RNA–Protein interactions for RNA: ENST00000476787.1

PQLC3-208, Transcript of PQ loop repeat containing 3, humanhuman

TSL 3

Gene PQLC3, Length 469 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PQLC3-208ENST00000476787 NISCHQ9Y2I1 1504 aa47.7■■■■■ 5.23
PQLC3-208ENST00000476787 CCDC180Q9P1Z9 1646 aa42.59■■■■■ 4.41
PQLC3-208ENST00000476787 ABCC9O60706 1549 aa42■■■■■ 4.31
PQLC3-208ENST00000476787 RB1CC1Q8TDY2 1594 aa40.28■■■■■ 4.04
PQLC3-208ENST00000476787 NACADO15069 1562 aa40.14■■■■■ 4.02
PQLC3-208ENST00000476787 DCAF8L2P0C7V8 631 aa40.01■■■■■ 4
PQLC3-208ENST00000476787 MYO15BQ96JP2 1530 aa39.81■■■■□ 3.96
PQLC3-208ENST00000476787 ZCCHC6Q5VYS8 1495 aaKnown RBP39.65■■■■□ 3.94
PQLC3-208ENST00000476787 DCAF1Q9Y4B6 1507 aa39.48■■■■□ 3.91
PQLC3-208ENST00000476787 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
PQLC3-208ENST00000476787 PABPN1Q86U42 306 aaKnown RBP eCLIP39.18■■■■□ 3.86
PQLC3-208ENST00000476787 BICRAQ9NZM4 1560 aa39.02■■■■□ 3.84
PQLC3-208ENST00000476787 DNAJC5BQ9UF47 199 aa38.85■■■■□ 3.81
PQLC3-208ENST00000476787 SCRIBQ14160 1630 aa38.79■■■■□ 3.8
PQLC3-208ENST00000476787 SHROOM4Q9ULL8 1493 aa38.67■■■■□ 3.78
PQLC3-208ENST00000476787 EIF4G1Q04637 1599 aaKnown RBP38.06■■■■□ 3.68
PQLC3-208ENST00000476787 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
PQLC3-208ENST00000476787 CECR2Q9BXF3 1484 aa37.8■■■■□ 3.64
PQLC3-208ENST00000476787 SMARCA4P51532 1647 aa37.09■■■■□ 3.53
PQLC3-208ENST00000476787 NCAPD3P42695 1498 aa37.04■■■■□ 3.52
PQLC3-208ENST00000476787 BAZ1AQ9NRL2 1556 aaPredicted RBP37.02■■■■□ 3.52
PQLC3-208ENST00000476787 ATAD2BQ9ULI0 1458 aa36.99■■■■□ 3.51
PQLC3-208ENST00000476787 SMARCA2P51531 1590 aa36.95■■■■□ 3.51
PQLC3-208ENST00000476787 HMGXB3Q12766 1538 aa36.83■■■■□ 3.49
PQLC3-208ENST00000476787 PEG3Q9GZU2 1588 aa36.74■■■■□ 3.47
PQLC3-208ENST00000476787 MROH2BQ7Z745 1585 aa36.73■■■■□ 3.47
PQLC3-208ENST00000476787 BAZ1BQ9UIG0 1483 aaKnown RBP36.68■■■■□ 3.46
PQLC3-208ENST00000476787 WIZO95785 1651 aa36.3■■■■□ 3.4
PQLC3-208ENST00000476787 ERCC6Q03468 1493 aa36.27■■■■□ 3.4
PQLC3-208ENST00000476787 NESP48681 1621 aa36.21■■■■□ 3.39
PQLC3-208ENST00000476787 RSF1Q96T23 1441 aaPredicted RBP36.19■■■■□ 3.38
PQLC3-208ENST00000476787 LAMC3Q9Y6N6 1575 aa36.13■■■■□ 3.37
PQLC3-208ENST00000476787 CUX2O14529 1486 aa36.04■■■■□ 3.36
PQLC3-208ENST00000476787 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
PQLC3-208ENST00000476787 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
PQLC3-208ENST00000476787 PDS5BQ9NTI5 1447 aa35.92■■■■□ 3.34
PQLC3-208ENST00000476787 KIF21AQ7Z4S6 1674 aa35.78■■■■□ 3.32
PQLC3-208ENST00000476787 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.32
PQLC3-208ENST00000476787 CFTRP13569 1480 aa35.65■■■■□ 3.3
PQLC3-208ENST00000476787 MRC2Q9UBG0 1479 aa35.54■■■■□ 3.28
PQLC3-208ENST00000476787 CEP164Q9UPV0 1460 aa35.53■■■■□ 3.28
PQLC3-208ENST00000476787 FANCD2Q9BXW9 1451 aa35.52■■■■□ 3.28
PQLC3-208ENST00000476787 CCDC88BA6NC98 1476 aa35.5■■■■□ 3.27
PQLC3-208ENST00000476787 WDR62O43379 1518 aa35.44■■■■□ 3.26
PQLC3-208ENST00000476787 DNAJC5Q9H3Z4 198 aa35.35■■■■□ 3.25
PQLC3-208ENST00000476787 PRDM2Q13029 1718 aa35.32■■■■□ 3.25
PQLC3-208ENST00000476787 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
PQLC3-208ENST00000476787 SUPT5HO00267 1087 aaKnown RBP34.99■■■■□ 3.19
PQLC3-208ENST00000476787 ABCC8Q09428 1581 aa34.94■■■■□ 3.18
PQLC3-208ENST00000476787 TOPBP1Q92547 1522 aa34.9■■■■□ 3.18
PQLC3-208ENST00000476787 DNMBPQ6XZF7 1577 aa34.84■■■■□ 3.17
PQLC3-208ENST00000476787 IFT140Q96RY7 1462 aa34.81■■■■□ 3.16
PQLC3-208ENST00000476787 ZNF608Q9ULD9 1512 aaPredicted RBP34.63■■■■□ 3.13
PQLC3-208ENST00000476787 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
PQLC3-208ENST00000476787 TARBP1Q13395 1621 aaKnown RBP34.54■■■■□ 3.12
PQLC3-208ENST00000476787 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
PQLC3-208ENST00000476787 OSCARQ8IYS5 282 aa34.48■■■■□ 3.11
PQLC3-208ENST00000476787 CUX1P39880 1505 aa34.48■■■■□ 3.11
PQLC3-208ENST00000476787 SOGA1O94964 1423 aa34.45■■■■□ 3.11
PQLC3-208ENST00000476787 FGD5Q6ZNL6 1462 aa34.44■■■■□ 3.1
PQLC3-208ENST00000476787 RAD54L2Q9Y4B4 1467 aa34.41■■■■□ 3.1
PQLC3-208ENST00000476787 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.1
PQLC3-208ENST00000476787 WDR97A6NE52 1622 aa34.31■■■■□ 3.08
PQLC3-208ENST00000476787 TDRD9Q8NDG6 1382 aaKnown RBP34.28■■■■□ 3.08
PQLC3-208ENST00000476787 WRNQ14191 1432 aaPredicted RBP eCLIP34.16■■■■□ 3.06
PQLC3-208ENST00000476787 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
PQLC3-208ENST00000476787 CHD1O14646 1710 aa34.11■■■■□ 3.05
PQLC3-208ENST00000476787 ABCA10Q8WWZ4 1543 aa34.1■■■■□ 3.05
PQLC3-208ENST00000476787 GRIN2BQ13224 1484 aa34.1■■■■□ 3.05
PQLC3-208ENST00000476787 BIVM-ERCC5R4GMW8 1640 aa34.1■■■■□ 3.05
PQLC3-208ENST00000476787 FBLN2P98095 1184 aa34.09■■■■□ 3.05
PQLC3-208ENST00000476787 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
PQLC3-208ENST00000476787 MAGI1Q96QZ7 1491 aaPredicted RBP34.06■■■■□ 3.04
PQLC3-208ENST00000476787 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
PQLC3-208ENST00000476787 GAPVD1Q14C86 1478 aa34.05■■■■□ 3.04
PQLC3-208ENST00000476787 TRIM41Q8WV44 630 aa34■■■■□ 3.03
PQLC3-208ENST00000476787 ABCA5Q8WWZ7 1642 aa33.98■■■■□ 3.03
PQLC3-208ENST00000476787 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
PQLC3-208ENST00000476787 CHMP7Q8WUX9 453 aaPredicted RBP33.96■■■■□ 3.03
PQLC3-208ENST00000476787 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
PQLC3-208ENST00000476787 RIMBP3CA6NJZ7 1639 aa33.91■■■■□ 3.02
PQLC3-208ENST00000476787 RIMBP3BA6NNM3 1639 aa33.91■■■■□ 3.02
PQLC3-208ENST00000476787 RIMBP3Q9UFD9 1639 aa33.91■■■■□ 3.02
PQLC3-208ENST00000476787 ARHGEF11O15085 1522 aa33.89■■■■□ 3.02
PQLC3-208ENST00000476787 CLASP1Q7Z460 1538 aa33.75■■■□□ 2.99
PQLC3-208ENST00000476787 ERICH3Q5RHP9 1530 aa33.7■■■□□ 2.99
PQLC3-208ENST00000476787 ADAMTS12P58397 1594 aa33.69■■■□□ 2.98
PQLC3-208ENST00000476787 GRIN2AQ12879 1464 aa33.65■■■□□ 2.98
PQLC3-208ENST00000476787 FHAD1B1AJZ9 1412 aa33.65■■■□□ 2.98
PQLC3-208ENST00000476787 CYB5RLQ6IPT4 315 aa33.6■■■□□ 2.97
PQLC3-208ENST00000476787 ARAP1Q96P48 1450 aa33.57■■■□□ 2.97
PQLC3-208ENST00000476787 NUP160Q12769 1436 aa33.52■■■□□ 2.96
PQLC3-208ENST00000476787 KIF27Q86VH2 1401 aa33.5■■■□□ 2.95
PQLC3-208ENST00000476787 CEP170Q5SW79 1584 aa33.47■■■□□ 2.95
PQLC3-208ENST00000476787 IGF1RP08069 1367 aa33.37■■■□□ 2.93
PQLC3-208ENST00000476787 CUL7Q14999 1698 aa33.33■■■□□ 2.93
PQLC3-208ENST00000476787 SHROOM2Q13796 1616 aa33.29■■■□□ 2.92
PQLC3-208ENST00000476787 ERCC6L2Q5T890 1561 aa33.21■■■□□ 2.91
PQLC3-208ENST00000476787 RUSC2Q8N2Y8 1516 aa33.2■■■□□ 2.91
PQLC3-208ENST00000476787 CARMIL1Q5VZK9 1371 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms