RNA–Protein interactions for RNA: ENST00000477102.1

SH3KBP1-208, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 5

Gene SH3KBP1, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-208ENST00000477102 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
SH3KBP1-208ENST00000477102 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
SH3KBP1-208ENST00000477102 ABCC9O60706 1549 aa24.86■■□□□ 1.57
SH3KBP1-208ENST00000477102 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
SH3KBP1-208ENST00000477102 RB1CC1Q8TDY2 1594 aa23.6■■□□□ 1.37
SH3KBP1-208ENST00000477102 NACADO15069 1562 aa23.53■■□□□ 1.36
SH3KBP1-208ENST00000477102 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
SH3KBP1-208ENST00000477102 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
SH3KBP1-208ENST00000477102 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
SH3KBP1-208ENST00000477102 DCAF1Q9Y4B6 1507 aa23.2■■□□□ 1.3
SH3KBP1-208ENST00000477102 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
SH3KBP1-208ENST00000477102 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
SH3KBP1-208ENST00000477102 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
SH3KBP1-208ENST00000477102 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
SH3KBP1-208ENST00000477102 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
SH3KBP1-208ENST00000477102 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
SH3KBP1-208ENST00000477102 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
SH3KBP1-208ENST00000477102 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
SH3KBP1-208ENST00000477102 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
SH3KBP1-208ENST00000477102 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
SH3KBP1-208ENST00000477102 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
SH3KBP1-208ENST00000477102 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
SH3KBP1-208ENST00000477102 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
SH3KBP1-208ENST00000477102 CUX2O14529 1486 aa21.73■■□□□ 1.07
SH3KBP1-208ENST00000477102 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
SH3KBP1-208ENST00000477102 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
SH3KBP1-208ENST00000477102 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
SH3KBP1-208ENST00000477102 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
SH3KBP1-208ENST00000477102 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
SH3KBP1-208ENST00000477102 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
SH3KBP1-208ENST00000477102 WIZO95785 1651 aa21.43■■□□□ 1.02
SH3KBP1-208ENST00000477102 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
SH3KBP1-208ENST00000477102 NESP48681 1621 aa21.33■■□□□ 1
SH3KBP1-208ENST00000477102 TRIM41Q8WV44 630 aa21.29■■□□□ 1
SH3KBP1-208ENST00000477102 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
SH3KBP1-208ENST00000477102 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
SH3KBP1-208ENST00000477102 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
SH3KBP1-208ENST00000477102 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
SH3KBP1-208ENST00000477102 THOC2Q8NI27 1593 aaKnown RBP21.02■□□□□ 0.95
SH3KBP1-208ENST00000477102 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
SH3KBP1-208ENST00000477102 CFTRP13569 1480 aa20.95■□□□□ 0.94
SH3KBP1-208ENST00000477102 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
SH3KBP1-208ENST00000477102 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
SH3KBP1-208ENST00000477102 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
SH3KBP1-208ENST00000477102 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
SH3KBP1-208ENST00000477102 WDR62O43379 1518 aa20.79■□□□□ 0.92
SH3KBP1-208ENST00000477102 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
SH3KBP1-208ENST00000477102 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
SH3KBP1-208ENST00000477102 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
SH3KBP1-208ENST00000477102 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
SH3KBP1-208ENST00000477102 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
SH3KBP1-208ENST00000477102 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
SH3KBP1-208ENST00000477102 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
SH3KBP1-208ENST00000477102 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
SH3KBP1-208ENST00000477102 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
SH3KBP1-208ENST00000477102 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
SH3KBP1-208ENST00000477102 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
SH3KBP1-208ENST00000477102 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
SH3KBP1-208ENST00000477102 POLA1P09884 1462 aaPredicted RBP20.34■□□□□ 0.85
SH3KBP1-208ENST00000477102 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.84
SH3KBP1-208ENST00000477102 CUX1P39880 1505 aa20.32■□□□□ 0.84
SH3KBP1-208ENST00000477102 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
SH3KBP1-208ENST00000477102 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
SH3KBP1-208ENST00000477102 EIF4G3O43432 1585 aaKnown RBP20.26■□□□□ 0.83
SH3KBP1-208ENST00000477102 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
SH3KBP1-208ENST00000477102 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
SH3KBP1-208ENST00000477102 SOGA1O94964 1423 aa20.23■□□□□ 0.83
SH3KBP1-208ENST00000477102 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
SH3KBP1-208ENST00000477102 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.83
SH3KBP1-208ENST00000477102 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
SH3KBP1-208ENST00000477102 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
SH3KBP1-208ENST00000477102 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
SH3KBP1-208ENST00000477102 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
SH3KBP1-208ENST00000477102 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SH3KBP1-208ENST00000477102 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
SH3KBP1-208ENST00000477102 TOP2BQ02880 1626 aa20.08■□□□□ 0.8
SH3KBP1-208ENST00000477102 CHD1O14646 1710 aa20.05■□□□□ 0.8
SH3KBP1-208ENST00000477102 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
SH3KBP1-208ENST00000477102 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
SH3KBP1-208ENST00000477102 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
SH3KBP1-208ENST00000477102 ABCA5Q8WWZ7 1642 aa20.01■□□□□ 0.79
SH3KBP1-208ENST00000477102 GRIN2BQ13224 1484 aa20■□□□□ 0.79
SH3KBP1-208ENST00000477102 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
SH3KBP1-208ENST00000477102 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
SH3KBP1-208ENST00000477102 MAGI1Q96QZ7 1491 aaPredicted RBP19.95■□□□□ 0.78
SH3KBP1-208ENST00000477102 FBLN2P98095 1184 aa19.95■□□□□ 0.78
SH3KBP1-208ENST00000477102 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
SH3KBP1-208ENST00000477102 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
SH3KBP1-208ENST00000477102 CLASP1Q7Z460 1538 aa19.84■□□□□ 0.77
SH3KBP1-208ENST00000477102 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
SH3KBP1-208ENST00000477102 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
SH3KBP1-208ENST00000477102 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
SH3KBP1-208ENST00000477102 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
SH3KBP1-208ENST00000477102 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
SH3KBP1-208ENST00000477102 NUP160Q12769 1436 aa19.69■□□□□ 0.74
SH3KBP1-208ENST00000477102 IGF1RP08069 1367 aa19.67■□□□□ 0.74
SH3KBP1-208ENST00000477102 KIF27Q86VH2 1401 aa19.66■□□□□ 0.74
SH3KBP1-208ENST00000477102 ERCC6L2Q5T890 1561 aa19.6■□□□□ 0.73
SH3KBP1-208ENST00000477102 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
SH3KBP1-208ENST00000477102 CUL7Q14999 1698 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms