RNA–Protein interactions for RNA: ENST00000476901.1

TRMU-211, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 1 (best)

Gene TRMU, Length 1,476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-211ENST00000476901 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
TRMU-211ENST00000476901 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
TRMU-211ENST00000476901 ABCC9O60706 1549 aa31.68■■■□□ 2.66
TRMU-211ENST00000476901 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.63
TRMU-211ENST00000476901 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
TRMU-211ENST00000476901 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
TRMU-211ENST00000476901 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
TRMU-211ENST00000476901 NACADO15069 1562 aa30.79■■■□□ 2.52
TRMU-211ENST00000476901 RB1CC1Q8TDY2 1594 aa30.61■■■□□ 2.49
TRMU-211ENST00000476901 SHROOM4Q9ULL8 1493 aa30.27■■■□□ 2.44
TRMU-211ENST00000476901 SCRIBQ14160 1630 aa30.17■■■□□ 2.42
TRMU-211ENST00000476901 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
TRMU-211ENST00000476901 PABPN1Q86U42 306 aaKnown RBP eCLIP29.7■■■□□ 2.35
TRMU-211ENST00000476901 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
TRMU-211ENST00000476901 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
TRMU-211ENST00000476901 CECR2Q9BXF3 1484 aa29.09■■■□□ 2.25
TRMU-211ENST00000476901 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
TRMU-211ENST00000476901 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
TRMU-211ENST00000476901 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
TRMU-211ENST00000476901 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
TRMU-211ENST00000476901 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
TRMU-211ENST00000476901 EIF4G1Q04637 1599 aaKnown RBP28.76■■■□□ 2.19
TRMU-211ENST00000476901 WIZO95785 1651 aa28.66■■■□□ 2.18
TRMU-211ENST00000476901 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
TRMU-211ENST00000476901 CC2D2AQ9P2K1 1620 aa28.6■■■□□ 2.17
TRMU-211ENST00000476901 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
TRMU-211ENST00000476901 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
TRMU-211ENST00000476901 TOP2AP11388 1531 aaKnown RBP28.45■■■□□ 2.14
TRMU-211ENST00000476901 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.14
TRMU-211ENST00000476901 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
TRMU-211ENST00000476901 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
TRMU-211ENST00000476901 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
TRMU-211ENST00000476901 CFTRP13569 1480 aa27.63■■■□□ 2.01
TRMU-211ENST00000476901 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
TRMU-211ENST00000476901 CHIC1Q5VXU3 224 aa27.54■■■□□ 2
TRMU-211ENST00000476901 LAMC3Q9Y6N6 1575 aa27.51■■□□□ 1.99
TRMU-211ENST00000476901 PRDM2Q13029 1718 aa27.51■■□□□ 1.99
TRMU-211ENST00000476901 NESP48681 1621 aa27.43■■□□□ 1.98
TRMU-211ENST00000476901 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
TRMU-211ENST00000476901 ABCC8Q09428 1581 aa27.34■■□□□ 1.97
TRMU-211ENST00000476901 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
TRMU-211ENST00000476901 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
TRMU-211ENST00000476901 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
TRMU-211ENST00000476901 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
TRMU-211ENST00000476901 CEP164Q9UPV0 1460 aa27.21■■□□□ 1.95
TRMU-211ENST00000476901 SYNJ1O43426 1573 aa27.14■■□□□ 1.93
TRMU-211ENST00000476901 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
TRMU-211ENST00000476901 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
TRMU-211ENST00000476901 BIVM-ERCC5R4GMW8 1640 aa27.1■■□□□ 1.93
TRMU-211ENST00000476901 CUX1P39880 1505 aa27.09■■□□□ 1.93
TRMU-211ENST00000476901 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
TRMU-211ENST00000476901 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
TRMU-211ENST00000476901 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
TRMU-211ENST00000476901 URB2Q14146 1524 aaKnown RBP26.94■■□□□ 1.9
TRMU-211ENST00000476901 CUX2O14529 1486 aa26.91■■□□□ 1.9
TRMU-211ENST00000476901 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
TRMU-211ENST00000476901 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
TRMU-211ENST00000476901 EEA1Q15075 1411 aa26.81■■□□□ 1.88
TRMU-211ENST00000476901 WDR62O43379 1518 aa26.81■■□□□ 1.88
TRMU-211ENST00000476901 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
TRMU-211ENST00000476901 SOGA1O94964 1423 aa26.76■■□□□ 1.87
TRMU-211ENST00000476901 FAM9AQ8IZU1 332 aaPredicted RBP26.75■■□□□ 1.87
TRMU-211ENST00000476901 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
TRMU-211ENST00000476901 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
TRMU-211ENST00000476901 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
TRMU-211ENST00000476901 RUSC2Q8N2Y8 1516 aa26.63■■□□□ 1.85
TRMU-211ENST00000476901 CSRNP3Q8WYN3 585 aa26.61■■□□□ 1.85
TRMU-211ENST00000476901 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
TRMU-211ENST00000476901 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
TRMU-211ENST00000476901 TARBP1Q13395 1621 aaKnown RBP26.56■■□□□ 1.84
TRMU-211ENST00000476901 ABCA5Q8WWZ7 1642 aa26.45■■□□□ 1.82
TRMU-211ENST00000476901 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
TRMU-211ENST00000476901 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
TRMU-211ENST00000476901 KIF21BO75037 1637 aa26.42■■□□□ 1.82
TRMU-211ENST00000476901 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
TRMU-211ENST00000476901 IGF1RP08069 1367 aa26.39■■□□□ 1.82
TRMU-211ENST00000476901 GOLGA3Q08378 1498 aa26.38■■□□□ 1.81
TRMU-211ENST00000476901 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
TRMU-211ENST00000476901 PRXQ9BXM0 1461 aa26.35■■□□□ 1.81
TRMU-211ENST00000476901 EHMT2Q96KQ7 1210 aa26.34■■□□□ 1.81
TRMU-211ENST00000476901 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
TRMU-211ENST00000476901 CUL7Q14999 1698 aa26.33■■□□□ 1.8
TRMU-211ENST00000476901 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.8
TRMU-211ENST00000476901 GRIN2BQ13224 1484 aa26.31■■□□□ 1.8
TRMU-211ENST00000476901 EIF4G3O43432 1585 aaKnown RBP26.3■■□□□ 1.8
TRMU-211ENST00000476901 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
TRMU-211ENST00000476901 CARMIL1Q5VZK9 1371 aa26.3■■□□□ 1.8
TRMU-211ENST00000476901 RAPGEF2Q9Y4G8 1499 aa26.26■■□□□ 1.79
TRMU-211ENST00000476901 UBTFP17480 764 aaKnown RBP26.25■■□□□ 1.79
TRMU-211ENST00000476901 TNIKQ9UKE5 1360 aa26.19■■□□□ 1.78
TRMU-211ENST00000476901 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
TRMU-211ENST00000476901 MAGI1Q96QZ7 1491 aaPredicted RBP26.14■■□□□ 1.78
TRMU-211ENST00000476901 ADAMTS12P58397 1594 aa26.14■■□□□ 1.78
TRMU-211ENST00000476901 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.77
TRMU-211ENST00000476901 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
TRMU-211ENST00000476901 SYNJ2O15056 1496 aa26.02■■□□□ 1.76
TRMU-211ENST00000476901 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
TRMU-211ENST00000476901 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
TRMU-211ENST00000476901 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
TRMU-211ENST00000476901 CTTNBP2Q8WZ74 1663 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms