RNA–Protein interactions for RNA: ENST00000476998.5

ATXN10-208, Transcript of ataxin 10, humanhuman

TSL 3

Gene ATXN10, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN10-208ENST00000476998 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
ATXN10-208ENST00000476998 ABCC9O60706 1549 aa20.06■□□□□ 0.8
ATXN10-208ENST00000476998 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
ATXN10-208ENST00000476998 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
ATXN10-208ENST00000476998 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
ATXN10-208ENST00000476998 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
ATXN10-208ENST00000476998 NACADO15069 1562 aa18.87■□□□□ 0.61
ATXN10-208ENST00000476998 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
ATXN10-208ENST00000476998 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
ATXN10-208ENST00000476998 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.56
ATXN10-208ENST00000476998 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
ATXN10-208ENST00000476998 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
ATXN10-208ENST00000476998 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
ATXN10-208ENST00000476998 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
ATXN10-208ENST00000476998 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.49
ATXN10-208ENST00000476998 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
ATXN10-208ENST00000476998 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
ATXN10-208ENST00000476998 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
ATXN10-208ENST00000476998 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
ATXN10-208ENST00000476998 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
ATXN10-208ENST00000476998 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
ATXN10-208ENST00000476998 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
ATXN10-208ENST00000476998 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
ATXN10-208ENST00000476998 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
ATXN10-208ENST00000476998 NESP48681 1621 aa17.25■□□□□ 0.35
ATXN10-208ENST00000476998 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
ATXN10-208ENST00000476998 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
ATXN10-208ENST00000476998 CUX2O14529 1486 aa17.23■□□□□ 0.35
ATXN10-208ENST00000476998 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
ATXN10-208ENST00000476998 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
ATXN10-208ENST00000476998 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
ATXN10-208ENST00000476998 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
ATXN10-208ENST00000476998 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.31
ATXN10-208ENST00000476998 WIZO95785 1651 aa16.99■□□□□ 0.31
ATXN10-208ENST00000476998 KIF21AQ7Z4S6 1674 aa16.98■□□□□ 0.31
ATXN10-208ENST00000476998 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
ATXN10-208ENST00000476998 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
ATXN10-208ENST00000476998 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
ATXN10-208ENST00000476998 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
ATXN10-208ENST00000476998 WDR62O43379 1518 aa16.76■□□□□ 0.27
ATXN10-208ENST00000476998 CFTRP13569 1480 aa16.73■□□□□ 0.27
ATXN10-208ENST00000476998 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
ATXN10-208ENST00000476998 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
ATXN10-208ENST00000476998 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
ATXN10-208ENST00000476998 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
ATXN10-208ENST00000476998 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
ATXN10-208ENST00000476998 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
ATXN10-208ENST00000476998 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
ATXN10-208ENST00000476998 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
ATXN10-208ENST00000476998 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
ATXN10-208ENST00000476998 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
ATXN10-208ENST00000476998 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
ATXN10-208ENST00000476998 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
ATXN10-208ENST00000476998 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
ATXN10-208ENST00000476998 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
ATXN10-208ENST00000476998 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
ATXN10-208ENST00000476998 EIF4G3O43432 1585 aaKnown RBP16.29■□□□□ 0.2
ATXN10-208ENST00000476998 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
ATXN10-208ENST00000476998 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
ATXN10-208ENST00000476998 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
ATXN10-208ENST00000476998 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
ATXN10-208ENST00000476998 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
ATXN10-208ENST00000476998 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
ATXN10-208ENST00000476998 CHD1O14646 1710 aa16.19■□□□□ 0.18
ATXN10-208ENST00000476998 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
ATXN10-208ENST00000476998 SOGA1O94964 1423 aa16.19■□□□□ 0.18
ATXN10-208ENST00000476998 FBLN2P98095 1184 aa16.18■□□□□ 0.18
ATXN10-208ENST00000476998 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
ATXN10-208ENST00000476998 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
ATXN10-208ENST00000476998 CUX1P39880 1505 aa16.14■□□□□ 0.17
ATXN10-208ENST00000476998 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
ATXN10-208ENST00000476998 SNAPC4Q5SXM2 1469 aa16.07■□□□□ 0.16
ATXN10-208ENST00000476998 ARAP1Q96P48 1450 aa16.06■□□□□ 0.16
ATXN10-208ENST00000476998 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
ATXN10-208ENST00000476998 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
ATXN10-208ENST00000476998 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
ATXN10-208ENST00000476998 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
ATXN10-208ENST00000476998 MAGI1Q96QZ7 1491 aaPredicted RBP15.99■□□□□ 0.15
ATXN10-208ENST00000476998 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
ATXN10-208ENST00000476998 SYNJ2O15056 1496 aa15.96■□□□□ 0.14
ATXN10-208ENST00000476998 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
ATXN10-208ENST00000476998 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
ATXN10-208ENST00000476998 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
ATXN10-208ENST00000476998 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
ATXN10-208ENST00000476998 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
ATXN10-208ENST00000476998 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
ATXN10-208ENST00000476998 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
ATXN10-208ENST00000476998 TOP2BQ02880 1626 aa15.83■□□□□ 0.13
ATXN10-208ENST00000476998 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
ATXN10-208ENST00000476998 GRIN2AQ12879 1464 aa15.81■□□□□ 0.12
ATXN10-208ENST00000476998 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
ATXN10-208ENST00000476998 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
ATXN10-208ENST00000476998 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
ATXN10-208ENST00000476998 NUP160Q12769 1436 aa15.77■□□□□ 0.11
ATXN10-208ENST00000476998 FHAD1B1AJZ9 1412 aa15.75■□□□□ 0.11
ATXN10-208ENST00000476998 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
ATXN10-208ENST00000476998 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
ATXN10-208ENST00000476998 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
ATXN10-208ENST00000476998 PRG4Q92954 1404 aaPredicted RBP15.64■□□□□ 0.09
ATXN10-208ENST00000476998 IGF1RP08069 1367 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms