RNA–Protein interactions for RNA: ENST00000476548.1

IFT27-210, Transcript of intraflagellar transport 27, humanhuman

TSL 2

Gene IFT27, Length 902 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-210ENST00000476548 NISCHQ9Y2I1 1504 aa46.9■■■■■ 5.1
IFT27-210ENST00000476548 CCDC180Q9P1Z9 1646 aa42.03■■■■■ 4.32
IFT27-210ENST00000476548 ABCC9O60706 1549 aa41.95■■■■■ 4.31
IFT27-210ENST00000476548 RB1CC1Q8TDY2 1594 aa40.01■■■■□ 3.99
IFT27-210ENST00000476548 NACADO15069 1562 aa39.77■■■■□ 3.96
IFT27-210ENST00000476548 DCAF8L2P0C7V8 631 aa39.52■■■■□ 3.92
IFT27-210ENST00000476548 MYO15BQ96JP2 1530 aa39.31■■■■□ 3.88
IFT27-210ENST00000476548 DNAJC5BQ9UF47 199 aa39.29■■■■□ 3.88
IFT27-210ENST00000476548 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.85
IFT27-210ENST00000476548 UNC13AQ9UPW8 1703 aa38.96■■■■□ 3.83
IFT27-210ENST00000476548 ZCCHC6Q5VYS8 1495 aaKnown RBP38.89■■■■□ 3.82
IFT27-210ENST00000476548 DCAF1Q9Y4B6 1507 aa38.8■■■■□ 3.8
IFT27-210ENST00000476548 BICRAQ9NZM4 1560 aa38.78■■■■□ 3.8
IFT27-210ENST00000476548 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
IFT27-210ENST00000476548 SCRIBQ14160 1630 aa38.25■■■■□ 3.71
IFT27-210ENST00000476548 CC2D2AQ9P2K1 1620 aa37.9■■■■□ 3.66
IFT27-210ENST00000476548 EIF4G1Q04637 1599 aaKnown RBP37.86■■■■□ 3.65
IFT27-210ENST00000476548 CECR2Q9BXF3 1484 aa37.82■■■■□ 3.64
IFT27-210ENST00000476548 NCAPD3P42695 1498 aa36.74■■■■□ 3.47
IFT27-210ENST00000476548 ATAD2BQ9ULI0 1458 aa36.6■■■■□ 3.45
IFT27-210ENST00000476548 SMARCA4P51532 1647 aa36.53■■■■□ 3.44
IFT27-210ENST00000476548 SMARCA2P51531 1590 aa36.52■■■■□ 3.44
IFT27-210ENST00000476548 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
IFT27-210ENST00000476548 BAZ1AQ9NRL2 1556 aaPredicted RBP36.42■■■■□ 3.42
IFT27-210ENST00000476548 ERCC6Q03468 1493 aa36.25■■■■□ 3.39
IFT27-210ENST00000476548 BAZ1BQ9UIG0 1483 aaKnown RBP36.24■■■■□ 3.39
IFT27-210ENST00000476548 PEG3Q9GZU2 1588 aa36.24■■■■□ 3.39
IFT27-210ENST00000476548 CUX2O14529 1486 aa36.21■■■■□ 3.39
IFT27-210ENST00000476548 DNAJC5Q9H3Z4 198 aa36.11■■■■□ 3.37
IFT27-210ENST00000476548 MROH2BQ7Z745 1585 aa36.1■■■■□ 3.37
IFT27-210ENST00000476548 NESP48681 1621 aa36.03■■■■□ 3.36
IFT27-210ENST00000476548 LAMC3Q9Y6N6 1575 aa35.87■■■■□ 3.33
IFT27-210ENST00000476548 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
IFT27-210ENST00000476548 THOC2Q8NI27 1593 aaKnown RBP35.67■■■■□ 3.3
IFT27-210ENST00000476548 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
IFT27-210ENST00000476548 WIZO95785 1651 aa35.62■■■■□ 3.29
IFT27-210ENST00000476548 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
IFT27-210ENST00000476548 RSF1Q96T23 1441 aaPredicted RBP35.42■■■■□ 3.26
IFT27-210ENST00000476548 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
IFT27-210ENST00000476548 TOP2AP11388 1531 aaKnown RBP35.26■■■■□ 3.23
IFT27-210ENST00000476548 WDR62O43379 1518 aa35.25■■■■□ 3.23
IFT27-210ENST00000476548 CFTRP13569 1480 aa35.22■■■■□ 3.23
IFT27-210ENST00000476548 CEP164Q9UPV0 1460 aa35.22■■■■□ 3.23
IFT27-210ENST00000476548 FANCD2Q9BXW9 1451 aa35.18■■■■□ 3.22
IFT27-210ENST00000476548 URB2Q14146 1524 aaKnown RBP34.86■■■■□ 3.17
IFT27-210ENST00000476548 CCDC88BA6NC98 1476 aa34.85■■■■□ 3.17
IFT27-210ENST00000476548 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
IFT27-210ENST00000476548 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
IFT27-210ENST00000476548 IFT140Q96RY7 1462 aa34.54■■■■□ 3.12
IFT27-210ENST00000476548 ABCC8Q09428 1581 aa34.52■■■■□ 3.12
IFT27-210ENST00000476548 TOPBP1Q92547 1522 aa34.51■■■■□ 3.12
IFT27-210ENST00000476548 TRIM41Q8WV44 630 aa34.48■■■■□ 3.11
IFT27-210ENST00000476548 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
IFT27-210ENST00000476548 DNMBPQ6XZF7 1577 aa34.39■■■■□ 3.1
IFT27-210ENST00000476548 EIF4G3O43432 1585 aaKnown RBP34.21■■■■□ 3.07
IFT27-210ENST00000476548 POLA1P09884 1462 aaPredicted RBP34.17■■■■□ 3.06
IFT27-210ENST00000476548 TARBP1Q13395 1621 aaKnown RBP34.17■■■■□ 3.06
IFT27-210ENST00000476548 AQRO60306 1485 aaKnown RBP eCLIP34.12■■■■□ 3.05
IFT27-210ENST00000476548 SOGA1O94964 1423 aa34.04■■■■□ 3.04
IFT27-210ENST00000476548 RIMBP3CA6NJZ7 1639 aa34.01■■■■□ 3.04
IFT27-210ENST00000476548 RIMBP3BA6NNM3 1639 aa34.01■■■■□ 3.04
IFT27-210ENST00000476548 RIMBP3Q9UFD9 1639 aa34.01■■■■□ 3.04
IFT27-210ENST00000476548 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.03
IFT27-210ENST00000476548 ARHGEF11O15085 1522 aa33.96■■■■□ 3.03
IFT27-210ENST00000476548 FGD5Q6ZNL6 1462 aa33.95■■■■□ 3.02
IFT27-210ENST00000476548 TDRD9Q8NDG6 1382 aaKnown RBP33.93■■■■□ 3.02
IFT27-210ENST00000476548 CUX1P39880 1505 aa33.92■■■■□ 3.02
IFT27-210ENST00000476548 WDR97A6NE52 1622 aa33.91■■■■□ 3.02
IFT27-210ENST00000476548 FBLN2P98095 1184 aa33.89■■■■□ 3.02
IFT27-210ENST00000476548 CHD1O14646 1710 aa33.89■■■■□ 3.02
IFT27-210ENST00000476548 SUPT5HO00267 1087 aaKnown RBP33.86■■■■□ 3.01
IFT27-210ENST00000476548 SNAPC4Q5SXM2 1469 aa33.78■■■■□ 3
IFT27-210ENST00000476548 MAGI1Q96QZ7 1491 aaPredicted RBP33.75■■■□□ 2.99
IFT27-210ENST00000476548 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
IFT27-210ENST00000476548 CYB5RLQ6IPT4 315 aa33.72■■■□□ 2.99
IFT27-210ENST00000476548 CHMP7Q8WUX9 453 aaPredicted RBP33.7■■■□□ 2.99
IFT27-210ENST00000476548 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
IFT27-210ENST00000476548 SYNJ2O15056 1496 aa33.62■■■□□ 2.97
IFT27-210ENST00000476548 GAPVD1Q14C86 1478 aa33.62■■■□□ 2.97
IFT27-210ENST00000476548 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
IFT27-210ENST00000476548 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
IFT27-210ENST00000476548 CLASP1Q7Z460 1538 aa33.59■■■□□ 2.97
IFT27-210ENST00000476548 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.95
IFT27-210ENST00000476548 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
IFT27-210ENST00000476548 PBRM1Q86U86 1689 aa33.5■■■□□ 2.95
IFT27-210ENST00000476548 TOP2BQ02880 1626 aa33.41■■■□□ 2.94
IFT27-210ENST00000476548 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.93
IFT27-210ENST00000476548 TRHP20396 242 aaPredicted RBP33.32■■■□□ 2.92
IFT27-210ENST00000476548 GRIN2AQ12879 1464 aa33.29■■■□□ 2.92
IFT27-210ENST00000476548 ADAMTS12P58397 1594 aa33.25■■■□□ 2.91
IFT27-210ENST00000476548 FHAD1B1AJZ9 1412 aa33.22■■■□□ 2.91
IFT27-210ENST00000476548 NUP160Q12769 1436 aa33.19■■■□□ 2.9
IFT27-210ENST00000476548 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
IFT27-210ENST00000476548 CEP170Q5SW79 1584 aa33.12■■■□□ 2.89
IFT27-210ENST00000476548 ERCC6L2Q5T890 1561 aa33■■■□□ 2.87
IFT27-210ENST00000476548 SHROOM2Q13796 1616 aa32.99■■■□□ 2.87
IFT27-210ENST00000476548 JPH4Q96JJ6 628 aa32.87■■■□□ 2.85
IFT27-210ENST00000476548 PRG4Q92954 1404 aaPredicted RBP32.85■■■□□ 2.85
IFT27-210ENST00000476548 KIF27Q86VH2 1401 aa32.81■■■□□ 2.84
IFT27-210ENST00000476548 IGF1RP08069 1367 aa32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms