RNA–Protein interactions for RNA: ENST00000477050.1

NBPF3-209, Transcript of NBPF member 3, humanhuman

TSL 5

Gene NBPF3, Length 550 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-209ENST00000477050 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
NBPF3-209ENST00000477050 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
NBPF3-209ENST00000477050 ABCC9O60706 1549 aa23.43■■□□□ 1.34
NBPF3-209ENST00000477050 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
NBPF3-209ENST00000477050 NACADO15069 1562 aa22.48■■□□□ 1.19
NBPF3-209ENST00000477050 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
NBPF3-209ENST00000477050 MYO15BQ96JP2 1530 aa22.39■■□□□ 1.17
NBPF3-209ENST00000477050 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
NBPF3-209ENST00000477050 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.14
NBPF3-209ENST00000477050 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
NBPF3-209ENST00000477050 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
NBPF3-209ENST00000477050 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
NBPF3-209ENST00000477050 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
NBPF3-209ENST00000477050 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
NBPF3-209ENST00000477050 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
NBPF3-209ENST00000477050 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
NBPF3-209ENST00000477050 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
NBPF3-209ENST00000477050 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
NBPF3-209ENST00000477050 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
NBPF3-209ENST00000477050 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
NBPF3-209ENST00000477050 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
NBPF3-209ENST00000477050 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
NBPF3-209ENST00000477050 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
NBPF3-209ENST00000477050 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
NBPF3-209ENST00000477050 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
NBPF3-209ENST00000477050 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
NBPF3-209ENST00000477050 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
NBPF3-209ENST00000477050 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
NBPF3-209ENST00000477050 WIZO95785 1651 aa20.28■□□□□ 0.84
NBPF3-209ENST00000477050 NESP48681 1621 aa20.24■□□□□ 0.83
NBPF3-209ENST00000477050 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
NBPF3-209ENST00000477050 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
NBPF3-209ENST00000477050 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.82
NBPF3-209ENST00000477050 CUX2O14529 1486 aa20.14■□□□□ 0.81
NBPF3-209ENST00000477050 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
NBPF3-209ENST00000477050 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
NBPF3-209ENST00000477050 CFTRP13569 1480 aa20.02■□□□□ 0.8
NBPF3-209ENST00000477050 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
NBPF3-209ENST00000477050 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
NBPF3-209ENST00000477050 KIF21AQ7Z4S6 1674 aa19.9■□□□□ 0.78
NBPF3-209ENST00000477050 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
NBPF3-209ENST00000477050 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
NBPF3-209ENST00000477050 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
NBPF3-209ENST00000477050 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
NBPF3-209ENST00000477050 WDR62O43379 1518 aa19.8■□□□□ 0.76
NBPF3-209ENST00000477050 URB2Q14146 1524 aaKnown RBP19.68■□□□□ 0.74
NBPF3-209ENST00000477050 SUPT5HO00267 1087 aaKnown RBP19.64■□□□□ 0.73
NBPF3-209ENST00000477050 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
NBPF3-209ENST00000477050 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
NBPF3-209ENST00000477050 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
NBPF3-209ENST00000477050 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
NBPF3-209ENST00000477050 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
NBPF3-209ENST00000477050 ZNF608Q9ULD9 1512 aaPredicted RBP19.37■□□□□ 0.69
NBPF3-209ENST00000477050 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
NBPF3-209ENST00000477050 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
NBPF3-209ENST00000477050 SOGA1O94964 1423 aa19.33■□□□□ 0.68
NBPF3-209ENST00000477050 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
NBPF3-209ENST00000477050 CUX1P39880 1505 aa19.31■□□□□ 0.68
NBPF3-209ENST00000477050 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.68
NBPF3-209ENST00000477050 FGD5Q6ZNL6 1462 aa19.27■□□□□ 0.67
NBPF3-209ENST00000477050 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.67
NBPF3-209ENST00000477050 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
NBPF3-209ENST00000477050 EIF4G3O43432 1585 aaKnown RBP19.2■□□□□ 0.66
NBPF3-209ENST00000477050 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
NBPF3-209ENST00000477050 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
NBPF3-209ENST00000477050 ABCA10Q8WWZ4 1543 aa19.12■□□□□ 0.65
NBPF3-209ENST00000477050 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
NBPF3-209ENST00000477050 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
NBPF3-209ENST00000477050 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
NBPF3-209ENST00000477050 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
NBPF3-209ENST00000477050 BIVM-ERCC5R4GMW8 1640 aa19.06■□□□□ 0.64
NBPF3-209ENST00000477050 FBLN2P98095 1184 aa19.05■□□□□ 0.64
NBPF3-209ENST00000477050 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
NBPF3-209ENST00000477050 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
NBPF3-209ENST00000477050 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
NBPF3-209ENST00000477050 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
NBPF3-209ENST00000477050 ABCA5Q8WWZ7 1642 aa18.98■□□□□ 0.63
NBPF3-209ENST00000477050 CHD1O14646 1710 aa18.95■□□□□ 0.62
NBPF3-209ENST00000477050 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
NBPF3-209ENST00000477050 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
NBPF3-209ENST00000477050 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
NBPF3-209ENST00000477050 RIMBP3CA6NJZ7 1639 aa18.89■□□□□ 0.61
NBPF3-209ENST00000477050 RIMBP3BA6NNM3 1639 aa18.89■□□□□ 0.61
NBPF3-209ENST00000477050 RIMBP3Q9UFD9 1639 aa18.89■□□□□ 0.61
NBPF3-209ENST00000477050 PBRM1Q86U86 1689 aa18.88■□□□□ 0.61
NBPF3-209ENST00000477050 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
NBPF3-209ENST00000477050 CLASP1Q7Z460 1538 aa18.87■□□□□ 0.61
NBPF3-209ENST00000477050 GRIN2AQ12879 1464 aa18.83■□□□□ 0.6
NBPF3-209ENST00000477050 CYB5RLQ6IPT4 315 aa18.82■□□□□ 0.6
NBPF3-209ENST00000477050 IGF1RP08069 1367 aa18.81■□□□□ 0.6
NBPF3-209ENST00000477050 NUP160Q12769 1436 aa18.8■□□□□ 0.6
NBPF3-209ENST00000477050 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
NBPF3-209ENST00000477050 ADAMTS12P58397 1594 aa18.79■□□□□ 0.6
NBPF3-209ENST00000477050 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
NBPF3-209ENST00000477050 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
NBPF3-209ENST00000477050 JPH4Q96JJ6 628 aa18.67■□□□□ 0.58
NBPF3-209ENST00000477050 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
NBPF3-209ENST00000477050 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
NBPF3-209ENST00000477050 CUL7Q14999 1698 aa18.6■□□□□ 0.57
NBPF3-209ENST00000477050 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms