RNA–Protein interactions for RNA: ENST00000477008.1

SEC24C-204, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 2

Gene SEC24C, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-204ENST00000477008 NISCHQ9Y2I1 1504 aa18.69■□□□□ 0.58
SEC24C-204ENST00000477008 ABCC9O60706 1549 aa17.47■□□□□ 0.39
SEC24C-204ENST00000477008 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
SEC24C-204ENST00000477008 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
SEC24C-204ENST00000477008 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
SEC24C-204ENST00000477008 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
SEC24C-204ENST00000477008 RB1CC1Q8TDY2 1594 aa16.43■□□□□ 0.22
SEC24C-204ENST00000477008 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEC24C-204ENST00000477008 NACADO15069 1562 aa16.2■□□□□ 0.18
SEC24C-204ENST00000477008 DCAF8L2P0C7V8 631 aa16.16■□□□□ 0.18
SEC24C-204ENST00000477008 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
SEC24C-204ENST00000477008 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
SEC24C-204ENST00000477008 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
SEC24C-204ENST00000477008 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
SEC24C-204ENST00000477008 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
SEC24C-204ENST00000477008 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
SEC24C-204ENST00000477008 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
SEC24C-204ENST00000477008 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
SEC24C-204ENST00000477008 DCAF1Q9Y4B6 1507 aa15.42■□□□□ 0.06
SEC24C-204ENST00000477008 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
SEC24C-204ENST00000477008 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
SEC24C-204ENST00000477008 CUX2O14529 1486 aa15.3■□□□□ 0.04
SEC24C-204ENST00000477008 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
SEC24C-204ENST00000477008 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
SEC24C-204ENST00000477008 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
SEC24C-204ENST00000477008 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
SEC24C-204ENST00000477008 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
SEC24C-204ENST00000477008 NESP48681 1621 aa14.84□□□□□ -0.03
SEC24C-204ENST00000477008 SMARCA2P51531 1590 aa14.77□□□□□ -0.04
SEC24C-204ENST00000477008 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
SEC24C-204ENST00000477008 THOC2Q8NI27 1593 aaKnown RBP14.74□□□□□ -0.05
SEC24C-204ENST00000477008 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
SEC24C-204ENST00000477008 PDS5BQ9NTI5 1447 aa14.7□□□□□ -0.06
SEC24C-204ENST00000477008 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
SEC24C-204ENST00000477008 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
SEC24C-204ENST00000477008 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
SEC24C-204ENST00000477008 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
SEC24C-204ENST00000477008 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
SEC24C-204ENST00000477008 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
SEC24C-204ENST00000477008 MRC2Q9UBG0 1479 aa14.53□□□□□ -0.08
SEC24C-204ENST00000477008 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
SEC24C-204ENST00000477008 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.08
SEC24C-204ENST00000477008 WDR62O43379 1518 aa14.47□□□□□ -0.09
SEC24C-204ENST00000477008 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
SEC24C-204ENST00000477008 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
SEC24C-204ENST00000477008 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
SEC24C-204ENST00000477008 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
SEC24C-204ENST00000477008 RIMBP3CA6NJZ7 1639 aa14.32□□□□□ -0.12
SEC24C-204ENST00000477008 RIMBP3BA6NNM3 1639 aa14.32□□□□□ -0.12
SEC24C-204ENST00000477008 RIMBP3Q9UFD9 1639 aa14.32□□□□□ -0.12
SEC24C-204ENST00000477008 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
SEC24C-204ENST00000477008 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
SEC24C-204ENST00000477008 CFTRP13569 1480 aa14.21□□□□□ -0.13
SEC24C-204ENST00000477008 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
SEC24C-204ENST00000477008 WIZO95785 1651 aa14.16□□□□□ -0.14
SEC24C-204ENST00000477008 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
SEC24C-204ENST00000477008 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
SEC24C-204ENST00000477008 FBLN2P98095 1184 aa14.06□□□□□ -0.16
SEC24C-204ENST00000477008 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
SEC24C-204ENST00000477008 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
SEC24C-204ENST00000477008 ABCC8Q09428 1581 aa14□□□□□ -0.17
SEC24C-204ENST00000477008 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
SEC24C-204ENST00000477008 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.17
SEC24C-204ENST00000477008 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.17
SEC24C-204ENST00000477008 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.177e-7■■■■■ 29.4
SEC24C-204ENST00000477008 CHD1O14646 1710 aa13.95□□□□□ -0.18
SEC24C-204ENST00000477008 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
SEC24C-204ENST00000477008 CHMP7Q8WUX9 453 aaPredicted RBP13.89□□□□□ -0.19
SEC24C-204ENST00000477008 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
SEC24C-204ENST00000477008 TARBP1Q13395 1621 aaKnown RBP13.85□□□□□ -0.19
SEC24C-204ENST00000477008 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
SEC24C-204ENST00000477008 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
SEC24C-204ENST00000477008 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
SEC24C-204ENST00000477008 SOGA1O94964 1423 aa13.81□□□□□ -0.2
SEC24C-204ENST00000477008 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
SEC24C-204ENST00000477008 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
SEC24C-204ENST00000477008 CLASP1Q7Z460 1538 aa13.8□□□□□ -0.2
SEC24C-204ENST00000477008 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
SEC24C-204ENST00000477008 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
SEC24C-204ENST00000477008 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
SEC24C-204ENST00000477008 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
SEC24C-204ENST00000477008 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
SEC24C-204ENST00000477008 SYNJ2O15056 1496 aa13.71□□□□□ -0.21
SEC24C-204ENST00000477008 GRIN2BQ13224 1484 aa13.71□□□□□ -0.21
SEC24C-204ENST00000477008 FOXD1Q16676 465 aa13.69□□□□□ -0.22
SEC24C-204ENST00000477008 ILDR1Q86SU0 546 aaPredicted RBP13.66□□□□□ -0.22
SEC24C-204ENST00000477008 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
SEC24C-204ENST00000477008 KDM4FA0A1W2PPD8 638 aa13.55□□□□□ -0.24
SEC24C-204ENST00000477008 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
SEC24C-204ENST00000477008 FAM69CQ0P6D2 419 aa13.55□□□□□ -0.24
SEC24C-204ENST00000477008 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
SEC24C-204ENST00000477008 CUX1P39880 1505 aa13.52□□□□□ -0.25
SEC24C-204ENST00000477008 PBRM1Q86U86 1689 aa13.52□□□□□ -0.25
SEC24C-204ENST00000477008 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
SEC24C-204ENST00000477008 GRIN2AQ12879 1464 aa13.5□□□□□ -0.25
SEC24C-204ENST00000477008 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
SEC24C-204ENST00000477008 NUP160Q12769 1436 aa13.47□□□□□ -0.25
SEC24C-204ENST00000477008 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
SEC24C-204ENST00000477008 ABCC10Q5T3U5 1492 aa13.46□□□□□ -0.25
SEC24C-204ENST00000477008 JPH4Q96JJ6 628 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms