00000477202 TOP2BQ02880 1626 aa35.73■■■■□ 3.31
TMEM18-207ENST00000477202 BIVM-ERCC5R4GMW8 1640 aa35.65■■■■□ 3.3
TMEM18-207ENST00000477202 CEP164Q9UPV0 1460 aa35.63■■■■□ 3.29
TMEM18-207ENST00000477202 CUX1P39880 1505 aa35.62■■■■□ 3.29
TMEM18-207ENST00000477202 EEA1Q15075 1411 aa35.53■■■■□ 3.28
TMEM18-207ENST00000477202 DNMBPQ6XZF7 1577 aa35.45■■■■□ 3.27
TMEM18-207ENST00000477202 SOGA1O94964 1423 aa35.39■■■■□ 3.26
TMEM18-207ENST00000477202 TOPBP1Q92547 1522 aa35.39■■■■□ 3.26
TMEM18-207ENST00000477202 FAM9AQ8IZU1 332 aaPredicted RBP35.38■■■■□ 3.25
TMEM18-207ENST00000477202 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
TMEM18-207ENST00000477202 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.25
TMEM18-207ENST00000477202 FGD5Q6ZNL6 1462 aa35.3■■■■□ 3.24
TMEM18-207ENST00000477202 CSRNP3Q8WYN3 585 aa35.28■■■■□ 3.24
TMEM18-207ENST00000477202 MRC2Q9UBG0 1479 aa35.27■■■■□ 3.24
TMEM18-207ENST00000477202 ERCC6Q03468 1493 aa35.22■■■■□ 3.23
TMEM18-207ENST00000477202 RUSC2Q8N2Y8 1516 aa35.2■■■■□ 3.23
TMEM18-207ENST00000477202 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
TMEM18-207ENST00000477202 POLA1P09884 1462 aaPredicted RBP35.19■■■■□ 3.22
TMEM18-207ENST00000477202 LOC105371045A0A1W2PR82 267 aa35.19■■■■□ 3.22
TMEM18-207ENST00000477202 ABCA10Q8WWZ4 1543 aa35.08■■■■□ 3.21
TMEM18-207ENST00000477202 WDR62O43379 1518 aa35.08■■■■□ 3.21
TMEM18-207ENST00000477202 CUX2O14529 1486 aa35.04■■■■□ 3.2
TMEM18-207ENST00000477202 RAD54L2Q9Y4B4 1467 aa35■■■■□ 3.19
TMEM18-207ENST00000477202 THOC2Q8NI27 1593 aaKnown RBP34.92■■■■□ 3.18
TMEM18-207ENST00000477202 KIF21BO75037 1637 aa34.9■■■■□ 3.18
TMEM18-207ENST00000477202 IGF1RP08069 1367 aa34.89■■■■□ 3.18
TMEM18-207ENST00000477202 GOLGA3Q08378 1498 aa34.88■■■■□ 3.17
TMEM18-207ENST00000477202 PRXQ9BXM0 1461 aa34.86■■■■□ 3.17
TMEM18-207ENST00000477202 IFT140Q96RY7 1462 aa34.86■■■■□ 3.17
TMEM18-207ENST00000477202 TARBP1Q13395 1621 aaKnown RBP34.84■■■■□ 3.17
TMEM18-207ENST00000477202 WDR97A6NE52 1622 aa34.82■■■■□ 3.17
TMEM18-207ENST00000477202 TNIKQ9UKE5 1360 aa34.79■■■■□ 3.16
TMEM18-207ENST00000477202 ERICH3Q5RHP9 1530 aa34.78■■■■□ 3.16
TMEM18-207ENST00000477202 EHMT2Q96KQ7 1210 aa34.74■■■■□ 3.15
TMEM18-207ENST00000477202 TDRD9Q8NDG6 1382 aaKnown RBP34.74■■■■□ 3.15
TMEM18-207ENST00000477202 UBTFP17480 764 aaKnown RBP34.74■■■■□ 3.15
TMEM18-207ENST00000477202 GAPVD1Q14C86 1478 aa34.73■■■■□ 3.15
TMEM18-207ENST00000477202 ABCA5Q8WWZ7 1642 aa34.71■■■■□ 3.15
TMEM18-207ENST00000477202 CARMIL1Q5VZK9 1371 aa34.71■■■■□ 3.15
TMEM18-207ENST00000477202 RAPGEF2Q9Y4G8 1499 aa34.7■■■■□ 3.14
TMEM18-207ENST00000477202 CUL7Q14999 1698 aa34.58■■■■□ 3.13
TMEM18-207ENST00000477202 AQRO60306 1485 aaKnown RBP eCLIP34.55■■■■□ 3.12
TMEM18-207ENST00000477202 GRIN2BQ13224 1484 aa34.53■■■■□ 3.12
TMEM18-207ENST00000477202 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
TMEM18-207ENST00000477202 CEP162Q5TB80 1403 aa34.47■■■■□ 3.11
TMEM18-207ENST00000477202 FHAD1B1AJZ9 1412 aa34.41■■■■□ 3.1
TMEM18-207ENST00000477202 PBRM1Q86U86 1689 aa34.39■■■■□ 3.1
TMEM18-207ENST00000477202 EIF4G3O43432 1585 aaKnown RBP34.37■■■■□ 3.09
TMEM18-207ENST00000477202 CLIP1P30622 1438 aa34.3■■■■□ 3.08
TMEM18-207ENST00000477202 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
TMEM18-207ENST00000477202 ADAMTS12P58397 1594 aa34.26■■■■□ 3.08
TMEM18-207ENST00000477202 SNAPC4Q5SXM2 1469 aa34.22■■■■□ 3.07
TMEM18-207ENST00000477202 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
TMEM18-207ENST00000477202 CHMP7Q8WUX9 453 aaPredicted RBP34.09■■■■□ 3.05
TMEM18-207ENST00000477202 GRIN2AQ12879 1464 aa34.06■■■■□ 3.04
TMEM18-207ENST00000477202 CTTNBP2Q8WZ74 1663 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms