RNA–Protein interactions for RNA: ENST00000477188.1

MMACHC-202, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

TSL 3

Gene MMACHC, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-202ENST00000477188 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
MMACHC-202ENST00000477188 ABCC9O60706 1549 aa27.76■■■□□ 2.03
MMACHC-202ENST00000477188 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
MMACHC-202ENST00000477188 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
MMACHC-202ENST00000477188 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.78
MMACHC-202ENST00000477188 NACADO15069 1562 aa25.9■■□□□ 1.74
MMACHC-202ENST00000477188 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
MMACHC-202ENST00000477188 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
MMACHC-202ENST00000477188 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
MMACHC-202ENST00000477188 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
MMACHC-202ENST00000477188 MYO15BQ96JP2 1530 aa25.36■■□□□ 1.65
MMACHC-202ENST00000477188 CC2D2AQ9P2K1 1620 aa25.05■■□□□ 1.6
MMACHC-202ENST00000477188 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
MMACHC-202ENST00000477188 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
MMACHC-202ENST00000477188 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
MMACHC-202ENST00000477188 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
MMACHC-202ENST00000477188 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
MMACHC-202ENST00000477188 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
MMACHC-202ENST00000477188 DNAJC5Q9H3Z4 198 aa24.45■■□□□ 1.5
MMACHC-202ENST00000477188 CUX2O14529 1486 aa24.04■■□□□ 1.44
MMACHC-202ENST00000477188 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
MMACHC-202ENST00000477188 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
MMACHC-202ENST00000477188 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
MMACHC-202ENST00000477188 NESP48681 1621 aa23.74■■□□□ 1.39
MMACHC-202ENST00000477188 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
MMACHC-202ENST00000477188 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
MMACHC-202ENST00000477188 SMARCA2P51531 1590 aa23.7■■□□□ 1.38
MMACHC-202ENST00000477188 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
MMACHC-202ENST00000477188 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
MMACHC-202ENST00000477188 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
MMACHC-202ENST00000477188 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
MMACHC-202ENST00000477188 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
MMACHC-202ENST00000477188 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
MMACHC-202ENST00000477188 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
MMACHC-202ENST00000477188 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
MMACHC-202ENST00000477188 TRIM41Q8WV44 630 aa23.28■■□□□ 1.32
MMACHC-202ENST00000477188 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
MMACHC-202ENST00000477188 WDR62O43379 1518 aa23.14■■□□□ 1.3
MMACHC-202ENST00000477188 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
MMACHC-202ENST00000477188 WIZO95785 1651 aa23.05■■□□□ 1.28
MMACHC-202ENST00000477188 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
MMACHC-202ENST00000477188 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
MMACHC-202ENST00000477188 CFTRP13569 1480 aa22.81■■□□□ 1.24
MMACHC-202ENST00000477188 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
MMACHC-202ENST00000477188 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
MMACHC-202ENST00000477188 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
MMACHC-202ENST00000477188 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
MMACHC-202ENST00000477188 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
MMACHC-202ENST00000477188 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
MMACHC-202ENST00000477188 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
MMACHC-202ENST00000477188 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
MMACHC-202ENST00000477188 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
MMACHC-202ENST00000477188 ARHGEF11O15085 1522 aa22.55■■□□□ 1.2
MMACHC-202ENST00000477188 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
MMACHC-202ENST00000477188 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
MMACHC-202ENST00000477188 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
MMACHC-202ENST00000477188 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
MMACHC-202ENST00000477188 CHD1O14646 1710 aa22.41■■□□□ 1.18
MMACHC-202ENST00000477188 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
MMACHC-202ENST00000477188 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
MMACHC-202ENST00000477188 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
MMACHC-202ENST00000477188 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
MMACHC-202ENST00000477188 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.16
MMACHC-202ENST00000477188 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
MMACHC-202ENST00000477188 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
MMACHC-202ENST00000477188 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
MMACHC-202ENST00000477188 FBLN2P98095 1184 aa22.2■■□□□ 1.14
MMACHC-202ENST00000477188 RAD54L2Q9Y4B4 1467 aa22.14■■□□□ 1.13
MMACHC-202ENST00000477188 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
MMACHC-202ENST00000477188 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
MMACHC-202ENST00000477188 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
MMACHC-202ENST00000477188 SOGA1O94964 1423 aa22.04■■□□□ 1.12
MMACHC-202ENST00000477188 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.12
MMACHC-202ENST00000477188 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
MMACHC-202ENST00000477188 WDR97A6NE52 1622 aa22■■□□□ 1.11
MMACHC-202ENST00000477188 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
MMACHC-202ENST00000477188 CUX1P39880 1505 aa21.95■■□□□ 1.1
MMACHC-202ENST00000477188 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
MMACHC-202ENST00000477188 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
MMACHC-202ENST00000477188 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
MMACHC-202ENST00000477188 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
MMACHC-202ENST00000477188 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
MMACHC-202ENST00000477188 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
MMACHC-202ENST00000477188 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
MMACHC-202ENST00000477188 ERCC6L2Q5T890 1561 aa21.76■■□□□ 1.07
MMACHC-202ENST00000477188 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
MMACHC-202ENST00000477188 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
MMACHC-202ENST00000477188 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
MMACHC-202ENST00000477188 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
MMACHC-202ENST00000477188 NUP160Q12769 1436 aa21.59■■□□□ 1.05
MMACHC-202ENST00000477188 SHROOM2Q13796 1616 aa21.58■■□□□ 1.05
MMACHC-202ENST00000477188 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
MMACHC-202ENST00000477188 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
MMACHC-202ENST00000477188 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
MMACHC-202ENST00000477188 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
MMACHC-202ENST00000477188 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
MMACHC-202ENST00000477188 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
MMACHC-202ENST00000477188 PRG4Q92954 1404 aaPredicted RBP21.41■■□□□ 1.02
MMACHC-202ENST00000477188 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
MMACHC-202ENST00000477188 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms