RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 NISCHQ9Y2I1 1504 aa22.02■■□□□ 1.12
SSX2IP-206ENST00000476905 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
SSX2IP-206ENST00000476905 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
SSX2IP-206ENST00000476905 ABCC9O60706 1549 aa19.22■□□□□ 0.67
SSX2IP-206ENST00000476905 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
SSX2IP-206ENST00000476905 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
SSX2IP-206ENST00000476905 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
SSX2IP-206ENST00000476905 NACADO15069 1562 aa18.34■□□□□ 0.53
SSX2IP-206ENST00000476905 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.52
SSX2IP-206ENST00000476905 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
SSX2IP-206ENST00000476905 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
SSX2IP-206ENST00000476905 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
SSX2IP-206ENST00000476905 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
SSX2IP-206ENST00000476905 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
SSX2IP-206ENST00000476905 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
SSX2IP-206ENST00000476905 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
SSX2IP-206ENST00000476905 SHROOM4Q9ULL8 1493 aa17.57■□□□□ 0.4
SSX2IP-206ENST00000476905 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
SSX2IP-206ENST00000476905 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
SSX2IP-206ENST00000476905 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.36
SSX2IP-206ENST00000476905 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
SSX2IP-206ENST00000476905 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
SSX2IP-206ENST00000476905 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
SSX2IP-206ENST00000476905 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.31
SSX2IP-206ENST00000476905 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
SSX2IP-206ENST00000476905 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
SSX2IP-206ENST00000476905 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
SSX2IP-206ENST00000476905 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
SSX2IP-206ENST00000476905 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
SSX2IP-206ENST00000476905 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
SSX2IP-206ENST00000476905 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
SSX2IP-206ENST00000476905 WIZO95785 1651 aa16.78■□□□□ 0.28
SSX2IP-206ENST00000476905 NESP48681 1621 aa16.67■□□□□ 0.26
SSX2IP-206ENST00000476905 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
SSX2IP-206ENST00000476905 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.23
SSX2IP-206ENST00000476905 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
SSX2IP-206ENST00000476905 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
SSX2IP-206ENST00000476905 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
SSX2IP-206ENST00000476905 CFTRP13569 1480 aa16.41■□□□□ 0.22
SSX2IP-206ENST00000476905 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
SSX2IP-206ENST00000476905 SUPT5HO00267 1087 aaKnown RBP16.38■□□□□ 0.21
SSX2IP-206ENST00000476905 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
SSX2IP-206ENST00000476905 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
SSX2IP-206ENST00000476905 CUX2O14529 1486 aa16.31■□□□□ 0.2
SSX2IP-206ENST00000476905 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
SSX2IP-206ENST00000476905 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
SSX2IP-206ENST00000476905 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
SSX2IP-206ENST00000476905 WDR62O43379 1518 aa16.19■□□□□ 0.18
SSX2IP-206ENST00000476905 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
SSX2IP-206ENST00000476905 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
SSX2IP-206ENST00000476905 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
SSX2IP-206ENST00000476905 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
SSX2IP-206ENST00000476905 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
SSX2IP-206ENST00000476905 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
SSX2IP-206ENST00000476905 CUX1P39880 1505 aa15.95■□□□□ 0.14
SSX2IP-206ENST00000476905 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
SSX2IP-206ENST00000476905 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
SSX2IP-206ENST00000476905 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
SSX2IP-206ENST00000476905 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
SSX2IP-206ENST00000476905 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
SSX2IP-206ENST00000476905 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
SSX2IP-206ENST00000476905 FGD5Q6ZNL6 1462 aa15.87■□□□□ 0.13
SSX2IP-206ENST00000476905 SOGA1O94964 1423 aa15.85■□□□□ 0.13
SSX2IP-206ENST00000476905 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
SSX2IP-206ENST00000476905 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■■■□□ 15
SSX2IP-206ENST00000476905 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
SSX2IP-206ENST00000476905 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
SSX2IP-206ENST00000476905 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
SSX2IP-206ENST00000476905 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.12
SSX2IP-206ENST00000476905 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
SSX2IP-206ENST00000476905 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
SSX2IP-206ENST00000476905 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
SSX2IP-206ENST00000476905 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
SSX2IP-206ENST00000476905 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
SSX2IP-206ENST00000476905 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
SSX2IP-206ENST00000476905 SNAPC4Q5SXM2 1469 aa15.64■□□□□ 0.09
SSX2IP-206ENST00000476905 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
SSX2IP-206ENST00000476905 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
SSX2IP-206ENST00000476905 FBLN2P98095 1184 aa15.61■□□□□ 0.09
SSX2IP-206ENST00000476905 MAGI1Q96QZ7 1491 aaPredicted RBP15.57■□□□□ 0.08
SSX2IP-206ENST00000476905 CHD1O14646 1710 aa15.55■□□□□ 0.08
SSX2IP-206ENST00000476905 CHMP7Q8WUX9 453 aaPredicted RBP15.55■□□□□ 0.08
SSX2IP-206ENST00000476905 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
SSX2IP-206ENST00000476905 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
SSX2IP-206ENST00000476905 IGF1RP08069 1367 aa15.49■□□□□ 0.07
SSX2IP-206ENST00000476905 KCNA4P22459 653 aa15.48■□□□□ 0.07
SSX2IP-206ENST00000476905 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
SSX2IP-206ENST00000476905 ADAMTS12P58397 1594 aa15.46■□□□□ 0.06
SSX2IP-206ENST00000476905 FHAD1B1AJZ9 1412 aa15.45■□□□□ 0.06
SSX2IP-206ENST00000476905 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
SSX2IP-206ENST00000476905 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
SSX2IP-206ENST00000476905 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
SSX2IP-206ENST00000476905 RUSC2Q8N2Y8 1516 aa15.44■□□□□ 0.06
SSX2IP-206ENST00000476905 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
SSX2IP-206ENST00000476905 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
SSX2IP-206ENST00000476905 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
SSX2IP-206ENST00000476905 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
SSX2IP-206ENST00000476905 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
SSX2IP-206ENST00000476905 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
SSX2IP-206ENST00000476905 NUP160Q12769 1436 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms