RNA–Protein interactions for RNA: ENST00000476331.5

TMEM40-206, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-206ENST00000476331 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
TMEM40-206ENST00000476331 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
TMEM40-206ENST00000476331 ABCC9O60706 1549 aa22.77■■□□□ 1.24
TMEM40-206ENST00000476331 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
TMEM40-206ENST00000476331 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
TMEM40-206ENST00000476331 NACADO15069 1562 aa21.94■■□□□ 1.1
TMEM40-206ENST00000476331 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
TMEM40-206ENST00000476331 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
TMEM40-206ENST00000476331 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
TMEM40-206ENST00000476331 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
TMEM40-206ENST00000476331 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
TMEM40-206ENST00000476331 SCRIBQ14160 1630 aa21.33■■□□□ 1.01
TMEM40-206ENST00000476331 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
TMEM40-206ENST00000476331 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
TMEM40-206ENST00000476331 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
TMEM40-206ENST00000476331 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
TMEM40-206ENST00000476331 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
TMEM40-206ENST00000476331 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
TMEM40-206ENST00000476331 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
TMEM40-206ENST00000476331 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
TMEM40-206ENST00000476331 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
TMEM40-206ENST00000476331 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
TMEM40-206ENST00000476331 ATAD2BQ9ULI0 1458 aa20.25■□□□□ 0.83
TMEM40-206ENST00000476331 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
TMEM40-206ENST00000476331 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
TMEM40-206ENST00000476331 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
TMEM40-206ENST00000476331 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
TMEM40-206ENST00000476331 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
TMEM40-206ENST00000476331 WIZO95785 1651 aa20.04■□□□□ 0.8
TMEM40-206ENST00000476331 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
TMEM40-206ENST00000476331 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
TMEM40-206ENST00000476331 NESP48681 1621 aa19.71■□□□□ 0.75
TMEM40-206ENST00000476331 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
TMEM40-206ENST00000476331 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
TMEM40-206ENST00000476331 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
TMEM40-206ENST00000476331 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
TMEM40-206ENST00000476331 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
TMEM40-206ENST00000476331 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
TMEM40-206ENST00000476331 CFTRP13569 1480 aa19.55■□□□□ 0.72
TMEM40-206ENST00000476331 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
TMEM40-206ENST00000476331 FANCD2Q9BXW9 1451 aa19.43■□□□□ 0.7
TMEM40-206ENST00000476331 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
TMEM40-206ENST00000476331 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
TMEM40-206ENST00000476331 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
TMEM40-206ENST00000476331 CUX2O14529 1486 aa19.4■□□□□ 0.7
TMEM40-206ENST00000476331 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
TMEM40-206ENST00000476331 WDR62O43379 1518 aa19.3■□□□□ 0.68
TMEM40-206ENST00000476331 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
TMEM40-206ENST00000476331 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
TMEM40-206ENST00000476331 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
TMEM40-206ENST00000476331 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
TMEM40-206ENST00000476331 CUX1P39880 1505 aa19■□□□□ 0.63
TMEM40-206ENST00000476331 IFT140Q96RY7 1462 aa19■□□□□ 0.63
TMEM40-206ENST00000476331 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
TMEM40-206ENST00000476331 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
TMEM40-206ENST00000476331 WRNQ14191 1432 aaPredicted RBP eCLIP18.94■□□□□ 0.62
TMEM40-206ENST00000476331 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
TMEM40-206ENST00000476331 SOGA1O94964 1423 aa18.89■□□□□ 0.61
TMEM40-206ENST00000476331 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
TMEM40-206ENST00000476331 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
TMEM40-206ENST00000476331 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
TMEM40-206ENST00000476331 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
TMEM40-206ENST00000476331 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
TMEM40-206ENST00000476331 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
TMEM40-206ENST00000476331 EIF4G3O43432 1585 aaKnown RBP18.85■□□□□ 0.61
TMEM40-206ENST00000476331 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
TMEM40-206ENST00000476331 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
TMEM40-206ENST00000476331 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
TMEM40-206ENST00000476331 ABCA10Q8WWZ4 1543 aa18.76■□□□□ 0.59
TMEM40-206ENST00000476331 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
TMEM40-206ENST00000476331 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
TMEM40-206ENST00000476331 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
TMEM40-206ENST00000476331 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
TMEM40-206ENST00000476331 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
TMEM40-206ENST00000476331 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
TMEM40-206ENST00000476331 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
TMEM40-206ENST00000476331 CHD1O14646 1710 aa18.57■□□□□ 0.56
TMEM40-206ENST00000476331 FBLN2P98095 1184 aa18.57■□□□□ 0.56
TMEM40-206ENST00000476331 ERICH3Q5RHP9 1530 aa18.55■□□□□ 0.56
TMEM40-206ENST00000476331 SYNJ2O15056 1496 aa18.55■□□□□ 0.56
TMEM40-206ENST00000476331 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
TMEM40-206ENST00000476331 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
TMEM40-206ENST00000476331 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
TMEM40-206ENST00000476331 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
TMEM40-206ENST00000476331 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
TMEM40-206ENST00000476331 CUL7Q14999 1698 aa18.41■□□□□ 0.54
TMEM40-206ENST00000476331 IGF1RP08069 1367 aa18.41■□□□□ 0.54
TMEM40-206ENST00000476331 CLASP1Q7Z460 1538 aa18.37■□□□□ 0.53
TMEM40-206ENST00000476331 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
TMEM40-206ENST00000476331 NUP160Q12769 1436 aa18.34■□□□□ 0.53
TMEM40-206ENST00000476331 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
TMEM40-206ENST00000476331 CEP170Q5SW79 1584 aa18.33■□□□□ 0.52
TMEM40-206ENST00000476331 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
TMEM40-206ENST00000476331 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
TMEM40-206ENST00000476331 RIMBP3CA6NJZ7 1639 aa18.3■□□□□ 0.52
TMEM40-206ENST00000476331 RIMBP3BA6NNM3 1639 aa18.3■□□□□ 0.52
TMEM40-206ENST00000476331 RIMBP3Q9UFD9 1639 aa18.3■□□□□ 0.52
TMEM40-206ENST00000476331 EEA1Q15075 1411 aa18.25■□□□□ 0.51
TMEM40-206ENST00000476331 RAPGEF2Q9Y4G8 1499 aa18.24■□□□□ 0.51
TMEM40-206ENST00000476331 SHROOM2Q13796 1616 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms