RNA–Protein interactions for RNA: ENST00000477160.1

GFRA4-203, Transcript of GDNF family receptor alpha 4, humanhuman

TSL 1 (best)

Gene GFRA4, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-203ENST00000477160 NISCHQ9Y2I1 1504 aa60.82■■■■■ 7.33
GFRA4-203ENST00000477160 CCDC180Q9P1Z9 1646 aa54.32■■■■■ 6.29
GFRA4-203ENST00000477160 ABCC9O60706 1549 aa53.78■■■■■ 6.2
GFRA4-203ENST00000477160 RB1CC1Q8TDY2 1594 aa51.47■■■■■ 5.83
GFRA4-203ENST00000477160 NACADO15069 1562 aa51.28■■■■■ 5.8
GFRA4-203ENST00000477160 DCAF8L2P0C7V8 631 aa51.08■■■■■ 5.77
GFRA4-203ENST00000477160 MYO15BQ96JP2 1530 aa50.8■■■■■ 5.72
GFRA4-203ENST00000477160 ZCCHC6Q5VYS8 1495 aaKnown RBP50.52■■■■■ 5.68
GFRA4-203ENST00000477160 DCAF1Q9Y4B6 1507 aa50.32■■■■■ 5.65
GFRA4-203ENST00000477160 UNC13AQ9UPW8 1703 aa50.16■■■■■ 5.62
GFRA4-203ENST00000477160 PABPN1Q86U42 306 aaKnown RBP eCLIP50.16■■■■■ 5.62
GFRA4-203ENST00000477160 DNAJC5BQ9UF47 199 aa49.96■■■■■ 5.59
GFRA4-203ENST00000477160 BICRAQ9NZM4 1560 aa49.9■■■■■ 5.58
GFRA4-203ENST00000477160 SCRIBQ14160 1630 aa49.49■■■■■ 5.51
GFRA4-203ENST00000477160 SHROOM4Q9ULL8 1493 aa49.42■■■■■ 5.5
GFRA4-203ENST00000477160 EIF4G1Q04637 1599 aaKnown RBP48.65■■■■■ 5.38
GFRA4-203ENST00000477160 CC2D2AQ9P2K1 1620 aa48.6■■■■■ 5.37
GFRA4-203ENST00000477160 CECR2Q9BXF3 1484 aa48.42■■■■■ 5.34
GFRA4-203ENST00000477160 NCAPD3P42695 1498 aa47.34■■■■■ 5.17
GFRA4-203ENST00000477160 SMARCA4P51532 1647 aa47.3■■■■■ 5.16
GFRA4-203ENST00000477160 ATAD2BQ9ULI0 1458 aa47.25■■■■■ 5.15
GFRA4-203ENST00000477160 BAZ1AQ9NRL2 1556 aaPredicted RBP47.2■■■■■ 5.15
GFRA4-203ENST00000477160 SMARCA2P51531 1590 aa47.16■■■■■ 5.14
GFRA4-203ENST00000477160 HMGXB3Q12766 1538 aa47.02■■■■■ 5.12
GFRA4-203ENST00000477160 PEG3Q9GZU2 1588 aa46.88■■■■■ 5.1
GFRA4-203ENST00000477160 MROH2BQ7Z745 1585 aa46.83■■■■■ 5.09
GFRA4-203ENST00000477160 BAZ1BQ9UIG0 1483 aaKnown RBP46.82■■■■■ 5.09
GFRA4-203ENST00000477160 ERCC6Q03468 1493 aa46.44■■■■■ 5.02
GFRA4-203ENST00000477160 NESP48681 1621 aa46.33■■■■■ 5.01
GFRA4-203ENST00000477160 WIZO95785 1651 aa46.26■■■■■ 5
GFRA4-203ENST00000477160 CUX2O14529 1486 aa46.2■■■■■ 4.99
GFRA4-203ENST00000477160 LAMC3Q9Y6N6 1575 aa46.16■■■■■ 4.98
GFRA4-203ENST00000477160 RSF1Q96T23 1441 aaPredicted RBP46.1■■■■■ 4.97
GFRA4-203ENST00000477160 CADPSQ9ULU8 1353 aa45.94■■■■■ 4.94
GFRA4-203ENST00000477160 PDS5BQ9NTI5 1447 aa45.92■■■■■ 4.94
GFRA4-203ENST00000477160 TOP2AP11388 1531 aaKnown RBP45.78■■■■■ 4.92
GFRA4-203ENST00000477160 THOC2Q8NI27 1593 aaKnown RBP45.76■■■■■ 4.92
GFRA4-203ENST00000477160 KIF21AQ7Z4S6 1674 aa45.71■■■■■ 4.91
GFRA4-203ENST00000477160 DNAJC5Q9H3Z4 198 aa45.55■■■■■ 4.88
GFRA4-203ENST00000477160 CFTRP13569 1480 aa45.51■■■■■ 4.88
GFRA4-203ENST00000477160 MRC2Q9UBG0 1479 aa45.45■■■■■ 4.87
GFRA4-203ENST00000477160 CEP164Q9UPV0 1460 aa45.38■■■■■ 4.86
GFRA4-203ENST00000477160 FANCD2Q9BXW9 1451 aa45.37■■■■■ 4.85
GFRA4-203ENST00000477160 WDR62O43379 1518 aa45.31■■■■■ 4.84
GFRA4-203ENST00000477160 CCDC88BA6NC98 1476 aa45.25■■■■■ 4.83
GFRA4-203ENST00000477160 PRDM2Q13029 1718 aa44.99■■■■■ 4.79
GFRA4-203ENST00000477160 URB2Q14146 1524 aaKnown RBP44.94■■■■■ 4.78
GFRA4-203ENST00000477160 ABCC8Q09428 1581 aa44.58■■■■■ 4.73
GFRA4-203ENST00000477160 TOPBP1Q92547 1522 aa44.57■■■■■ 4.73
GFRA4-203ENST00000477160 IFT140Q96RY7 1462 aa44.48■■■■■ 4.71
GFRA4-203ENST00000477160 DNMBPQ6XZF7 1577 aa44.45■■■■■ 4.71
GFRA4-203ENST00000477160 SUPT5HO00267 1087 aaKnown RBP44.44■■■■■ 4.7
GFRA4-203ENST00000477160 ZNF608Q9ULD9 1512 aaPredicted RBP44.29■■■■■ 4.68
GFRA4-203ENST00000477160 OSCARQ8IYS5 282 aa44.2■■■■■ 4.67
GFRA4-203ENST00000477160 POLA1P09884 1462 aaPredicted RBP44.15■■■■■ 4.66
GFRA4-203ENST00000477160 TARBP1Q13395 1621 aaKnown RBP44.1■■■■■ 4.65
GFRA4-203ENST00000477160 EIF4G3O43432 1585 aaKnown RBP44.06■■■■■ 4.64
GFRA4-203ENST00000477160 SOGA1O94964 1423 aa43.99■■■■■ 4.63
GFRA4-203ENST00000477160 CUX1P39880 1505 aa43.98■■■■■ 4.63
GFRA4-203ENST00000477160 AQRO60306 1485 aaKnown RBP eCLIP43.97■■■■■ 4.63
GFRA4-203ENST00000477160 RAD54L2Q9Y4B4 1467 aa43.96■■■■■ 4.63
GFRA4-203ENST00000477160 FGD5Q6ZNL6 1462 aa43.95■■■■■ 4.63
GFRA4-203ENST00000477160 TDRD9Q8NDG6 1382 aaKnown RBP43.8■■■■■ 4.6
GFRA4-203ENST00000477160 WDR97A6NE52 1622 aa43.77■■■■■ 4.6
GFRA4-203ENST00000477160 TRIM41Q8WV44 630 aa43.72■■■■■ 4.59
GFRA4-203ENST00000477160 FBLN2P98095 1184 aa43.59■■■■■ 4.57
GFRA4-203ENST00000477160 CHD1O14646 1710 aa43.58■■■■■ 4.57
GFRA4-203ENST00000477160 GRIN2BQ13224 1484 aa43.55■■■■■ 4.56
GFRA4-203ENST00000477160 SNAPC4Q5SXM2 1469 aa43.55■■■■■ 4.56
GFRA4-203ENST00000477160 ABCA10Q8WWZ4 1543 aa43.51■■■■■ 4.56
GFRA4-203ENST00000477160 MAGI1Q96QZ7 1491 aaPredicted RBP43.51■■■■■ 4.56
GFRA4-203ENST00000477160 WRNQ14191 1432 aaPredicted RBP eCLIP43.5■■■■■ 4.55
GFRA4-203ENST00000477160 RIMBP3CA6NJZ7 1639 aa43.46■■■■■ 4.55
GFRA4-203ENST00000477160 RIMBP3BA6NNM3 1639 aa43.46■■■■■ 4.55
GFRA4-203ENST00000477160 RIMBP3Q9UFD9 1639 aa43.46■■■■■ 4.55
GFRA4-203ENST00000477160 GAPVD1Q14C86 1478 aa43.45■■■■■ 4.55
GFRA4-203ENST00000477160 TOP2BQ02880 1626 aa43.43■■■■■ 4.54
GFRA4-203ENST00000477160 ARHGEF11O15085 1522 aa43.43■■■■■ 4.54
GFRA4-203ENST00000477160 BIVM-ERCC5R4GMW8 1640 aa43.4■■■■■ 4.54
GFRA4-203ENST00000477160 CHMP7Q8WUX9 453 aaPredicted RBP43.4■■■■■ 4.54
GFRA4-203ENST00000477160 SYNJ1O43426 1573 aa43.36■■■■■ 4.53
GFRA4-203ENST00000477160 ABCA5Q8WWZ7 1642 aa43.35■■■■■ 4.53
GFRA4-203ENST00000477160 SYNJ2O15056 1496 aa43.33■■■■■ 4.53
GFRA4-203ENST00000477160 PBRM1Q86U86 1689 aa43.3■■■■■ 4.52
GFRA4-203ENST00000477160 CLASP1Q7Z460 1538 aa43.17■■■■■ 4.5
GFRA4-203ENST00000477160 CYB5RLQ6IPT4 315 aa43.08■■■■■ 4.49
GFRA4-203ENST00000477160 ARAP1Q96P48 1450 aa43.02■■■■■ 4.48
GFRA4-203ENST00000477160 ADAMTS12P58397 1594 aa42.99■■■■■ 4.47
GFRA4-203ENST00000477160 ERICH3Q5RHP9 1530 aa42.97■■■■■ 4.47
GFRA4-203ENST00000477160 GRIN2AQ12879 1464 aa42.97■■■■■ 4.47
GFRA4-203ENST00000477160 FHAD1B1AJZ9 1412 aa42.95■■■■■ 4.47
GFRA4-203ENST00000477160 NUP160Q12769 1436 aa42.82■■■■■ 4.45
GFRA4-203ENST00000477160 CEP170Q5SW79 1584 aa42.74■■■■■ 4.43
GFRA4-203ENST00000477160 KIF27Q86VH2 1401 aa42.66■■■■■ 4.42
GFRA4-203ENST00000477160 IGF1RP08069 1367 aa42.55■■■■■ 4.4
GFRA4-203ENST00000477160 SHROOM2Q13796 1616 aa42.53■■■■■ 4.4
GFRA4-203ENST00000477160 ERCC6L2Q5T890 1561 aa42.48■■■■■ 4.39
GFRA4-203ENST00000477160 TRHP20396 242 aaPredicted RBP42.44■■■■■ 4.38
GFRA4-203ENST00000477160 CUL7Q14999 1698 aa42.43■■■■■ 4.38
GFRA4-203ENST00000477160 JPH4Q96JJ6 628 aa42.4■■■■■ 4.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms