RNA–Protein interactions for RNA: ENST00000476463.1

SEM1-208, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 427 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-208ENST00000476463 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.17
SEM1-208ENST00000476463 CCDC180Q9P1Z9 1646 aa25.6■■□□□ 1.69
SEM1-208ENST00000476463 ABCC9O60706 1549 aa25.38■■□□□ 1.65
SEM1-208ENST00000476463 RB1CC1Q8TDY2 1594 aa24.22■■□□□ 1.47
SEM1-208ENST00000476463 NACADO15069 1562 aa24.13■■□□□ 1.45
SEM1-208ENST00000476463 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
SEM1-208ENST00000476463 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
SEM1-208ENST00000476463 UNC13AQ9UPW8 1703 aa23.84■■□□□ 1.41
SEM1-208ENST00000476463 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
SEM1-208ENST00000476463 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
SEM1-208ENST00000476463 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
SEM1-208ENST00000476463 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
SEM1-208ENST00000476463 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
SEM1-208ENST00000476463 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
SEM1-208ENST00000476463 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
SEM1-208ENST00000476463 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
SEM1-208ENST00000476463 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
SEM1-208ENST00000476463 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
SEM1-208ENST00000476463 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
SEM1-208ENST00000476463 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
SEM1-208ENST00000476463 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
SEM1-208ENST00000476463 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
SEM1-208ENST00000476463 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
SEM1-208ENST00000476463 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
SEM1-208ENST00000476463 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
SEM1-208ENST00000476463 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
SEM1-208ENST00000476463 BAZ1BQ9UIG0 1483 aaKnown RBP21.99■■□□□ 1.11
SEM1-208ENST00000476463 NESP48681 1621 aa21.92■■□□□ 1.1
SEM1-208ENST00000476463 WIZO95785 1651 aa21.84■■□□□ 1.09
SEM1-208ENST00000476463 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
SEM1-208ENST00000476463 CUX2O14529 1486 aa21.77■■□□□ 1.08
SEM1-208ENST00000476463 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
SEM1-208ENST00000476463 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
SEM1-208ENST00000476463 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
SEM1-208ENST00000476463 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
SEM1-208ENST00000476463 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
SEM1-208ENST00000476463 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.05
SEM1-208ENST00000476463 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
SEM1-208ENST00000476463 TOP2AP11388 1531 aaKnown RBP21.53■■□□□ 1.04
SEM1-208ENST00000476463 CFTRP13569 1480 aa21.43■■□□□ 1.02
SEM1-208ENST00000476463 WDR62O43379 1518 aa21.39■■□□□ 1.02
SEM1-208ENST00000476463 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.02
SEM1-208ENST00000476463 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
SEM1-208ENST00000476463 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
SEM1-208ENST00000476463 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
SEM1-208ENST00000476463 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
SEM1-208ENST00000476463 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
SEM1-208ENST00000476463 TOPBP1Q92547 1522 aa21■□□□□ 0.95
SEM1-208ENST00000476463 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
SEM1-208ENST00000476463 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
SEM1-208ENST00000476463 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
SEM1-208ENST00000476463 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
SEM1-208ENST00000476463 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
SEM1-208ENST00000476463 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
SEM1-208ENST00000476463 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
SEM1-208ENST00000476463 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
SEM1-208ENST00000476463 CUX1P39880 1505 aa20.74■□□□□ 0.91
SEM1-208ENST00000476463 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.91
SEM1-208ENST00000476463 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
SEM1-208ENST00000476463 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
SEM1-208ENST00000476463 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
SEM1-208ENST00000476463 SOGA1O94964 1423 aa20.65■□□□□ 0.9
SEM1-208ENST00000476463 CHD1O14646 1710 aa20.63■□□□□ 0.89
SEM1-208ENST00000476463 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
SEM1-208ENST00000476463 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
SEM1-208ENST00000476463 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
SEM1-208ENST00000476463 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
SEM1-208ENST00000476463 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
SEM1-208ENST00000476463 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
SEM1-208ENST00000476463 ARHGEF11O15085 1522 aa20.52■□□□□ 0.87
SEM1-208ENST00000476463 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
SEM1-208ENST00000476463 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
SEM1-208ENST00000476463 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
SEM1-208ENST00000476463 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.87
SEM1-208ENST00000476463 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
SEM1-208ENST00000476463 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
SEM1-208ENST00000476463 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
SEM1-208ENST00000476463 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
SEM1-208ENST00000476463 TOP2BQ02880 1626 aa20.43■□□□□ 0.86
SEM1-208ENST00000476463 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
SEM1-208ENST00000476463 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
SEM1-208ENST00000476463 FBLN2P98095 1184 aa20.4■□□□□ 0.86
SEM1-208ENST00000476463 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
SEM1-208ENST00000476463 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
SEM1-208ENST00000476463 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
SEM1-208ENST00000476463 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
SEM1-208ENST00000476463 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
SEM1-208ENST00000476463 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
SEM1-208ENST00000476463 GRIN2AQ12879 1464 aa20.22■□□□□ 0.83
SEM1-208ENST00000476463 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
SEM1-208ENST00000476463 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
SEM1-208ENST00000476463 NUP160Q12769 1436 aa20.18■□□□□ 0.82
SEM1-208ENST00000476463 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
SEM1-208ENST00000476463 ERCC6L2Q5T890 1561 aa20.15■□□□□ 0.82
SEM1-208ENST00000476463 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
SEM1-208ENST00000476463 IGF1RP08069 1367 aa20■□□□□ 0.79
SEM1-208ENST00000476463 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
SEM1-208ENST00000476463 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
SEM1-208ENST00000476463 CUL7Q14999 1698 aa19.92■□□□□ 0.78
SEM1-208ENST00000476463 PRG4Q92954 1404 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms