RNA–Protein interactions for RNA: ENST00000477012.5

RNF7-203, Transcript of ring finger protein 7, humanhuman

TSL 1 (best)

Gene RNF7, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-203ENST00000477012 NISCHQ9Y2I1 1504 aa41.03■■■■■ 4.16
RNF7-203ENST00000477012 CCDC180Q9P1Z9 1646 aa36.88■■■■□ 3.49
RNF7-203ENST00000477012 ABCC9O60706 1549 aa36.75■■■■□ 3.47
RNF7-203ENST00000477012 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
RNF7-203ENST00000477012 NACADO15069 1562 aa34.79■■■■□ 3.16
RNF7-203ENST00000477012 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
RNF7-203ENST00000477012 DNAJC5BQ9UF47 199 aa34.41■■■■□ 3.1
RNF7-203ENST00000477012 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
RNF7-203ENST00000477012 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
RNF7-203ENST00000477012 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
RNF7-203ENST00000477012 BICRAQ9NZM4 1560 aa34.05■■■■□ 3.04
RNF7-203ENST00000477012 ZCCHC6Q5VYS8 1495 aaKnown RBP34.03■■■■□ 3.04
RNF7-203ENST00000477012 DCAF1Q9Y4B6 1507 aa33.9■■■■□ 3.02
RNF7-203ENST00000477012 SCRIBQ14160 1630 aa33.57■■■□□ 2.96
RNF7-203ENST00000477012 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
RNF7-203ENST00000477012 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
RNF7-203ENST00000477012 EIF4G1Q04637 1599 aaKnown RBP33.19■■■□□ 2.9
RNF7-203ENST00000477012 CECR2Q9BXF3 1484 aa33.11■■■□□ 2.89
RNF7-203ENST00000477012 NCAPD3P42695 1498 aa32.09■■■□□ 2.73
RNF7-203ENST00000477012 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
RNF7-203ENST00000477012 ATAD2BQ9ULI0 1458 aa32.01■■■□□ 2.71
RNF7-203ENST00000477012 SMARCA2P51531 1590 aa31.94■■■□□ 2.7
RNF7-203ENST00000477012 HMGXB3Q12766 1538 aa31.91■■■□□ 2.7
RNF7-203ENST00000477012 BAZ1AQ9NRL2 1556 aaPredicted RBP31.85■■■□□ 2.69
RNF7-203ENST00000477012 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
RNF7-203ENST00000477012 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
RNF7-203ENST00000477012 BAZ1BQ9UIG0 1483 aaKnown RBP31.7■■■□□ 2.66
RNF7-203ENST00000477012 CUX2O14529 1486 aa31.68■■■□□ 2.66
RNF7-203ENST00000477012 MROH2BQ7Z745 1585 aa31.62■■■□□ 2.65
RNF7-203ENST00000477012 NESP48681 1621 aa31.6■■■□□ 2.65
RNF7-203ENST00000477012 DNAJC5Q9H3Z4 198 aa31.55■■■□□ 2.64
RNF7-203ENST00000477012 LAMC3Q9Y6N6 1575 aa31.4■■■□□ 2.62
RNF7-203ENST00000477012 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
RNF7-203ENST00000477012 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
RNF7-203ENST00000477012 WIZO95785 1651 aa31.27■■■□□ 2.6
RNF7-203ENST00000477012 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
RNF7-203ENST00000477012 CADPSQ9ULU8 1353 aa31.09■■■□□ 2.57
RNF7-203ENST00000477012 RSF1Q96T23 1441 aaPredicted RBP30.94■■■□□ 2.54
RNF7-203ENST00000477012 MRC2Q9UBG0 1479 aa30.93■■■□□ 2.54
RNF7-203ENST00000477012 WDR62O43379 1518 aa30.88■■■□□ 2.53
RNF7-203ENST00000477012 TOP2AP11388 1531 aaKnown RBP30.87■■■□□ 2.53
RNF7-203ENST00000477012 CEP164Q9UPV0 1460 aa30.81■■■□□ 2.52
RNF7-203ENST00000477012 CFTRP13569 1480 aa30.77■■■□□ 2.52
RNF7-203ENST00000477012 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
RNF7-203ENST00000477012 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
RNF7-203ENST00000477012 URB2Q14146 1524 aaKnown RBP30.54■■■□□ 2.48
RNF7-203ENST00000477012 CCDC88BA6NC98 1476 aa30.47■■■□□ 2.47
RNF7-203ENST00000477012 TOPBP1Q92547 1522 aa30.21■■■□□ 2.43
RNF7-203ENST00000477012 IFT140Q96RY7 1462 aa30.18■■■□□ 2.42
RNF7-203ENST00000477012 TRIM41Q8WV44 630 aa30.17■■■□□ 2.42
RNF7-203ENST00000477012 ZNF608Q9ULD9 1512 aaPredicted RBP30.15■■■□□ 2.42
RNF7-203ENST00000477012 OSCARQ8IYS5 282 aa30.14■■■□□ 2.42
RNF7-203ENST00000477012 DNMBPQ6XZF7 1577 aa30.12■■■□□ 2.41
RNF7-203ENST00000477012 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
RNF7-203ENST00000477012 EIF4G3O43432 1585 aaKnown RBP30.04■■■□□ 2.4
RNF7-203ENST00000477012 TARBP1Q13395 1621 aaKnown RBP29.99■■■□□ 2.39
RNF7-203ENST00000477012 POLA1P09884 1462 aaPredicted RBP29.9■■■□□ 2.38
RNF7-203ENST00000477012 RIMBP3CA6NJZ7 1639 aa29.89■■■□□ 2.37
RNF7-203ENST00000477012 RIMBP3BA6NNM3 1639 aa29.89■■■□□ 2.37
RNF7-203ENST00000477012 RIMBP3Q9UFD9 1639 aa29.89■■■□□ 2.37
RNF7-203ENST00000477012 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.372e-6■■■■□ 24.2
RNF7-203ENST00000477012 CHD1O14646 1710 aa29.84■■■□□ 2.37
RNF7-203ENST00000477012 RAD54L2Q9Y4B4 1467 aa29.77■■■□□ 2.36
RNF7-203ENST00000477012 ARHGEF11O15085 1522 aa29.76■■■□□ 2.36
RNF7-203ENST00000477012 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
RNF7-203ENST00000477012 CUX1P39880 1505 aa29.71■■■□□ 2.35
RNF7-203ENST00000477012 SOGA1O94964 1423 aa29.71■■■□□ 2.35
RNF7-203ENST00000477012 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
RNF7-203ENST00000477012 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.33
RNF7-203ENST00000477012 SNAPC4Q5SXM2 1469 aa29.58■■■□□ 2.33
RNF7-203ENST00000477012 FBLN2P98095 1184 aa29.57■■■□□ 2.32
RNF7-203ENST00000477012 SUPT5HO00267 1087 aaKnown RBP29.5■■■□□ 2.31
RNF7-203ENST00000477012 MAGI1Q96QZ7 1491 aaPredicted RBP29.49■■■□□ 2.31
RNF7-203ENST00000477012 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
RNF7-203ENST00000477012 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
RNF7-203ENST00000477012 PBRM1Q86U86 1689 aa29.47■■■□□ 2.31
RNF7-203ENST00000477012 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.31
RNF7-203ENST00000477012 CYB5RLQ6IPT4 315 aa29.44■■■□□ 2.3
RNF7-203ENST00000477012 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
RNF7-203ENST00000477012 ABCA5Q8WWZ7 1642 aa29.39■■■□□ 2.3
RNF7-203ENST00000477012 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
RNF7-203ENST00000477012 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
RNF7-203ENST00000477012 ABCA10Q8WWZ4 1543 aa29.38■■■□□ 2.29
RNF7-203ENST00000477012 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
RNF7-203ENST00000477012 BIVM-ERCC5R4GMW8 1640 aa29.29■■■□□ 2.28
RNF7-203ENST00000477012 TOP2BQ02880 1626 aa29.26■■■□□ 2.27
RNF7-203ENST00000477012 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
RNF7-203ENST00000477012 ADAMTS12P58397 1594 aa29.16■■■□□ 2.26
RNF7-203ENST00000477012 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
RNF7-203ENST00000477012 TRHP20396 242 aaPredicted RBP29.08■■■□□ 2.25
RNF7-203ENST00000477012 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
RNF7-203ENST00000477012 NUP160Q12769 1436 aa29.03■■■□□ 2.24
RNF7-203ENST00000477012 ERICH3Q5RHP9 1530 aa29.02■■■□□ 2.24
RNF7-203ENST00000477012 FHAD1B1AJZ9 1412 aa29■■■□□ 2.23
RNF7-203ENST00000477012 ERCC6L2Q5T890 1561 aa29■■■□□ 2.23
RNF7-203ENST00000477012 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
RNF7-203ENST00000477012 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
RNF7-203ENST00000477012 PRG4Q92954 1404 aaPredicted RBP28.7■■■□□ 2.19
RNF7-203ENST00000477012 CUL7Q14999 1698 aa28.64■■■□□ 2.18
RNF7-203ENST00000477012 JPH4Q96JJ6 628 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms