RNA–Protein interactions for RNA: ENST00000477002.1

CNTNAP3-209, Transcript of contactin associated protein like 3, humanhuman

TSL 5

Gene CNTNAP3, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-209ENST00000477002 NISCHQ9Y2I1 1504 aa44.63■■■■■ 4.73
CNTNAP3-209ENST00000477002 CCDC180Q9P1Z9 1646 aa39.9■■■■□ 3.98
CNTNAP3-209ENST00000477002 ABCC9O60706 1549 aa39.42■■■■□ 3.9
CNTNAP3-209ENST00000477002 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.64
CNTNAP3-209ENST00000477002 NACADO15069 1562 aa37.61■■■■□ 3.61
CNTNAP3-209ENST00000477002 DCAF8L2P0C7V8 631 aa37.46■■■■□ 3.59
CNTNAP3-209ENST00000477002 MYO15BQ96JP2 1530 aa37.25■■■■□ 3.55
CNTNAP3-209ENST00000477002 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.52
CNTNAP3-209ENST00000477002 DCAF1Q9Y4B6 1507 aa36.92■■■■□ 3.5
CNTNAP3-209ENST00000477002 UNC13AQ9UPW8 1703 aa36.9■■■■□ 3.5
CNTNAP3-209ENST00000477002 PABPN1Q86U42 306 aaKnown RBP eCLIP36.76■■■■□ 3.48
CNTNAP3-209ENST00000477002 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
CNTNAP3-209ENST00000477002 DNAJC5BQ9UF47 199 aa36.58■■■■□ 3.45
CNTNAP3-209ENST00000477002 SCRIBQ14160 1630 aa36.33■■■■□ 3.41
CNTNAP3-209ENST00000477002 SHROOM4Q9ULL8 1493 aa36.22■■■■□ 3.39
CNTNAP3-209ENST00000477002 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
CNTNAP3-209ENST00000477002 CC2D2AQ9P2K1 1620 aa35.65■■■■□ 3.3
CNTNAP3-209ENST00000477002 CECR2Q9BXF3 1484 aa35.48■■■■□ 3.27
CNTNAP3-209ENST00000477002 SMARCA4P51532 1647 aa34.72■■■■□ 3.15
CNTNAP3-209ENST00000477002 NCAPD3P42695 1498 aa34.7■■■■□ 3.15
CNTNAP3-209ENST00000477002 ATAD2BQ9ULI0 1458 aa34.64■■■■□ 3.14
CNTNAP3-209ENST00000477002 BAZ1AQ9NRL2 1556 aaPredicted RBP34.63■■■■□ 3.13
CNTNAP3-209ENST00000477002 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
CNTNAP3-209ENST00000477002 HMGXB3Q12766 1538 aa34.49■■■■□ 3.11
CNTNAP3-209ENST00000477002 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
CNTNAP3-209ENST00000477002 MROH2BQ7Z745 1585 aa34.36■■■■□ 3.09
CNTNAP3-209ENST00000477002 BAZ1BQ9UIG0 1483 aaKnown RBP34.34■■■■□ 3.09
CNTNAP3-209ENST00000477002 ERCC6Q03468 1493 aa34.03■■■■□ 3.04
CNTNAP3-209ENST00000477002 WIZO95785 1651 aa33.99■■■■□ 3.03
CNTNAP3-209ENST00000477002 NESP48681 1621 aa33.97■■■■□ 3.03
CNTNAP3-209ENST00000477002 LAMC3Q9Y6N6 1575 aa33.86■■■■□ 3.01
CNTNAP3-209ENST00000477002 CUX2O14529 1486 aa33.84■■■■□ 3.01
CNTNAP3-209ENST00000477002 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
CNTNAP3-209ENST00000477002 CADPSQ9ULU8 1353 aa33.66■■■□□ 2.98
CNTNAP3-209ENST00000477002 PDS5BQ9NTI5 1447 aa33.65■■■□□ 2.98
CNTNAP3-209ENST00000477002 TOP2AP11388 1531 aaKnown RBP33.6■■■□□ 2.97
CNTNAP3-209ENST00000477002 KIF21AQ7Z4S6 1674 aa33.59■■■□□ 2.97
CNTNAP3-209ENST00000477002 THOC2Q8NI27 1593 aaKnown RBP33.57■■■□□ 2.96
CNTNAP3-209ENST00000477002 CFTRP13569 1480 aa33.37■■■□□ 2.93
CNTNAP3-209ENST00000477002 DNAJC5Q9H3Z4 198 aa33.32■■■□□ 2.92
CNTNAP3-209ENST00000477002 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
CNTNAP3-209ENST00000477002 FANCD2Q9BXW9 1451 aa33.27■■■□□ 2.92
CNTNAP3-209ENST00000477002 CEP164Q9UPV0 1460 aa33.27■■■□□ 2.92
CNTNAP3-209ENST00000477002 WDR62O43379 1518 aa33.23■■■□□ 2.91
CNTNAP3-209ENST00000477002 CCDC88BA6NC98 1476 aa33.21■■■□□ 2.91
CNTNAP3-209ENST00000477002 PRDM2Q13029 1718 aa33.11■■■□□ 2.89
CNTNAP3-209ENST00000477002 URB2Q14146 1524 aaKnown RBP32.96■■■□□ 2.87
CNTNAP3-209ENST00000477002 ABCC8Q09428 1581 aa32.7■■■□□ 2.82
CNTNAP3-209ENST00000477002 TOPBP1Q92547 1522 aa32.69■■■□□ 2.82
CNTNAP3-209ENST00000477002 SUPT5HO00267 1087 aaKnown RBP32.63■■■□□ 2.81
CNTNAP3-209ENST00000477002 DNMBPQ6XZF7 1577 aa32.62■■■□□ 2.81
CNTNAP3-209ENST00000477002 IFT140Q96RY7 1462 aa32.61■■■□□ 2.81
CNTNAP3-209ENST00000477002 ZNF608Q9ULD9 1512 aaPredicted RBP32.47■■■□□ 2.79
CNTNAP3-209ENST00000477002 POLA1P09884 1462 aaPredicted RBP32.38■■■□□ 2.77
CNTNAP3-209ENST00000477002 TARBP1Q13395 1621 aaKnown RBP32.37■■■□□ 2.77
CNTNAP3-209ENST00000477002 OSCARQ8IYS5 282 aa32.37■■■□□ 2.77
CNTNAP3-209ENST00000477002 EIF4G3O43432 1585 aaKnown RBP32.34■■■□□ 2.77
CNTNAP3-209ENST00000477002 CUX1P39880 1505 aa32.26■■■□□ 2.76
CNTNAP3-209ENST00000477002 SOGA1O94964 1423 aa32.26■■■□□ 2.75
CNTNAP3-209ENST00000477002 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.75
CNTNAP3-209ENST00000477002 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
CNTNAP3-209ENST00000477002 RAD54L2Q9Y4B4 1467 aa32.23■■■□□ 2.75
CNTNAP3-209ENST00000477002 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
CNTNAP3-209ENST00000477002 TDRD9Q8NDG6 1382 aaKnown RBP32.11■■■□□ 2.73
CNTNAP3-209ENST00000477002 CHD1O14646 1710 aa32.03■■■□□ 2.72
CNTNAP3-209ENST00000477002 TRIM41Q8WV44 630 aa32.01■■■□□ 2.71
CNTNAP3-209ENST00000477002 FBLN2P98095 1184 aa31.95■■■□□ 2.71
CNTNAP3-209ENST00000477002 GRIN2BQ13224 1484 aa31.93■■■□□ 2.7
CNTNAP3-209ENST00000477002 SNAPC4Q5SXM2 1469 aa31.92■■■□□ 2.7
CNTNAP3-209ENST00000477002 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
CNTNAP3-209ENST00000477002 ABCA10Q8WWZ4 1543 aa31.91■■■□□ 2.7
CNTNAP3-209ENST00000477002 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
CNTNAP3-209ENST00000477002 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
CNTNAP3-209ENST00000477002 BIVM-ERCC5R4GMW8 1640 aa31.89■■■□□ 2.7
CNTNAP3-209ENST00000477002 RIMBP3CA6NJZ7 1639 aa31.88■■■□□ 2.69
CNTNAP3-209ENST00000477002 RIMBP3BA6NNM3 1639 aa31.88■■■□□ 2.69
CNTNAP3-209ENST00000477002 RIMBP3Q9UFD9 1639 aa31.88■■■□□ 2.69
CNTNAP3-209ENST00000477002 GAPVD1Q14C86 1478 aa31.86■■■□□ 2.69
CNTNAP3-209ENST00000477002 SYNJ1O43426 1573 aa31.85■■■□□ 2.69
CNTNAP3-209ENST00000477002 PBRM1Q86U86 1689 aa31.84■■■□□ 2.69
CNTNAP3-209ENST00000477002 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.69
CNTNAP3-209ENST00000477002 ARHGEF11O15085 1522 aa31.82■■■□□ 2.68
CNTNAP3-209ENST00000477002 CHMP7Q8WUX9 453 aaPredicted RBP31.81■■■□□ 2.68
CNTNAP3-209ENST00000477002 SYNJ2O15056 1496 aa31.78■■■□□ 2.68
CNTNAP3-209ENST00000477002 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
CNTNAP3-209ENST00000477002 CYB5RLQ6IPT4 315 aa31.56■■■□□ 2.64
CNTNAP3-209ENST00000477002 ADAMTS12P58397 1594 aa31.54■■■□□ 2.64
CNTNAP3-209ENST00000477002 ERICH3Q5RHP9 1530 aa31.53■■■□□ 2.64
CNTNAP3-209ENST00000477002 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
CNTNAP3-209ENST00000477002 GRIN2AQ12879 1464 aa31.51■■■□□ 2.63
CNTNAP3-209ENST00000477002 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
CNTNAP3-209ENST00000477002 NUP160Q12769 1436 aa31.38■■■□□ 2.61
CNTNAP3-209ENST00000477002 CEP170Q5SW79 1584 aa31.36■■■□□ 2.61
CNTNAP3-209ENST00000477002 KIF27Q86VH2 1401 aa31.29■■■□□ 2.6
CNTNAP3-209ENST00000477002 IGF1RP08069 1367 aa31.21■■■□□ 2.59
CNTNAP3-209ENST00000477002 SHROOM2Q13796 1616 aa31.21■■■□□ 2.59
CNTNAP3-209ENST00000477002 CUL7Q14999 1698 aa31.17■■■□□ 2.58
CNTNAP3-209ENST00000477002 ERCC6L2Q5T890 1561 aa31.17■■■□□ 2.58
CNTNAP3-209ENST00000477002 RUSC2Q8N2Y8 1516 aa31.08■■■□□ 2.57
CNTNAP3-209ENST00000477002 TRHP20396 242 aaPredicted RBP31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms