RNA–Protein interactions for RNA: ENST00000476828.2

AMT-213, Transcript of aminomethyltransferase, humanhuman

TSL 3

Gene AMT, Length 1,872 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-213ENST00000476828 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.28
AMT-213ENST00000476828 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
AMT-213ENST00000476828 ABCC9O60706 1549 aa30.1■■■□□ 2.41
AMT-213ENST00000476828 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
AMT-213ENST00000476828 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
AMT-213ENST00000476828 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
AMT-213ENST00000476828 NACADO15069 1562 aa29.3■■■□□ 2.28
AMT-213ENST00000476828 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
AMT-213ENST00000476828 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.26
AMT-213ENST00000476828 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
AMT-213ENST00000476828 UNC13AQ9UPW8 1703 aa28.68■■■□□ 2.18
AMT-213ENST00000476828 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
AMT-213ENST00000476828 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
AMT-213ENST00000476828 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.113e-6■■■■□ 23.3
AMT-213ENST00000476828 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
AMT-213ENST00000476828 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
AMT-213ENST00000476828 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
AMT-213ENST00000476828 SMARCA4P51532 1647 aa27.5■■□□□ 1.99
AMT-213ENST00000476828 MROH2BQ7Z745 1585 aa27.45■■□□□ 1.99
AMT-213ENST00000476828 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.97
AMT-213ENST00000476828 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
AMT-213ENST00000476828 WIZO95785 1651 aa27.23■■□□□ 1.95
AMT-213ENST00000476828 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
AMT-213ENST00000476828 ATAD2BQ9ULI0 1458 aa27.14■■□□□ 1.94
AMT-213ENST00000476828 SMARCA2P51531 1590 aa27.14■■□□□ 1.94
AMT-213ENST00000476828 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
AMT-213ENST00000476828 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
AMT-213ENST00000476828 NCAPD3P42695 1498 aa27.02■■□□□ 1.92
AMT-213ENST00000476828 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
AMT-213ENST00000476828 BAZ1BQ9UIG0 1483 aaKnown RBP26.96■■□□□ 1.91
AMT-213ENST00000476828 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
AMT-213ENST00000476828 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
AMT-213ENST00000476828 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
AMT-213ENST00000476828 CFTRP13569 1480 aa26.25■■□□□ 1.79
AMT-213ENST00000476828 NESP48681 1621 aa26.25■■□□□ 1.79
AMT-213ENST00000476828 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
AMT-213ENST00000476828 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
AMT-213ENST00000476828 KIF21AQ7Z4S6 1674 aa26.01■■□□□ 1.75
AMT-213ENST00000476828 PDS5BQ9NTI5 1447 aa25.99■■□□□ 1.75
AMT-213ENST00000476828 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
AMT-213ENST00000476828 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.74
AMT-213ENST00000476828 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
AMT-213ENST00000476828 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
AMT-213ENST00000476828 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
AMT-213ENST00000476828 THOC2Q8NI27 1593 aaKnown RBP25.72■■□□□ 1.71
AMT-213ENST00000476828 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
AMT-213ENST00000476828 CUX1P39880 1505 aa25.71■■□□□ 1.71
AMT-213ENST00000476828 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
AMT-213ENST00000476828 SYNJ1O43426 1573 aa25.71■■□□□ 1.71
AMT-213ENST00000476828 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
AMT-213ENST00000476828 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
AMT-213ENST00000476828 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
AMT-213ENST00000476828 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
AMT-213ENST00000476828 TOP2BQ02880 1626 aa25.65■■□□□ 1.7
AMT-213ENST00000476828 WDR62O43379 1518 aa25.63■■□□□ 1.69
AMT-213ENST00000476828 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
AMT-213ENST00000476828 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
AMT-213ENST00000476828 POLA1P09884 1462 aaPredicted RBP25.48■■□□□ 1.67
AMT-213ENST00000476828 CUX2O14529 1486 aa25.4■■□□□ 1.66
AMT-213ENST00000476828 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
AMT-213ENST00000476828 TARBP1Q13395 1621 aaKnown RBP25.36■■□□□ 1.65
AMT-213ENST00000476828 SOGA1O94964 1423 aa25.35■■□□□ 1.65
AMT-213ENST00000476828 WDR97A6NE52 1622 aa25.33■■□□□ 1.65
AMT-213ENST00000476828 IFT140Q96RY7 1462 aa25.3■■□□□ 1.64
AMT-213ENST00000476828 ABCA10Q8WWZ4 1543 aa25.28■■□□□ 1.64
AMT-213ENST00000476828 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
AMT-213ENST00000476828 RUSC2Q8N2Y8 1516 aa25.17■■□□□ 1.62
AMT-213ENST00000476828 ABCA5Q8WWZ7 1642 aa25.17■■□□□ 1.62
AMT-213ENST00000476828 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
AMT-213ENST00000476828 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
AMT-213ENST00000476828 KIF27Q86VH2 1401 aa25.13■■□□□ 1.61
AMT-213ENST00000476828 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.618e-7■■■■□ 24.7
AMT-213ENST00000476828 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
AMT-213ENST00000476828 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
AMT-213ENST00000476828 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
AMT-213ENST00000476828 EEA1Q15075 1411 aa25.05■■□□□ 1.6
AMT-213ENST00000476828 GRIN2BQ13224 1484 aa24.99■■□□□ 1.59
AMT-213ENST00000476828 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
AMT-213ENST00000476828 IGF1RP08069 1367 aa24.96■■□□□ 1.59
AMT-213ENST00000476828 CSRNP3Q8WYN3 585 aa24.94■■□□□ 1.58
AMT-213ENST00000476828 CUL7Q14999 1698 aa24.91■■□□□ 1.58
AMT-213ENST00000476828 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
AMT-213ENST00000476828 ADAMTS12P58397 1594 aa24.88■■□□□ 1.57
AMT-213ENST00000476828 MAGI1Q96QZ7 1491 aaPredicted RBP24.86■■□□□ 1.57
AMT-213ENST00000476828 PRXQ9BXM0 1461 aa24.83■■□□□ 1.57
AMT-213ENST00000476828 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
AMT-213ENST00000476828 KIF21BO75037 1637 aa24.81■■□□□ 1.56
AMT-213ENST00000476828 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
AMT-213ENST00000476828 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
AMT-213ENST00000476828 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
AMT-213ENST00000476828 CHD1O14646 1710 aa24.75■■□□□ 1.55
AMT-213ENST00000476828 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
AMT-213ENST00000476828 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
AMT-213ENST00000476828 GRIN2AQ12879 1464 aa24.69■■□□□ 1.54
AMT-213ENST00000476828 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
AMT-213ENST00000476828 FBLN2P98095 1184 aa24.67■■□□□ 1.54
AMT-213ENST00000476828 LOC105371045A0A1W2PR82 267 aa24.64■■□□□ 1.53
AMT-213ENST00000476828 CTTNBP2Q8WZ74 1663 aa24.59■■□□□ 1.53
AMT-213ENST00000476828 CEP170Q5SW79 1584 aa24.58■■□□□ 1.53
AMT-213ENST00000476828 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 629.5 ms