RNA–Protein interactions for RNA: ENST00000476803.1

FAAP20-212, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-212ENST00000476803 NISCHQ9Y2I1 1504 aa44.68■■■■■ 4.74
FAAP20-212ENST00000476803 CCDC180Q9P1Z9 1646 aa39.76■■■■□ 3.96
FAAP20-212ENST00000476803 ABCC9O60706 1549 aa39.17■■■■□ 3.86
FAAP20-212ENST00000476803 RB1CC1Q8TDY2 1594 aa37.58■■■■□ 3.61
FAAP20-212ENST00000476803 NACADO15069 1562 aa37.49■■■■□ 3.59
FAAP20-212ENST00000476803 DCAF8L2P0C7V8 631 aa37.46■■■■□ 3.59
FAAP20-212ENST00000476803 MYO15BQ96JP2 1530 aa37.21■■■■□ 3.55
FAAP20-212ENST00000476803 ZCCHC6Q5VYS8 1495 aaKnown RBP37.17■■■■□ 3.54
FAAP20-212ENST00000476803 DCAF1Q9Y4B6 1507 aa36.96■■■■□ 3.51
FAAP20-212ENST00000476803 PABPN1Q86U42 306 aaKnown RBP eCLIP36.59■■■■□ 3.45
FAAP20-212ENST00000476803 UNC13AQ9UPW8 1703 aa36.59■■■■□ 3.45
FAAP20-212ENST00000476803 BICRAQ9NZM4 1560 aa36.41■■■■□ 3.42
FAAP20-212ENST00000476803 SCRIBQ14160 1630 aa36.29■■■■□ 3.4
FAAP20-212ENST00000476803 DNAJC5BQ9UF47 199 aa36.14■■■■□ 3.38
FAAP20-212ENST00000476803 SHROOM4Q9ULL8 1493 aa36.08■■■■□ 3.37
FAAP20-212ENST00000476803 EIF4G1Q04637 1599 aaKnown RBP35.5■■■■□ 3.27
FAAP20-212ENST00000476803 CC2D2AQ9P2K1 1620 aa35.39■■■■□ 3.26
FAAP20-212ENST00000476803 CECR2Q9BXF3 1484 aa35.23■■■■□ 3.23
FAAP20-212ENST00000476803 SMARCA4P51532 1647 aa34.69■■■■□ 3.14
FAAP20-212ENST00000476803 BAZ1AQ9NRL2 1556 aaPredicted RBP34.65■■■■□ 3.14
FAAP20-212ENST00000476803 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
FAAP20-212ENST00000476803 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
FAAP20-212ENST00000476803 SMARCA2P51531 1590 aa34.53■■■■□ 3.12
FAAP20-212ENST00000476803 MROH2BQ7Z745 1585 aa34.41■■■■□ 3.1
FAAP20-212ENST00000476803 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
FAAP20-212ENST00000476803 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
FAAP20-212ENST00000476803 BAZ1BQ9UIG0 1483 aaKnown RBP34.3■■■■□ 3.08
FAAP20-212ENST00000476803 WIZO95785 1651 aa33.99■■■■□ 3.03
FAAP20-212ENST00000476803 RSF1Q96T23 1441 aaPredicted RBP33.97■■■■□ 3.03
FAAP20-212ENST00000476803 NESP48681 1621 aa33.82■■■■□ 3
FAAP20-212ENST00000476803 ERCC6Q03468 1493 aa33.82■■■■□ 3
FAAP20-212ENST00000476803 LAMC3Q9Y6N6 1575 aa33.71■■■□□ 2.99
FAAP20-212ENST00000476803 TOP2AP11388 1531 aaKnown RBP33.67■■■□□ 2.98
FAAP20-212ENST00000476803 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
FAAP20-212ENST00000476803 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
FAAP20-212ENST00000476803 CUX2O14529 1486 aa33.52■■■□□ 2.96
FAAP20-212ENST00000476803 CFTRP13569 1480 aa33.35■■■□□ 2.93
FAAP20-212ENST00000476803 KIF21AQ7Z4S6 1674 aa33.34■■■□□ 2.93
FAAP20-212ENST00000476803 THOC2Q8NI27 1593 aaKnown RBP33.33■■■□□ 2.93
FAAP20-212ENST00000476803 CCDC88BA6NC98 1476 aa33.28■■■□□ 2.92
FAAP20-212ENST00000476803 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
FAAP20-212ENST00000476803 CEP164Q9UPV0 1460 aa33.19■■■□□ 2.9
FAAP20-212ENST00000476803 MRC2Q9UBG0 1479 aa33.18■■■□□ 2.9
FAAP20-212ENST00000476803 WDR62O43379 1518 aa33.06■■■□□ 2.88
FAAP20-212ENST00000476803 SUPT5HO00267 1087 aaKnown RBP32.97■■■□□ 2.87
FAAP20-212ENST00000476803 PRDM2Q13029 1718 aa32.94■■■□□ 2.86
FAAP20-212ENST00000476803 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
FAAP20-212ENST00000476803 DNAJC5Q9H3Z4 198 aa32.76■■■□□ 2.83
FAAP20-212ENST00000476803 ABCC8Q09428 1581 aa32.65■■■□□ 2.82
FAAP20-212ENST00000476803 TOPBP1Q92547 1522 aa32.64■■■□□ 2.82
FAAP20-212ENST00000476803 DNMBPQ6XZF7 1577 aa32.58■■■□□ 2.81
FAAP20-212ENST00000476803 IFT140Q96RY7 1462 aa32.52■■■□□ 2.8
FAAP20-212ENST00000476803 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
FAAP20-212ENST00000476803 POLA1P09884 1462 aaPredicted RBP32.35■■■□□ 2.77
FAAP20-212ENST00000476803 CUX1P39880 1505 aa32.3■■■□□ 2.76
FAAP20-212ENST00000476803 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.76
FAAP20-212ENST00000476803 FGD5Q6ZNL6 1462 aa32.24■■■□□ 2.75
FAAP20-212ENST00000476803 SOGA1O94964 1423 aa32.24■■■□□ 2.75
FAAP20-212ENST00000476803 RAD54L2Q9Y4B4 1467 aa32.21■■■□□ 2.75
FAAP20-212ENST00000476803 EIF4G3O43432 1585 aaKnown RBP32.19■■■□□ 2.74
FAAP20-212ENST00000476803 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.742e-6■■□□□ 13.2
FAAP20-212ENST00000476803 OSCARQ8IYS5 282 aa32.12■■■□□ 2.73
FAAP20-212ENST00000476803 TDRD9Q8NDG6 1382 aaKnown RBP32.08■■■□□ 2.73
FAAP20-212ENST00000476803 WRNQ14191 1432 aaPredicted RBP eCLIP32.06■■■□□ 2.72
FAAP20-212ENST00000476803 WDR97A6NE52 1622 aa32.03■■■□□ 2.72
FAAP20-212ENST00000476803 TOP2BQ02880 1626 aa31.96■■■□□ 2.71
FAAP20-212ENST00000476803 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
FAAP20-212ENST00000476803 SYNJ1O43426 1573 aa31.93■■■□□ 2.7
FAAP20-212ENST00000476803 BIVM-ERCC5R4GMW8 1640 aa31.93■■■□□ 2.7
FAAP20-212ENST00000476803 GRIN2BQ13224 1484 aa31.89■■■□□ 2.7
FAAP20-212ENST00000476803 SNAPC4Q5SXM2 1469 aa31.86■■■□□ 2.69
FAAP20-212ENST00000476803 FBLN2P98095 1184 aa31.85■■■□□ 2.69
FAAP20-212ENST00000476803 GAPVD1Q14C86 1478 aa31.84■■■□□ 2.69
FAAP20-212ENST00000476803 MAGI1Q96QZ7 1491 aaPredicted RBP31.83■■■□□ 2.69
FAAP20-212ENST00000476803 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
FAAP20-212ENST00000476803 CHD1O14646 1710 aa31.78■■■□□ 2.68
FAAP20-212ENST00000476803 CHMP7Q8WUX9 453 aaPredicted RBP31.74■■■□□ 2.67
FAAP20-212ENST00000476803 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
FAAP20-212ENST00000476803 PBRM1Q86U86 1689 aa31.7■■■□□ 2.67
FAAP20-212ENST00000476803 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
FAAP20-212ENST00000476803 ARHGEF11O15085 1522 aa31.55■■■□□ 2.64
FAAP20-212ENST00000476803 RIMBP3CA6NJZ7 1639 aa31.55■■■□□ 2.64
FAAP20-212ENST00000476803 RIMBP3BA6NNM3 1639 aa31.55■■■□□ 2.64
FAAP20-212ENST00000476803 RIMBP3Q9UFD9 1639 aa31.55■■■□□ 2.64
FAAP20-212ENST00000476803 ERICH3Q5RHP9 1530 aa31.54■■■□□ 2.64
FAAP20-212ENST00000476803 ADAMTS12P58397 1594 aa31.51■■■□□ 2.63
FAAP20-212ENST00000476803 CLASP1Q7Z460 1538 aa31.5■■■□□ 2.63
FAAP20-212ENST00000476803 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
FAAP20-212ENST00000476803 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
FAAP20-212ENST00000476803 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
FAAP20-212ENST00000476803 NUP160Q12769 1436 aa31.33■■■□□ 2.61
FAAP20-212ENST00000476803 CYB5RLQ6IPT4 315 aa31.31■■■□□ 2.6
FAAP20-212ENST00000476803 IGF1RP08069 1367 aa31.3■■■□□ 2.6
FAAP20-212ENST00000476803 ARAP1Q96P48 1450 aa31.29■■■□□ 2.6
FAAP20-212ENST00000476803 CEP170Q5SW79 1584 aa31.29■■■□□ 2.6
FAAP20-212ENST00000476803 CUL7Q14999 1698 aa31.19■■■□□ 2.58
FAAP20-212ENST00000476803 CARMIL1Q5VZK9 1371 aa31.11■■■□□ 2.57
FAAP20-212ENST00000476803 SHROOM2Q13796 1616 aa31.08■■■□□ 2.57
FAAP20-212ENST00000476803 RUSC2Q8N2Y8 1516 aa31.04■■■□□ 2.56
FAAP20-212ENST00000476803 JPH4Q96JJ6 628 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms