RNA–Protein interactions for RNA: ENST00000476452.3

RN7SL222P-201, Transcript of RNA, 7SL, cytoplasmic 222, pseudogene, humanhuman

BASIC

Gene RN7SL222P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL222P-201ENST00000476452 NISCHQ9Y2I1 1504 aa13.78□□□□□ -0.2
RN7SL222P-201ENST00000476452 CCDC180Q9P1Z9 1646 aa12.54□□□□□ -0.4
RN7SL222P-201ENST00000476452 ABCC9O60706 1549 aa12.4□□□□□ -0.42
RN7SL222P-201ENST00000476452 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
RN7SL222P-201ENST00000476452 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
RN7SL222P-201ENST00000476452 NACADO15069 1562 aa11.74□□□□□ -0.53
RN7SL222P-201ENST00000476452 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
RN7SL222P-201ENST00000476452 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.55
RN7SL222P-201ENST00000476452 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
RN7SL222P-201ENST00000476452 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
RN7SL222P-201ENST00000476452 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
RN7SL222P-201ENST00000476452 DCAF1Q9Y4B6 1507 aa11.41□□□□□ -0.58
RN7SL222P-201ENST00000476452 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
RN7SL222P-201ENST00000476452 SHROOM4Q9ULL8 1493 aa11.36□□□□□ -0.59
RN7SL222P-201ENST00000476452 SCRIBQ14160 1630 aa11.34□□□□□ -0.59
RN7SL222P-201ENST00000476452 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
RN7SL222P-201ENST00000476452 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
RN7SL222P-201ENST00000476452 CECR2Q9BXF3 1484 aa11.18□□□□□ -0.62
RN7SL222P-201ENST00000476452 SMARCA4P51532 1647 aa10.84□□□□□ -0.67
RN7SL222P-201ENST00000476452 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
RN7SL222P-201ENST00000476452 NCAPD3P42695 1498 aa10.79□□□□□ -0.68
RN7SL222P-201ENST00000476452 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
RN7SL222P-201ENST00000476452 SMARCA2P51531 1590 aa10.76□□□□□ -0.69
RN7SL222P-201ENST00000476452 CUX2O14529 1486 aa10.74□□□□□ -0.69
RN7SL222P-201ENST00000476452 PEG3Q9GZU2 1588 aa10.73□□□□□ -0.69
RN7SL222P-201ENST00000476452 THOC2Q8NI27 1593 aaKnown RBP10.7□□□□□ -0.7
RN7SL222P-201ENST00000476452 BAZ1AQ9NRL2 1556 aaPredicted RBP10.7□□□□□ -0.7
RN7SL222P-201ENST00000476452 KIF21AQ7Z4S6 1674 aa10.69□□□□□ -0.7
RN7SL222P-201ENST00000476452 DNAJC5Q9H3Z4 198 aa10.68□□□□□ -0.7
RN7SL222P-201ENST00000476452 NESP48681 1621 aa10.68□□□□□ -0.7
RN7SL222P-201ENST00000476452 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
RN7SL222P-201ENST00000476452 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
RN7SL222P-201ENST00000476452 MROH2BQ7Z745 1585 aa10.63□□□□□ -0.71
RN7SL222P-201ENST00000476452 LAMC3Q9Y6N6 1575 aa10.63□□□□□ -0.71
RN7SL222P-201ENST00000476452 WIZO95785 1651 aa10.56□□□□□ -0.72
RN7SL222P-201ENST00000476452 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
RN7SL222P-201ENST00000476452 WDR62O43379 1518 aa10.48□□□□□ -0.73
RN7SL222P-201ENST00000476452 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
RN7SL222P-201ENST00000476452 MRC2Q9UBG0 1479 aa10.42□□□□□ -0.74
RN7SL222P-201ENST00000476452 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
RN7SL222P-201ENST00000476452 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
RN7SL222P-201ENST00000476452 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
RN7SL222P-201ENST00000476452 CFTRP13569 1480 aa10.34□□□□□ -0.75
RN7SL222P-201ENST00000476452 FANCD2Q9BXW9 1451 aa10.34□□□□□ -0.75
RN7SL222P-201ENST00000476452 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
RN7SL222P-201ENST00000476452 URB2Q14146 1524 aaKnown RBP10.32□□□□□ -0.76
RN7SL222P-201ENST00000476452 EIF4G3O43432 1585 aaKnown RBP10.21□□□□□ -0.78
RN7SL222P-201ENST00000476452 CHD1O14646 1710 aa10.21□□□□□ -0.78
RN7SL222P-201ENST00000476452 RIMBP3CA6NJZ7 1639 aa10.2□□□□□ -0.78
RN7SL222P-201ENST00000476452 RIMBP3BA6NNM3 1639 aa10.2□□□□□ -0.78
RN7SL222P-201ENST00000476452 RIMBP3Q9UFD9 1639 aa10.2□□□□□ -0.78
RN7SL222P-201ENST00000476452 CCDC88BA6NC98 1476 aa10.19□□□□□ -0.78
RN7SL222P-201ENST00000476452 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
RN7SL222P-201ENST00000476452 TOPBP1Q92547 1522 aa10.17□□□□□ -0.78
RN7SL222P-201ENST00000476452 DNMBPQ6XZF7 1577 aa10.17□□□□□ -0.78
RN7SL222P-201ENST00000476452 ZNF608Q9ULD9 1512 aaPredicted RBP10.17□□□□□ -0.78
RN7SL222P-201ENST00000476452 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
RN7SL222P-201ENST00000476452 IFT140Q96RY7 1462 aa10.14□□□□□ -0.79
RN7SL222P-201ENST00000476452 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
RN7SL222P-201ENST00000476452 ARHGEF11O15085 1522 aa10.1□□□□□ -0.79
RN7SL222P-201ENST00000476452 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
RN7SL222P-201ENST00000476452 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
RN7SL222P-201ENST00000476452 OSCARQ8IYS5 282 aa10.06□□□□□ -0.8
RN7SL222P-201ENST00000476452 PBRM1Q86U86 1689 aa10.05□□□□□ -0.8
RN7SL222P-201ENST00000476452 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.81
RN7SL222P-201ENST00000476452 CUX1P39880 1505 aa10.01□□□□□ -0.81
RN7SL222P-201ENST00000476452 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
RN7SL222P-201ENST00000476452 ARAP1Q96P48 1450 aa9.99□□□□□ -0.81
RN7SL222P-201ENST00000476452 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
RN7SL222P-201ENST00000476452 FGD5Q6ZNL6 1462 aa9.98□□□□□ -0.81
RN7SL222P-201ENST00000476452 ABCA5Q8WWZ7 1642 aa9.96□□□□□ -0.81
RN7SL222P-201ENST00000476452 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
RN7SL222P-201ENST00000476452 SYNJ1O43426 1573 aa9.93□□□□□ -0.82
RN7SL222P-201ENST00000476452 MAGI1Q96QZ7 1491 aaPredicted RBP9.92□□□□□ -0.82
RN7SL222P-201ENST00000476452 SOGA1O94964 1423 aa9.91□□□□□ -0.82
RN7SL222P-201ENST00000476452 BIVM-ERCC5R4GMW8 1640 aa9.91□□□□□ -0.82
RN7SL222P-201ENST00000476452 TDRD9Q8NDG6 1382 aaKnown RBP9.9□□□□□ -0.82
RN7SL222P-201ENST00000476452 SYNJ2O15056 1496 aa9.89□□□□□ -0.83
RN7SL222P-201ENST00000476452 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
RN7SL222P-201ENST00000476452 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
RN7SL222P-201ENST00000476452 ABCA10Q8WWZ4 1543 aa9.87□□□□□ -0.83
RN7SL222P-201ENST00000476452 TOP2BQ02880 1626 aa9.85□□□□□ -0.83
RN7SL222P-201ENST00000476452 SHROOM2Q13796 1616 aa9.85□□□□□ -0.83
RN7SL222P-201ENST00000476452 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
RN7SL222P-201ENST00000476452 CYB5RLQ6IPT4 315 aa9.84□□□□□ -0.83
RN7SL222P-201ENST00000476452 CEP170Q5SW79 1584 aa9.84□□□□□ -0.83
RN7SL222P-201ENST00000476452 ERCC6L2Q5T890 1561 aa9.84□□□□□ -0.83
RN7SL222P-201ENST00000476452 KIF13AQ9H1H9 1805 aa9.82□□□□□ -0.84
RN7SL222P-201ENST00000476452 FBLN2P98095 1184 aa9.82□□□□□ -0.84
RN7SL222P-201ENST00000476452 GRIN2AQ12879 1464 aa9.8□□□□□ -0.84
RN7SL222P-201ENST00000476452 NUP160Q12769 1436 aa9.76□□□□□ -0.85
RN7SL222P-201ENST00000476452 ERICH3Q5RHP9 1530 aa9.76□□□□□ -0.85
RN7SL222P-201ENST00000476452 RUSC2Q8N2Y8 1516 aa9.76□□□□□ -0.85
RN7SL222P-201ENST00000476452 CHMP7Q8WUX9 453 aaPredicted RBP9.75□□□□□ -0.85
RN7SL222P-201ENST00000476452 WRNQ14191 1432 aaPredicted RBP eCLIP9.73□□□□□ -0.85
RN7SL222P-201ENST00000476452 TRHP20396 242 aaPredicted RBP9.71□□□□□ -0.86
RN7SL222P-201ENST00000476452 FHAD1B1AJZ9 1412 aa9.7□□□□□ -0.86
RN7SL222P-201ENST00000476452 CUL7Q14999 1698 aa9.67□□□□□ -0.86
RN7SL222P-201ENST00000476452 ADCY10Q96PN6 1610 aa9.67□□□□□ -0.86
RN7SL222P-201ENST00000476452 SUPT5HO00267 1087 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms