RNA–Protein interactions for RNA: ENST00000477045.1

FAM213B-210, Transcript of Prostamide/prostaglandin F synthase, humanhuman

TSL 2

Gene FAM213B, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213B-210ENST00000477045 NISCHQ9Y2I1 1504 aa52.72■■■■■ 6.03
FAM213B-210ENST00000477045 ABCC9O60706 1549 aa47.44■■■■■ 5.18
FAM213B-210ENST00000477045 CCDC180Q9P1Z9 1646 aa47.42■■■■■ 5.18
FAM213B-210ENST00000477045 RB1CC1Q8TDY2 1594 aa45.16■■■■■ 4.82
FAM213B-210ENST00000477045 NACADO15069 1562 aa44.85■■■■■ 4.77
FAM213B-210ENST00000477045 DNAJC5BQ9UF47 199 aa44.66■■■■■ 4.74
FAM213B-210ENST00000477045 DCAF8L2P0C7V8 631 aa44.39■■■■■ 4.7
FAM213B-210ENST00000477045 MYO15BQ96JP2 1530 aa44.24■■■■■ 4.67
FAM213B-210ENST00000477045 UNC13AQ9UPW8 1703 aa44.21■■■■■ 4.67
FAM213B-210ENST00000477045 PABPN1Q86U42 306 aaKnown RBP eCLIP44.11■■■■■ 4.65
FAM213B-210ENST00000477045 BICRAQ9NZM4 1560 aa43.88■■■■■ 4.62
FAM213B-210ENST00000477045 ZCCHC6Q5VYS8 1495 aaKnown RBP43.67■■■■■ 4.58
FAM213B-210ENST00000477045 DCAF1Q9Y4B6 1507 aa43.61■■■■■ 4.57
FAM213B-210ENST00000477045 SHROOM4Q9ULL8 1493 aa43.32■■■■■ 4.52
FAM213B-210ENST00000477045 SCRIBQ14160 1630 aa43.1■■■■■ 4.49
FAM213B-210ENST00000477045 CC2D2AQ9P2K1 1620 aa42.91■■■■■ 4.46
FAM213B-210ENST00000477045 EIF4G1Q04637 1599 aaKnown RBP42.79■■■■■ 4.44
FAM213B-210ENST00000477045 CECR2Q9BXF3 1484 aa42.78■■■■■ 4.44
FAM213B-210ENST00000477045 NCAPD3P42695 1498 aa41.41■■■■■ 4.22
FAM213B-210ENST00000477045 ATAD2BQ9ULI0 1458 aa41.23■■■■■ 4.19
FAM213B-210ENST00000477045 SMARCA4P51532 1647 aa41.16■■■■■ 4.18
FAM213B-210ENST00000477045 DNAJC5Q9H3Z4 198 aa41.14■■■■■ 4.18
FAM213B-210ENST00000477045 SMARCA2P51531 1590 aa41.12■■■■■ 4.17
FAM213B-210ENST00000477045 HMGXB3Q12766 1538 aa41.09■■■■■ 4.17
FAM213B-210ENST00000477045 CUX2O14529 1486 aa41.02■■■■■ 4.16
FAM213B-210ENST00000477045 ERCC6Q03468 1493 aa40.96■■■■■ 4.15
FAM213B-210ENST00000477045 BAZ1AQ9NRL2 1556 aaPredicted RBP40.93■■■■■ 4.14
FAM213B-210ENST00000477045 PEG3Q9GZU2 1588 aa40.82■■■■■ 4.12
FAM213B-210ENST00000477045 BAZ1BQ9UIG0 1483 aaKnown RBP40.79■■■■■ 4.12
FAM213B-210ENST00000477045 NESP48681 1621 aa40.73■■■■■ 4.11
FAM213B-210ENST00000477045 MROH2BQ7Z745 1585 aa40.6■■■■■ 4.09
FAM213B-210ENST00000477045 LAMC3Q9Y6N6 1575 aa40.48■■■■■ 4.07
FAM213B-210ENST00000477045 THOC2Q8NI27 1593 aaKnown RBP40.4■■■■■ 4.06
FAM213B-210ENST00000477045 KIF21AQ7Z4S6 1674 aa40.25■■■■■ 4.03
FAM213B-210ENST00000477045 PDS5BQ9NTI5 1447 aa40.22■■■■■ 4.03
FAM213B-210ENST00000477045 WIZO95785 1651 aa40.11■■■■■ 4.01
FAM213B-210ENST00000477045 CADPSQ9ULU8 1353 aa40.1■■■■■ 4.01
FAM213B-210ENST00000477045 MRC2Q9UBG0 1479 aa39.88■■■■□ 3.98
FAM213B-210ENST00000477045 WDR62O43379 1518 aa39.82■■■■□ 3.97
FAM213B-210ENST00000477045 RSF1Q96T23 1441 aaPredicted RBP39.71■■■■□ 3.95
FAM213B-210ENST00000477045 CEP164Q9UPV0 1460 aa39.68■■■■□ 3.94
FAM213B-210ENST00000477045 CFTRP13569 1480 aa39.64■■■■□ 3.94
FAM213B-210ENST00000477045 FANCD2Q9BXW9 1451 aa39.63■■■■□ 3.94
FAM213B-210ENST00000477045 TOP2AP11388 1531 aaKnown RBP39.6■■■■□ 3.93
FAM213B-210ENST00000477045 URB2Q14146 1524 aaKnown RBP39.33■■■■□ 3.89
FAM213B-210ENST00000477045 PRDM2Q13029 1718 aa39.29■■■■□ 3.88
FAM213B-210ENST00000477045 TRIM41Q8WV44 630 aa39.16■■■■□ 3.86
FAM213B-210ENST00000477045 CCDC88BA6NC98 1476 aa39.14■■■■□ 3.86
FAM213B-210ENST00000477045 OSCARQ8IYS5 282 aa39.07■■■■□ 3.85
FAM213B-210ENST00000477045 IFT140Q96RY7 1462 aa38.91■■■■□ 3.82
FAM213B-210ENST00000477045 TOPBP1Q92547 1522 aa38.89■■■■□ 3.82
FAM213B-210ENST00000477045 ZNF608Q9ULD9 1512 aaPredicted RBP38.84■■■■□ 3.81
FAM213B-210ENST00000477045 ABCC8Q09428 1581 aa38.82■■■■□ 3.8
FAM213B-210ENST00000477045 DNMBPQ6XZF7 1577 aa38.74■■■■□ 3.79
FAM213B-210ENST00000477045 EIF4G3O43432 1585 aaKnown RBP38.65■■■■□ 3.78
FAM213B-210ENST00000477045 RIMBP3CA6NJZ7 1639 aa38.61■■■■□ 3.77
FAM213B-210ENST00000477045 RIMBP3BA6NNM3 1639 aa38.61■■■■□ 3.77
FAM213B-210ENST00000477045 RIMBP3Q9UFD9 1639 aa38.61■■■■□ 3.77
FAM213B-210ENST00000477045 TARBP1Q13395 1621 aaKnown RBP38.59■■■■□ 3.77
FAM213B-210ENST00000477045 ARHGEF11O15085 1522 aa38.48■■■■□ 3.75
FAM213B-210ENST00000477045 POLA1P09884 1462 aaPredicted RBP38.47■■■■□ 3.75
FAM213B-210ENST00000477045 AQRO60306 1485 aaKnown RBP eCLIP38.46■■■■□ 3.756e-7■■■□□ 18.4
FAM213B-210ENST00000477045 CHD1O14646 1710 aa38.41■■■■□ 3.74
FAM213B-210ENST00000477045 RAD54L2Q9Y4B4 1467 aa38.3■■■■□ 3.72
FAM213B-210ENST00000477045 SOGA1O94964 1423 aa38.27■■■■□ 3.72
FAM213B-210ENST00000477045 WDR97A6NE52 1622 aa38.21■■■■□ 3.71
FAM213B-210ENST00000477045 TDRD9Q8NDG6 1382 aaKnown RBP38.19■■■■□ 3.7
FAM213B-210ENST00000477045 FGD5Q6ZNL6 1462 aa38.19■■■■□ 3.7
FAM213B-210ENST00000477045 CUX1P39880 1505 aa38.17■■■■□ 3.7
FAM213B-210ENST00000477045 FBLN2P98095 1184 aa38.16■■■■□ 3.7
FAM213B-210ENST00000477045 CYB5RLQ6IPT4 315 aa38.13■■■■□ 3.69
FAM213B-210ENST00000477045 ARAP1Q96P48 1450 aa38.09■■■■□ 3.69
FAM213B-210ENST00000477045 SNAPC4Q5SXM2 1469 aa38.07■■■■□ 3.68
FAM213B-210ENST00000477045 MAGI1Q96QZ7 1491 aaPredicted RBP38.01■■■■□ 3.67
FAM213B-210ENST00000477045 CLASP1Q7Z460 1538 aa37.97■■■■□ 3.67
FAM213B-210ENST00000477045 GRIN2BQ13224 1484 aa37.97■■■■□ 3.67
FAM213B-210ENST00000477045 CHMP7Q8WUX9 453 aaPredicted RBP37.91■■■■□ 3.66
FAM213B-210ENST00000477045 SYNJ1O43426 1573 aa37.9■■■■□ 3.66
FAM213B-210ENST00000477045 SYNJ2O15056 1496 aa37.88■■■■□ 3.65
FAM213B-210ENST00000477045 PBRM1Q86U86 1689 aa37.85■■■■□ 3.65
FAM213B-210ENST00000477045 GAPVD1Q14C86 1478 aa37.82■■■■□ 3.64
FAM213B-210ENST00000477045 ABCA10Q8WWZ4 1543 aa37.79■■■■□ 3.64
FAM213B-210ENST00000477045 ABCA5Q8WWZ7 1642 aa37.76■■■■□ 3.63
FAM213B-210ENST00000477045 SUPT5HO00267 1087 aaKnown RBP37.72■■■■□ 3.63
FAM213B-210ENST00000477045 TRHP20396 242 aaPredicted RBP37.71■■■■□ 3.63
FAM213B-210ENST00000477045 WRNQ14191 1432 aaPredicted RBP eCLIP37.59■■■■□ 3.61
FAM213B-210ENST00000477045 BIVM-ERCC5R4GMW8 1640 aa37.54■■■■□ 3.6
FAM213B-210ENST00000477045 TOP2BQ02880 1626 aa37.53■■■■□ 3.6
FAM213B-210ENST00000477045 GRIN2AQ12879 1464 aa37.49■■■■□ 3.59
FAM213B-210ENST00000477045 ADAMTS12P58397 1594 aa37.46■■■■□ 3.59
FAM213B-210ENST00000477045 NUP160Q12769 1436 aa37.4■■■■□ 3.58
FAM213B-210ENST00000477045 CEP170Q5SW79 1584 aa37.37■■■■□ 3.57
FAM213B-210ENST00000477045 FHAD1B1AJZ9 1412 aa37.34■■■■□ 3.57
FAM213B-210ENST00000477045 ERCC6L2Q5T890 1561 aa37.33■■■■□ 3.57
FAM213B-210ENST00000477045 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.57
FAM213B-210ENST00000477045 SHROOM2Q13796 1616 aa37.28■■■■□ 3.56
FAM213B-210ENST00000477045 PRG4Q92954 1404 aaPredicted RBP37■■■■□ 3.51
FAM213B-210ENST00000477045 JPH4Q96JJ6 628 aa36.97■■■■□ 3.51
FAM213B-210ENST00000477045 RUSC2Q8N2Y8 1516 aa36.94■■■■□ 3.5
FAM213B-210ENST00000477045 KIF13AQ9H1H9 1805 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms