RNA–Protein interactions for RNA: ENST00000476538.1

APH1A-206, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-206ENST00000476538 NISCHQ9Y2I1 1504 aa37.41■■■■□ 3.58
APH1A-206ENST00000476538 CCDC180Q9P1Z9 1646 aa33.46■■■□□ 2.95
APH1A-206ENST00000476538 ABCC9O60706 1549 aa33■■■□□ 2.87
APH1A-206ENST00000476538 RB1CC1Q8TDY2 1594 aa31.63■■■□□ 2.65
APH1A-206ENST00000476538 NACADO15069 1562 aa31.51■■■□□ 2.63
APH1A-206ENST00000476538 DCAF8L2P0C7V8 631 aa31.29■■■□□ 2.6
APH1A-206ENST00000476538 MYO15BQ96JP2 1530 aa31.23■■■□□ 2.59
APH1A-206ENST00000476538 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
APH1A-206ENST00000476538 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
APH1A-206ENST00000476538 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
APH1A-206ENST00000476538 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
APH1A-206ENST00000476538 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
APH1A-206ENST00000476538 DNAJC5BQ9UF47 199 aa30.53■■■□□ 2.48
APH1A-206ENST00000476538 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
APH1A-206ENST00000476538 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
APH1A-206ENST00000476538 EIF4G1Q04637 1599 aaKnown RBP29.91■■■□□ 2.38
APH1A-206ENST00000476538 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
APH1A-206ENST00000476538 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
APH1A-206ENST00000476538 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
APH1A-206ENST00000476538 NCAPD3P42695 1498 aa29.06■■■□□ 2.24
APH1A-206ENST00000476538 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
APH1A-206ENST00000476538 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
APH1A-206ENST00000476538 SMARCA2P51531 1590 aa29■■■□□ 2.23
APH1A-206ENST00000476538 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
APH1A-206ENST00000476538 PEG3Q9GZU2 1588 aa28.86■■■□□ 2.21
APH1A-206ENST00000476538 MROH2BQ7Z745 1585 aa28.82■■■□□ 2.2
APH1A-206ENST00000476538 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
APH1A-206ENST00000476538 WIZO95785 1651 aa28.5■■■□□ 2.15
APH1A-206ENST00000476538 ERCC6Q03468 1493 aa28.48■■■□□ 2.15
APH1A-206ENST00000476538 NESP48681 1621 aa28.46■■■□□ 2.15
APH1A-206ENST00000476538 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
APH1A-206ENST00000476538 RSF1Q96T23 1441 aaPredicted RBP28.36■■■□□ 2.13
APH1A-206ENST00000476538 CUX2O14529 1486 aa28.32■■■□□ 2.12
APH1A-206ENST00000476538 TOP2AP11388 1531 aaKnown RBP28.21■■■□□ 2.11
APH1A-206ENST00000476538 CADPSQ9ULU8 1353 aa28.18■■■□□ 2.1
APH1A-206ENST00000476538 PDS5BQ9NTI5 1447 aa28.17■■■□□ 2.1
APH1A-206ENST00000476538 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
APH1A-206ENST00000476538 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.1
APH1A-206ENST00000476538 CFTRP13569 1480 aa27.96■■■□□ 2.07
APH1A-206ENST00000476538 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
APH1A-206ENST00000476538 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.05
APH1A-206ENST00000476538 FANCD2Q9BXW9 1451 aa27.88■■■□□ 2.05
APH1A-206ENST00000476538 WDR62O43379 1518 aa27.86■■■□□ 2.05
APH1A-206ENST00000476538 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.04
APH1A-206ENST00000476538 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
APH1A-206ENST00000476538 PRDM2Q13029 1718 aa27.77■■■□□ 2.04
APH1A-206ENST00000476538 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
APH1A-206ENST00000476538 TOPBP1Q92547 1522 aa27.4■■□□□ 1.98
APH1A-206ENST00000476538 ABCC8Q09428 1581 aa27.37■■□□□ 1.97
APH1A-206ENST00000476538 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
APH1A-206ENST00000476538 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
APH1A-206ENST00000476538 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
APH1A-206ENST00000476538 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
APH1A-206ENST00000476538 POLA1P09884 1462 aaPredicted RBP27.15■■□□□ 1.94
APH1A-206ENST00000476538 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.94
APH1A-206ENST00000476538 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
APH1A-206ENST00000476538 CUX1P39880 1505 aa27.06■■□□□ 1.92
APH1A-206ENST00000476538 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
APH1A-206ENST00000476538 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
APH1A-206ENST00000476538 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
APH1A-206ENST00000476538 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.91
APH1A-206ENST00000476538 SOGA1O94964 1423 aa26.99■■□□□ 1.91
APH1A-206ENST00000476538 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
APH1A-206ENST00000476538 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
APH1A-206ENST00000476538 CHD1O14646 1710 aa26.83■■□□□ 1.89
APH1A-206ENST00000476538 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
APH1A-206ENST00000476538 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
APH1A-206ENST00000476538 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
APH1A-206ENST00000476538 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
APH1A-206ENST00000476538 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
APH1A-206ENST00000476538 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
APH1A-206ENST00000476538 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
APH1A-206ENST00000476538 MAGI1Q96QZ7 1491 aaPredicted RBP26.73■■□□□ 1.87
APH1A-206ENST00000476538 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
APH1A-206ENST00000476538 PBRM1Q86U86 1689 aa26.7■■□□□ 1.87
APH1A-206ENST00000476538 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
APH1A-206ENST00000476538 GAPVD1Q14C86 1478 aa26.69■■□□□ 1.86
APH1A-206ENST00000476538 FBLN2P98095 1184 aa26.69■■□□□ 1.86
APH1A-206ENST00000476538 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
APH1A-206ENST00000476538 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
APH1A-206ENST00000476538 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
APH1A-206ENST00000476538 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
APH1A-206ENST00000476538 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
APH1A-206ENST00000476538 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
APH1A-206ENST00000476538 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
APH1A-206ENST00000476538 ADAMTS12P58397 1594 aa26.49■■□□□ 1.83
APH1A-206ENST00000476538 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
APH1A-206ENST00000476538 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
APH1A-206ENST00000476538 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
APH1A-206ENST00000476538 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
APH1A-206ENST00000476538 CYB5RLQ6IPT4 315 aa26.34■■□□□ 1.81
APH1A-206ENST00000476538 NUP160Q12769 1436 aa26.31■■□□□ 1.8
APH1A-206ENST00000476538 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
APH1A-206ENST00000476538 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
APH1A-206ENST00000476538 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
APH1A-206ENST00000476538 CUL7Q14999 1698 aa26.15■■□□□ 1.78
APH1A-206ENST00000476538 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
APH1A-206ENST00000476538 IGF1RP08069 1367 aa26.12■■□□□ 1.77
APH1A-206ENST00000476538 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
APH1A-206ENST00000476538 PRG4Q92954 1404 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms