RNA–Protein interactions for RNA: ENST00000477031.6

LCK-211, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 4

Gene LCK, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-211ENST00000477031 NISCHQ9Y2I1 1504 aa28.45■■■□□ 2.15
LCK-211ENST00000477031 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
LCK-211ENST00000477031 ABCC9O60706 1549 aa24.7■■□□□ 1.54
LCK-211ENST00000477031 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
LCK-211ENST00000477031 NACADO15069 1562 aa23.69■■□□□ 1.38
LCK-211ENST00000477031 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
LCK-211ENST00000477031 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
LCK-211ENST00000477031 MYO15BQ96JP2 1530 aa23.61■■□□□ 1.37
LCK-211ENST00000477031 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
LCK-211ENST00000477031 PABPN1Q86U42 306 aaKnown RBP eCLIP23.19■■□□□ 1.3
LCK-211ENST00000477031 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
LCK-211ENST00000477031 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
LCK-211ENST00000477031 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
LCK-211ENST00000477031 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
LCK-211ENST00000477031 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
LCK-211ENST00000477031 EIF4G1Q04637 1599 aaKnown RBP22.41■■□□□ 1.18
LCK-211ENST00000477031 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
LCK-211ENST00000477031 CECR2Q9BXF3 1484 aa22.23■■□□□ 1.15
LCK-211ENST00000477031 SMARCA4P51532 1647 aa21.99■■□□□ 1.11
LCK-211ENST00000477031 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
LCK-211ENST00000477031 BAZ1AQ9NRL2 1556 aaPredicted RBP21.97■■□□□ 1.11
LCK-211ENST00000477031 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
LCK-211ENST00000477031 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
LCK-211ENST00000477031 SMARCA2P51531 1590 aa21.83■■□□□ 1.09
LCK-211ENST00000477031 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
LCK-211ENST00000477031 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
LCK-211ENST00000477031 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
LCK-211ENST00000477031 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
LCK-211ENST00000477031 WIZO95785 1651 aa21.65■■□□□ 1.06
LCK-211ENST00000477031 NESP48681 1621 aa21.42■■□□□ 1.02
LCK-211ENST00000477031 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.02
LCK-211ENST00000477031 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
LCK-211ENST00000477031 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
LCK-211ENST00000477031 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
LCK-211ENST00000477031 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
LCK-211ENST00000477031 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
LCK-211ENST00000477031 CFTRP13569 1480 aa21.19■□□□□ 0.98
LCK-211ENST00000477031 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
LCK-211ENST00000477031 FANCD2Q9BXW9 1451 aa21.02■□□□□ 0.96
LCK-211ENST00000477031 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.95
LCK-211ENST00000477031 CUX2O14529 1486 aa21.01■□□□□ 0.95
LCK-211ENST00000477031 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
LCK-211ENST00000477031 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
LCK-211ENST00000477031 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
LCK-211ENST00000477031 WDR62O43379 1518 aa20.86■□□□□ 0.93
LCK-211ENST00000477031 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
LCK-211ENST00000477031 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
LCK-211ENST00000477031 DNAJC5Q9H3Z4 198 aa20.73■□□□□ 0.91
LCK-211ENST00000477031 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
LCK-211ENST00000477031 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
LCK-211ENST00000477031 DNMBPQ6XZF7 1577 aa20.61■□□□□ 0.89
LCK-211ENST00000477031 CUX1P39880 1505 aa20.57■□□□□ 0.88
LCK-211ENST00000477031 POLA1P09884 1462 aaPredicted RBP20.53■□□□□ 0.88
LCK-211ENST00000477031 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
LCK-211ENST00000477031 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
LCK-211ENST00000477031 RAD54L2Q9Y4B4 1467 aa20.48■□□□□ 0.87
LCK-211ENST00000477031 SOGA1O94964 1423 aa20.47■□□□□ 0.87
LCK-211ENST00000477031 FGD5Q6ZNL6 1462 aa20.46■□□□□ 0.87
LCK-211ENST00000477031 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.87
LCK-211ENST00000477031 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
LCK-211ENST00000477031 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.86
LCK-211ENST00000477031 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.85
LCK-211ENST00000477031 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
LCK-211ENST00000477031 TOP2BQ02880 1626 aa20.33■□□□□ 0.84
LCK-211ENST00000477031 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
LCK-211ENST00000477031 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
LCK-211ENST00000477031 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
LCK-211ENST00000477031 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
LCK-211ENST00000477031 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
LCK-211ENST00000477031 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
LCK-211ENST00000477031 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
LCK-211ENST00000477031 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.81
LCK-211ENST00000477031 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
LCK-211ENST00000477031 FBLN2P98095 1184 aa20.11■□□□□ 0.81
LCK-211ENST00000477031 MAGI1Q96QZ7 1491 aaPredicted RBP20.1■□□□□ 0.81
LCK-211ENST00000477031 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
LCK-211ENST00000477031 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
LCK-211ENST00000477031 IGF1RP08069 1367 aa20.03■□□□□ 0.8
LCK-211ENST00000477031 PBRM1Q86U86 1689 aa20■□□□□ 0.79
LCK-211ENST00000477031 TRIM41Q8WV44 630 aa20■□□□□ 0.79
LCK-211ENST00000477031 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
LCK-211ENST00000477031 CHD1O14646 1710 aa19.99■□□□□ 0.79
LCK-211ENST00000477031 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
LCK-211ENST00000477031 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
LCK-211ENST00000477031 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
LCK-211ENST00000477031 ADAMTS12P58397 1594 aa19.92■□□□□ 0.78
LCK-211ENST00000477031 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
LCK-211ENST00000477031 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
LCK-211ENST00000477031 NUP160Q12769 1436 aa19.88■□□□□ 0.77
LCK-211ENST00000477031 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
LCK-211ENST00000477031 CARMIL1Q5VZK9 1371 aa19.84■□□□□ 0.77
LCK-211ENST00000477031 ARHGEF11O15085 1522 aa19.83■□□□□ 0.77
LCK-211ENST00000477031 CEP170Q5SW79 1584 aa19.82■□□□□ 0.76
LCK-211ENST00000477031 RIMBP3CA6NJZ7 1639 aa19.8■□□□□ 0.76
LCK-211ENST00000477031 RIMBP3BA6NNM3 1639 aa19.8■□□□□ 0.76
LCK-211ENST00000477031 RIMBP3Q9UFD9 1639 aa19.8■□□□□ 0.76
LCK-211ENST00000477031 CYB5RLQ6IPT4 315 aa19.74■□□□□ 0.75
LCK-211ENST00000477031 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
LCK-211ENST00000477031 CUL7Q14999 1698 aa19.73■□□□□ 0.75
LCK-211ENST00000477031 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms