RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
RAB5A-208ENST00000476544 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
RAB5A-208ENST00000476544 ABCC9O60706 1549 aa29.19■■■□□ 2.26
RAB5A-208ENST00000476544 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
RAB5A-208ENST00000476544 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
RAB5A-208ENST00000476544 NACADO15069 1562 aa27.84■■■□□ 2.05
RAB5A-208ENST00000476544 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
RAB5A-208ENST00000476544 MYO15BQ96JP2 1530 aa27.68■■■□□ 2.02
RAB5A-208ENST00000476544 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
RAB5A-208ENST00000476544 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
RAB5A-208ENST00000476544 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
RAB5A-208ENST00000476544 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
RAB5A-208ENST00000476544 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
RAB5A-208ENST00000476544 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
RAB5A-208ENST00000476544 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
RAB5A-208ENST00000476544 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
RAB5A-208ENST00000476544 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
RAB5A-208ENST00000476544 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.78
RAB5A-208ENST00000476544 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
RAB5A-208ENST00000476544 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
RAB5A-208ENST00000476544 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
RAB5A-208ENST00000476544 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
RAB5A-208ENST00000476544 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
RAB5A-208ENST00000476544 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
RAB5A-208ENST00000476544 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
RAB5A-208ENST00000476544 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
RAB5A-208ENST00000476544 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
RAB5A-208ENST00000476544 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
RAB5A-208ENST00000476544 WIZO95785 1651 aa25.36■■□□□ 1.65
RAB5A-208ENST00000476544 NESP48681 1621 aa25.26■■□□□ 1.63
RAB5A-208ENST00000476544 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
RAB5A-208ENST00000476544 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
RAB5A-208ENST00000476544 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
RAB5A-208ENST00000476544 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
RAB5A-208ENST00000476544 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
RAB5A-208ENST00000476544 PDS5BQ9NTI5 1447 aa24.94■■□□□ 1.58
RAB5A-208ENST00000476544 CFTRP13569 1480 aa24.9■■□□□ 1.58
RAB5A-208ENST00000476544 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
RAB5A-208ENST00000476544 CUX2O14529 1486 aa24.82■■□□□ 1.56
RAB5A-208ENST00000476544 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
RAB5A-208ENST00000476544 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
RAB5A-208ENST00000476544 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
RAB5A-208ENST00000476544 MRC2Q9UBG0 1479 aa24.65■■□□□ 1.54
RAB5A-208ENST00000476544 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
RAB5A-208ENST00000476544 WDR62O43379 1518 aa24.55■■□□□ 1.52
RAB5A-208ENST00000476544 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
RAB5A-208ENST00000476544 DNAJC5Q9H3Z4 198 aa24.43■■□□□ 1.5
RAB5A-208ENST00000476544 TOPBP1Q92547 1522 aa24.33■■□□□ 1.49
RAB5A-208ENST00000476544 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
RAB5A-208ENST00000476544 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
RAB5A-208ENST00000476544 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
RAB5A-208ENST00000476544 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
RAB5A-208ENST00000476544 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
RAB5A-208ENST00000476544 CUX1P39880 1505 aa24.14■■□□□ 1.45
RAB5A-208ENST00000476544 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
RAB5A-208ENST00000476544 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
RAB5A-208ENST00000476544 SOGA1O94964 1423 aa24.1■■□□□ 1.45
RAB5A-208ENST00000476544 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.442e-8■□□□□ 8.7
RAB5A-208ENST00000476544 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
RAB5A-208ENST00000476544 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
RAB5A-208ENST00000476544 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
RAB5A-208ENST00000476544 OSCARQ8IYS5 282 aa23.97■■□□□ 1.43
RAB5A-208ENST00000476544 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
RAB5A-208ENST00000476544 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
RAB5A-208ENST00000476544 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
RAB5A-208ENST00000476544 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
RAB5A-208ENST00000476544 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
RAB5A-208ENST00000476544 FBLN2P98095 1184 aa23.77■■□□□ 1.4
RAB5A-208ENST00000476544 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
RAB5A-208ENST00000476544 GRIN2BQ13224 1484 aa23.74■■□□□ 1.39
RAB5A-208ENST00000476544 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
RAB5A-208ENST00000476544 SNAPC4Q5SXM2 1469 aa23.71■■□□□ 1.39
RAB5A-208ENST00000476544 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
RAB5A-208ENST00000476544 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
RAB5A-208ENST00000476544 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
RAB5A-208ENST00000476544 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
RAB5A-208ENST00000476544 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
RAB5A-208ENST00000476544 IGF1RP08069 1367 aa23.53■■□□□ 1.36
RAB5A-208ENST00000476544 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
RAB5A-208ENST00000476544 CHD1O14646 1710 aa23.5■■□□□ 1.35
RAB5A-208ENST00000476544 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
RAB5A-208ENST00000476544 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
RAB5A-208ENST00000476544 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
RAB5A-208ENST00000476544 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
RAB5A-208ENST00000476544 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
RAB5A-208ENST00000476544 GRIN2AQ12879 1464 aa23.42■■□□□ 1.34
RAB5A-208ENST00000476544 CLASP1Q7Z460 1538 aa23.41■■□□□ 1.34
RAB5A-208ENST00000476544 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
RAB5A-208ENST00000476544 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
RAB5A-208ENST00000476544 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
RAB5A-208ENST00000476544 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
RAB5A-208ENST00000476544 NUP160Q12769 1436 aa23.38■■□□□ 1.33
RAB5A-208ENST00000476544 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
RAB5A-208ENST00000476544 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
RAB5A-208ENST00000476544 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
RAB5A-208ENST00000476544 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
RAB5A-208ENST00000476544 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
RAB5A-208ENST00000476544 JPH4Q96JJ6 628 aa23.27■■□□□ 1.32
RAB5A-208ENST00000476544 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
RAB5A-208ENST00000476544 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
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