RNA–Protein interactions for RNA: ENST00000476335.1

ELL3-204, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 452 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-204ENST00000476335 NISCHQ9Y2I1 1504 aa34.07■■■■□ 3.04
ELL3-204ENST00000476335 ABCC9O60706 1549 aa31.14■■■□□ 2.58
ELL3-204ENST00000476335 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
ELL3-204ENST00000476335 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.34
ELL3-204ENST00000476335 RB1CC1Q8TDY2 1594 aa29.45■■■□□ 2.31
ELL3-204ENST00000476335 NACADO15069 1562 aa29.16■■■□□ 2.26
ELL3-204ENST00000476335 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
ELL3-204ENST00000476335 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
ELL3-204ENST00000476335 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
ELL3-204ENST00000476335 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
ELL3-204ENST00000476335 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
ELL3-204ENST00000476335 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
ELL3-204ENST00000476335 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
ELL3-204ENST00000476335 CC2D2AQ9P2K1 1620 aa28.12■■■□□ 2.09
ELL3-204ENST00000476335 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
ELL3-204ENST00000476335 CECR2Q9BXF3 1484 aa28.1■■■□□ 2.09
ELL3-204ENST00000476335 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
ELL3-204ENST00000476335 EIF4G1Q04637 1599 aaKnown RBP27.96■■■□□ 2.07
ELL3-204ENST00000476335 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
ELL3-204ENST00000476335 CUX2O14529 1486 aa27.01■■□□□ 1.91
ELL3-204ENST00000476335 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
ELL3-204ENST00000476335 ERCC6Q03468 1493 aa26.89■■□□□ 1.9
ELL3-204ENST00000476335 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
ELL3-204ENST00000476335 HMGXB3Q12766 1538 aa26.7■■□□□ 1.86
ELL3-204ENST00000476335 SMARCA2P51531 1590 aa26.67■■□□□ 1.86
ELL3-204ENST00000476335 NESP48681 1621 aa26.66■■□□□ 1.86
ELL3-204ENST00000476335 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
ELL3-204ENST00000476335 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
ELL3-204ENST00000476335 THOC2Q8NI27 1593 aaKnown RBP26.47■■□□□ 1.83
ELL3-204ENST00000476335 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
ELL3-204ENST00000476335 PEG3Q9GZU2 1588 aa26.42■■□□□ 1.82
ELL3-204ENST00000476335 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
ELL3-204ENST00000476335 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
ELL3-204ENST00000476335 MROH2BQ7Z745 1585 aa26.25■■□□□ 1.79
ELL3-204ENST00000476335 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
ELL3-204ENST00000476335 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
ELL3-204ENST00000476335 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
ELL3-204ENST00000476335 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
ELL3-204ENST00000476335 WDR62O43379 1518 aa26.01■■□□□ 1.75
ELL3-204ENST00000476335 WIZO95785 1651 aa25.9■■□□□ 1.74
ELL3-204ENST00000476335 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
ELL3-204ENST00000476335 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
ELL3-204ENST00000476335 CFTRP13569 1480 aa25.72■■□□□ 1.71
ELL3-204ENST00000476335 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
ELL3-204ENST00000476335 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
ELL3-204ENST00000476335 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
ELL3-204ENST00000476335 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
ELL3-204ENST00000476335 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
ELL3-204ENST00000476335 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
ELL3-204ENST00000476335 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
ELL3-204ENST00000476335 PRDM2Q13029 1718 aa25.39■■□□□ 1.65
ELL3-204ENST00000476335 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
ELL3-204ENST00000476335 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
ELL3-204ENST00000476335 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
ELL3-204ENST00000476335 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
ELL3-204ENST00000476335 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
ELL3-204ENST00000476335 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
ELL3-204ENST00000476335 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
ELL3-204ENST00000476335 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
ELL3-204ENST00000476335 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
ELL3-204ENST00000476335 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.61
ELL3-204ENST00000476335 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
ELL3-204ENST00000476335 CHD1O14646 1710 aa25.08■■□□□ 1.61
ELL3-204ENST00000476335 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
ELL3-204ENST00000476335 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
ELL3-204ENST00000476335 TRHP20396 242 aaPredicted RBP24.95■■□□□ 1.58
ELL3-204ENST00000476335 FBLN2P98095 1184 aa24.95■■□□□ 1.58
ELL3-204ENST00000476335 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
ELL3-204ENST00000476335 TDRD9Q8NDG6 1382 aaKnown RBP24.86■■□□□ 1.57
ELL3-204ENST00000476335 SOGA1O94964 1423 aa24.85■■□□□ 1.57
ELL3-204ENST00000476335 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
ELL3-204ENST00000476335 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
ELL3-204ENST00000476335 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
ELL3-204ENST00000476335 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
ELL3-204ENST00000476335 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
ELL3-204ENST00000476335 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
ELL3-204ENST00000476335 CHMP7Q8WUX9 453 aaPredicted RBP24.72■■□□□ 1.55
ELL3-204ENST00000476335 CUX1P39880 1505 aa24.69■■□□□ 1.54
ELL3-204ENST00000476335 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
ELL3-204ENST00000476335 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
ELL3-204ENST00000476335 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
ELL3-204ENST00000476335 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
ELL3-204ENST00000476335 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
ELL3-204ENST00000476335 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
ELL3-204ENST00000476335 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
ELL3-204ENST00000476335 ERCC6L2Q5T890 1561 aa24.41■■□□□ 1.5
ELL3-204ENST00000476335 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
ELL3-204ENST00000476335 NUP160Q12769 1436 aa24.32■■□□□ 1.48
ELL3-204ENST00000476335 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
ELL3-204ENST00000476335 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
ELL3-204ENST00000476335 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
ELL3-204ENST00000476335 SHROOM2Q13796 1616 aa24.26■■□□□ 1.47
ELL3-204ENST00000476335 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
ELL3-204ENST00000476335 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
ELL3-204ENST00000476335 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
ELL3-204ENST00000476335 KIF13AQ9H1H9 1805 aa24.15■■□□□ 1.46
ELL3-204ENST00000476335 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
ELL3-204ENST00000476335 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
ELL3-204ENST00000476335 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
ELL3-204ENST00000476335 JPH4Q96JJ6 628 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms