RNA–Protein interactions for RNA: ENST00000476683.1

SCN5A-212, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 3

Gene SCN5A, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-212ENST00000476683 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
SCN5A-212ENST00000476683 CCDC180Q9P1Z9 1646 aa35.14■■■■□ 3.22
SCN5A-212ENST00000476683 ABCC9O60706 1549 aa34.46■■■■□ 3.11
SCN5A-212ENST00000476683 RB1CC1Q8TDY2 1594 aa33.12■■■□□ 2.89
SCN5A-212ENST00000476683 NACADO15069 1562 aa33.09■■■□□ 2.89
SCN5A-212ENST00000476683 DCAF8L2P0C7V8 631 aa33.05■■■□□ 2.88
SCN5A-212ENST00000476683 ZCCHC6Q5VYS8 1495 aaKnown RBP32.91■■■□□ 2.86
SCN5A-212ENST00000476683 MYO15BQ96JP2 1530 aa32.91■■■□□ 2.86
SCN5A-212ENST00000476683 DCAF1Q9Y4B6 1507 aa32.73■■■□□ 2.83
SCN5A-212ENST00000476683 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
SCN5A-212ENST00000476683 PABPN1Q86U42 306 aaKnown RBP eCLIP32.23■■■□□ 2.75
SCN5A-212ENST00000476683 BICRAQ9NZM4 1560 aa32.15■■■□□ 2.74
SCN5A-212ENST00000476683 SCRIBQ14160 1630 aa32.03■■■□□ 2.72
SCN5A-212ENST00000476683 SHROOM4Q9ULL8 1493 aa31.81■■■□□ 2.68
SCN5A-212ENST00000476683 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
SCN5A-212ENST00000476683 EIF4G1Q04637 1599 aaKnown RBP31.29■■■□□ 2.6
SCN5A-212ENST00000476683 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
SCN5A-212ENST00000476683 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
SCN5A-212ENST00000476683 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
SCN5A-212ENST00000476683 BAZ1AQ9NRL2 1556 aaPredicted RBP30.63■■■□□ 2.49
SCN5A-212ENST00000476683 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
SCN5A-212ENST00000476683 ATAD2BQ9ULI0 1458 aa30.56■■■□□ 2.48
SCN5A-212ENST00000476683 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
SCN5A-212ENST00000476683 MROH2BQ7Z745 1585 aa30.47■■■□□ 2.47
SCN5A-212ENST00000476683 PEG3Q9GZU2 1588 aa30.4■■■□□ 2.46
SCN5A-212ENST00000476683 HMGXB3Q12766 1538 aa30.37■■■□□ 2.45
SCN5A-212ENST00000476683 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.44
SCN5A-212ENST00000476683 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
SCN5A-212ENST00000476683 WIZO95785 1651 aa30.11■■■□□ 2.41
SCN5A-212ENST00000476683 NESP48681 1621 aa29.82■■■□□ 2.36
SCN5A-212ENST00000476683 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
SCN5A-212ENST00000476683 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
SCN5A-212ENST00000476683 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
SCN5A-212ENST00000476683 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
SCN5A-212ENST00000476683 PDS5BQ9NTI5 1447 aa29.55■■■□□ 2.32
SCN5A-212ENST00000476683 CFTRP13569 1480 aa29.48■■■□□ 2.31
SCN5A-212ENST00000476683 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
SCN5A-212ENST00000476683 CUX2O14529 1486 aa29.43■■■□□ 2.3
SCN5A-212ENST00000476683 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
SCN5A-212ENST00000476683 THOC2Q8NI27 1593 aaKnown RBP29.35■■■□□ 2.29
SCN5A-212ENST00000476683 FANCD2Q9BXW9 1451 aa29.29■■■□□ 2.28
SCN5A-212ENST00000476683 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
SCN5A-212ENST00000476683 CEP164Q9UPV0 1460 aa29.25■■■□□ 2.27
SCN5A-212ENST00000476683 MRC2Q9UBG0 1479 aa29.23■■■□□ 2.27
SCN5A-212ENST00000476683 WDR62O43379 1518 aa29.14■■■□□ 2.25
SCN5A-212ENST00000476683 PRDM2Q13029 1718 aa29.14■■■□□ 2.25
SCN5A-212ENST00000476683 URB2Q14146 1524 aaKnown RBP29.01■■■□□ 2.23
SCN5A-212ENST00000476683 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
SCN5A-212ENST00000476683 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
SCN5A-212ENST00000476683 DNMBPQ6XZF7 1577 aa28.77■■■□□ 2.2
SCN5A-212ENST00000476683 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
SCN5A-212ENST00000476683 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
SCN5A-212ENST00000476683 CUX1P39880 1505 aa28.59■■■□□ 2.17
SCN5A-212ENST00000476683 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
SCN5A-212ENST00000476683 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
SCN5A-212ENST00000476683 TARBP1Q13395 1621 aaKnown RBP28.51■■■□□ 2.15
SCN5A-212ENST00000476683 FGD5Q6ZNL6 1462 aa28.48■■■□□ 2.15
SCN5A-212ENST00000476683 SOGA1O94964 1423 aa28.47■■■□□ 2.15
SCN5A-212ENST00000476683 RAD54L2Q9Y4B4 1467 aa28.45■■■□□ 2.14
SCN5A-212ENST00000476683 WRNQ14191 1432 aaPredicted RBP eCLIP28.38■■■□□ 2.13
SCN5A-212ENST00000476683 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
SCN5A-212ENST00000476683 AQRO60306 1485 aaKnown RBP eCLIP28.37■■■□□ 2.13
SCN5A-212ENST00000476683 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
SCN5A-212ENST00000476683 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
SCN5A-212ENST00000476683 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
SCN5A-212ENST00000476683 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
SCN5A-212ENST00000476683 WDR97A6NE52 1622 aa28.27■■■□□ 2.12
SCN5A-212ENST00000476683 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
SCN5A-212ENST00000476683 ABCA10Q8WWZ4 1543 aa28.22■■■□□ 2.11
SCN5A-212ENST00000476683 GRIN2BQ13224 1484 aa28.14■■■□□ 2.09
SCN5A-212ENST00000476683 GAPVD1Q14C86 1478 aa28.13■■■□□ 2.09
SCN5A-212ENST00000476683 ABCA5Q8WWZ7 1642 aa28.09■■■□□ 2.09
SCN5A-212ENST00000476683 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
SCN5A-212ENST00000476683 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
SCN5A-212ENST00000476683 FBLN2P98095 1184 aa28.03■■■□□ 2.08
SCN5A-212ENST00000476683 CHD1O14646 1710 aa28.01■■■□□ 2.07
SCN5A-212ENST00000476683 PBRM1Q86U86 1689 aa28■■■□□ 2.07
SCN5A-212ENST00000476683 CHMP7Q8WUX9 453 aaPredicted RBP27.97■■■□□ 2.07
SCN5A-212ENST00000476683 SYNJ2O15056 1496 aa27.96■■■□□ 2.07
SCN5A-212ENST00000476683 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
SCN5A-212ENST00000476683 FHAD1B1AJZ9 1412 aa27.81■■■□□ 2.04
SCN5A-212ENST00000476683 ADAMTS12P58397 1594 aa27.81■■■□□ 2.04
SCN5A-212ENST00000476683 KIF27Q86VH2 1401 aa27.79■■■□□ 2.04
SCN5A-212ENST00000476683 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
SCN5A-212ENST00000476683 GRIN2AQ12879 1464 aa27.76■■■□□ 2.04
SCN5A-212ENST00000476683 ARHGEF11O15085 1522 aa27.74■■■□□ 2.03
SCN5A-212ENST00000476683 IGF1RP08069 1367 aa27.73■■■□□ 2.03
SCN5A-212ENST00000476683 RIMBP3CA6NJZ7 1639 aa27.73■■■□□ 2.03
SCN5A-212ENST00000476683 RIMBP3BA6NNM3 1639 aa27.73■■■□□ 2.03
SCN5A-212ENST00000476683 RIMBP3Q9UFD9 1639 aa27.73■■■□□ 2.03
SCN5A-212ENST00000476683 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
SCN5A-212ENST00000476683 NUP160Q12769 1436 aa27.67■■■□□ 2.02
SCN5A-212ENST00000476683 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
SCN5A-212ENST00000476683 CUL7Q14999 1698 aa27.58■■■□□ 2.01
SCN5A-212ENST00000476683 CARMIL1Q5VZK9 1371 aa27.54■■■□□ 2
SCN5A-212ENST00000476683 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
SCN5A-212ENST00000476683 CYB5RLQ6IPT4 315 aa27.52■■■□□ 2
SCN5A-212ENST00000476683 ARAP1Q96P48 1450 aa27.51■■■□□ 2
SCN5A-212ENST00000476683 SHROOM2Q13796 1616 aa27.44■■□□□ 1.98
SCN5A-212ENST00000476683 JPH4Q96JJ6 628 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms