RNA–Protein interactions for RNA: ENST00000476595.1

RS1-202, Transcript of retinoschisin 1, humanhuman

TSL 1 (best)

Gene RS1, Length 1,246 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RS1-202ENST00000476595 NISCHQ9Y2I1 1504 aa50.61■■■■■ 5.69
RS1-202ENST00000476595 CCDC180Q9P1Z9 1646 aa45.28■■■■■ 4.84
RS1-202ENST00000476595 ABCC9O60706 1549 aa44.81■■■■■ 4.76
RS1-202ENST00000476595 RB1CC1Q8TDY2 1594 aa42.89■■■■■ 4.46
RS1-202ENST00000476595 NACADO15069 1562 aa42.71■■■■■ 4.43
RS1-202ENST00000476595 DCAF8L2P0C7V8 631 aa42.35■■■■■ 4.37
RS1-202ENST00000476595 MYO15BQ96JP2 1530 aa42.33■■■■■ 4.37
RS1-202ENST00000476595 ZCCHC6Q5VYS8 1495 aaKnown RBP42.04■■■■■ 4.32
RS1-202ENST00000476595 DCAF1Q9Y4B6 1507 aa41.9■■■■■ 4.3
RS1-202ENST00000476595 UNC13AQ9UPW8 1703 aa41.9■■■■■ 4.3
RS1-202ENST00000476595 PABPN1Q86U42 306 aaKnown RBP eCLIP41.74■■■■■ 4.27
RS1-202ENST00000476595 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
RS1-202ENST00000476595 BICRAQ9NZM4 1560 aa41.65■■■■■ 4.26
RS1-202ENST00000476595 SHROOM4Q9ULL8 1493 aa41.2■■■■■ 4.19
RS1-202ENST00000476595 SCRIBQ14160 1630 aa41.19■■■■■ 4.18
RS1-202ENST00000476595 EIF4G1Q04637 1599 aaKnown RBP40.57■■■■■ 4.09
RS1-202ENST00000476595 CC2D2AQ9P2K1 1620 aa40.55■■■■■ 4.08
RS1-202ENST00000476595 CECR2Q9BXF3 1484 aa40.37■■■■■ 4.05
RS1-202ENST00000476595 NCAPD3P42695 1498 aa39.43■■■■□ 3.9
RS1-202ENST00000476595 SMARCA4P51532 1647 aa39.4■■■■□ 3.9
RS1-202ENST00000476595 ATAD2BQ9ULI0 1458 aa39.35■■■■□ 3.89
RS1-202ENST00000476595 BAZ1AQ9NRL2 1556 aaPredicted RBP39.26■■■■□ 3.88
RS1-202ENST00000476595 SMARCA2P51531 1590 aa39.25■■■■□ 3.87
RS1-202ENST00000476595 HMGXB3Q12766 1538 aa39.19■■■■□ 3.86
RS1-202ENST00000476595 PEG3Q9GZU2 1588 aa39.08■■■■□ 3.85
RS1-202ENST00000476595 MROH2BQ7Z745 1585 aa38.98■■■■□ 3.83
RS1-202ENST00000476595 BAZ1BQ9UIG0 1483 aaKnown RBP38.95■■■■□ 3.83
RS1-202ENST00000476595 ERCC6Q03468 1493 aa38.66■■■■□ 3.78
RS1-202ENST00000476595 NESP48681 1621 aa38.62■■■■□ 3.77
RS1-202ENST00000476595 CUX2O14529 1486 aa38.55■■■■□ 3.76
RS1-202ENST00000476595 WIZO95785 1651 aa38.5■■■■□ 3.75
RS1-202ENST00000476595 LAMC3Q9Y6N6 1575 aa38.47■■■■□ 3.75
RS1-202ENST00000476595 RSF1Q96T23 1441 aaPredicted RBP38.31■■■■□ 3.72
RS1-202ENST00000476595 CADPSQ9ULU8 1353 aa38.22■■■■□ 3.71
RS1-202ENST00000476595 THOC2Q8NI27 1593 aaKnown RBP38.22■■■■□ 3.71
RS1-202ENST00000476595 PDS5BQ9NTI5 1447 aa38.21■■■■□ 3.71
RS1-202ENST00000476595 KIF21AQ7Z4S6 1674 aa38.14■■■■□ 3.7
RS1-202ENST00000476595 TOP2AP11388 1531 aaKnown RBP38.09■■■■□ 3.69
RS1-202ENST00000476595 DNAJC5Q9H3Z4 198 aa38.06■■■■□ 3.68
RS1-202ENST00000476595 CFTRP13569 1480 aa37.89■■■■□ 3.66
RS1-202ENST00000476595 MRC2Q9UBG0 1479 aa37.86■■■■□ 3.65
RS1-202ENST00000476595 WDR62O43379 1518 aa37.79■■■■□ 3.64
RS1-202ENST00000476595 FANCD2Q9BXW9 1451 aa37.77■■■■□ 3.64
RS1-202ENST00000476595 CEP164Q9UPV0 1460 aa37.77■■■■□ 3.64
RS1-202ENST00000476595 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
RS1-202ENST00000476595 PRDM2Q13029 1718 aa37.53■■■■□ 3.6
RS1-202ENST00000476595 URB2Q14146 1524 aaKnown RBP37.45■■■■□ 3.59
RS1-202ENST00000476595 TOPBP1Q92547 1522 aa37.11■■■■□ 3.53
RS1-202ENST00000476595 ABCC8Q09428 1581 aa37.08■■■■□ 3.53
RS1-202ENST00000476595 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
RS1-202ENST00000476595 DNMBPQ6XZF7 1577 aa37.02■■■■□ 3.52
RS1-202ENST00000476595 ZNF608Q9ULD9 1512 aaPredicted RBP36.9■■■■□ 3.5
RS1-202ENST00000476595 OSCARQ8IYS5 282 aa36.78■■■■□ 3.48
RS1-202ENST00000476595 TARBP1Q13395 1621 aaKnown RBP36.77■■■■□ 3.48
RS1-202ENST00000476595 POLA1P09884 1462 aaPredicted RBP36.75■■■■□ 3.47
RS1-202ENST00000476595 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
RS1-202ENST00000476595 EIF4G3O43432 1585 aaKnown RBP36.74■■■■□ 3.47
RS1-202ENST00000476595 CUX1P39880 1505 aa36.6■■■■□ 3.45
RS1-202ENST00000476595 AQRO60306 1485 aaKnown RBP eCLIP36.6■■■■□ 3.45
RS1-202ENST00000476595 RAD54L2Q9Y4B4 1467 aa36.58■■■■□ 3.45
RS1-202ENST00000476595 FGD5Q6ZNL6 1462 aa36.56■■■■□ 3.44
RS1-202ENST00000476595 SOGA1O94964 1423 aa36.56■■■■□ 3.44
RS1-202ENST00000476595 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
RS1-202ENST00000476595 TDRD9Q8NDG6 1382 aaKnown RBP36.42■■■■□ 3.42
RS1-202ENST00000476595 TRIM41Q8WV44 630 aa36.42■■■■□ 3.42
RS1-202ENST00000476595 CHD1O14646 1710 aa36.37■■■■□ 3.41
RS1-202ENST00000476595 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
RS1-202ENST00000476595 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
RS1-202ENST00000476595 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
RS1-202ENST00000476595 SNAPC4Q5SXM2 1469 aa36.25■■■■□ 3.39
RS1-202ENST00000476595 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
RS1-202ENST00000476595 ARHGEF11O15085 1522 aa36.23■■■■□ 3.39
RS1-202ENST00000476595 MAGI1Q96QZ7 1491 aaPredicted RBP36.22■■■■□ 3.39
RS1-202ENST00000476595 ABCA10Q8WWZ4 1543 aa36.22■■■■□ 3.39
RS1-202ENST00000476595 FBLN2P98095 1184 aa36.19■■■■□ 3.38
RS1-202ENST00000476595 BIVM-ERCC5R4GMW8 1640 aa36.14■■■■□ 3.38
RS1-202ENST00000476595 GAPVD1Q14C86 1478 aa36.13■■■■□ 3.37
RS1-202ENST00000476595 TOP2BQ02880 1626 aa36.13■■■■□ 3.37
RS1-202ENST00000476595 ABCA5Q8WWZ7 1642 aa36.12■■■■□ 3.37
RS1-202ENST00000476595 WRNQ14191 1432 aaPredicted RBP eCLIP36.12■■■■□ 3.37
RS1-202ENST00000476595 PBRM1Q86U86 1689 aa36.1■■■■□ 3.37
RS1-202ENST00000476595 SYNJ1O43426 1573 aa36.08■■■■□ 3.37
RS1-202ENST00000476595 SYNJ2O15056 1496 aa36.07■■■■□ 3.37
RS1-202ENST00000476595 CHMP7Q8WUX9 453 aaPredicted RBP36.04■■■■□ 3.36
RS1-202ENST00000476595 CLASP1Q7Z460 1538 aa36.03■■■■□ 3.36
RS1-202ENST00000476595 ARAP1Q96P48 1450 aa35.9■■■■□ 3.34
RS1-202ENST00000476595 CYB5RLQ6IPT4 315 aa35.85■■■■□ 3.33
RS1-202ENST00000476595 ADAMTS12P58397 1594 aa35.81■■■■□ 3.32
RS1-202ENST00000476595 GRIN2AQ12879 1464 aa35.77■■■■□ 3.32
RS1-202ENST00000476595 ERICH3Q5RHP9 1530 aa35.76■■■■□ 3.31
RS1-202ENST00000476595 FHAD1B1AJZ9 1412 aa35.72■■■■□ 3.31
RS1-202ENST00000476595 NUP160Q12769 1436 aa35.67■■■■□ 3.3
RS1-202ENST00000476595 CEP170Q5SW79 1584 aa35.63■■■■□ 3.29
RS1-202ENST00000476595 SHROOM2Q13796 1616 aa35.47■■■■□ 3.27
RS1-202ENST00000476595 ERCC6L2Q5T890 1561 aa35.44■■■■□ 3.26
RS1-202ENST00000476595 KIF27Q86VH2 1401 aa35.4■■■■□ 3.26
RS1-202ENST00000476595 IGF1RP08069 1367 aa35.37■■■■□ 3.25
RS1-202ENST00000476595 RUSC2Q8N2Y8 1516 aa35.3■■■■□ 3.24
RS1-202ENST00000476595 CUL7Q14999 1698 aa35.3■■■■□ 3.24
RS1-202ENST00000476595 TRHP20396 242 aaPredicted RBP35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms